RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 RNF38Q9H0F5 515 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 ATG10Q9H0Y0 220 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 SMURF1Q9HCE7 757 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 NMRK2Q9NPI5 230 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 TAS2R9Q9NYW1 312 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 CNOT2Q9NZN8 540 aaKnown RBP9.8□□□□□ -0.84
CCDC36-201ENST00000296449 BRCA2P51587 3418 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 EFCAB10A6NFE3 127 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 A8MV72 311 aaPredicted RBP9.8□□□□□ -0.84
CCDC36-201ENST00000296449 C8GP07360 202 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 POLR2EP19388 210 aaKnown RBP9.8□□□□□ -0.84
CCDC36-201ENST00000296449 CSKP41240 450 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 RACK1P63244 317 aaKnown RBP9.8□□□□□ -0.84
CCDC36-201ENST00000296449 ACSM2AQ08AH3 577 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 TEAD4Q15561 434 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 ZFP69Q49AA0 526 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 CPTPQ5TA50 214 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 ACSM2BQ68CK6 577 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 CBARPQ8N350 705 aaPredicted RBP9.8□□□□□ -0.84
CCDC36-201ENST00000296449 SIMC1Q8NDZ2 872 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 WFDC5Q8TCV5 224 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 C11orf24Q96F05 449 aaPredicted RBP9.8□□□□□ -0.84
CCDC36-201ENST00000296449 TRNT1Q96Q11 434 aaKnown RBP9.8□□□□□ -0.84
CCDC36-201ENST00000296449 BBS2Q9BXC9 721 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 MARCH5Q9NX47 278 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 ZDHHC3Q9NYG2 299 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 TBC1D14Q9P2M4 693 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 MUTYHQ9UIF7 546 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 BTNL2Q9UIR0 455 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 GABRQQ9UN88 632 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 RUVBL1Q9Y265 456 aaKnown RBP9.8□□□□□ -0.84
CCDC36-201ENST00000296449 FRMPD3Q5JV73 1810 aa9.8□□□□□ -0.84
CCDC36-201ENST00000296449 SH3D21A4FU49 640 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 NDUFB5O43674 189 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 CYP7B1O75881 506 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 CYBAP13498 195 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 POU2F1P14859 743 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 MVDP53602 400 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 CASP9P55211 416 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 PFN3P60673 137 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 MRPS15P82914 257 aaKnown RBP9.79□□□□□ -0.84
CCDC36-201ENST00000296449 SMARCB1Q12824 385 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 CAMK2BQ13554 666 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 DDX39BQ13838 428 aaKnown RBP9.79□□□□□ -0.84
CCDC36-201ENST00000296449 CDK10Q15131 360 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 ATP13A5Q4VNC0 1218 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 IFI44LQ53G44 452 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 ZMAT1Q5H9K5 638 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 RNF130Q86XS8 419 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 BBS7Q8IWZ6 715 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 NPAS3Q8IXF0 933 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 WDR20Q8TBZ3 569 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 ALG14Q96F25 216 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 DMRTB1Q96MA1 342 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 ARPC5LQ9BPX5 153 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 BARHL1Q9BZE3 327 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 DYRK4Q9NR20 520 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 ASAH2Q9NR71 780 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 GPATCH2Q9NW75 528 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 SPATA6Q9NWH7 488 aaPredicted RBP9.79□□□□□ -0.84
CCDC36-201ENST00000296449 HCSTQ9UBK5 93 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 V9GYH0 126 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 NPIPB15A6NHN6 443 aaPredicted RBP9.79□□□□□ -0.84
CCDC36-201ENST00000296449 CENPXA8MT69 81 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 J3KTA2 159 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 ADAM12O43184 909 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 ETFAP13804 333 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 ITGA2P17301 1181 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 RPS19P39019 145 aaKnown RBP9.79□□□□□ -0.84
CCDC36-201ENST00000296449 ALDH9A1P49189 494 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 RAE1P78406 368 aaKnown RBP9.79□□□□□ -0.84
CCDC36-201ENST00000296449 IRF8Q02556 426 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 ELOAQ14241 798 aaKnown RBP9.79□□□□□ -0.84
CCDC36-201ENST00000296449 MBTPS1Q14703 1052 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 PTGES3Q15185 160 aaKnown RBP9.79□□□□□ -0.84
CCDC36-201ENST00000296449 CYP27C1Q4G0S4 372 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 COX20Q5RI15 118 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 PLAG1Q6DJT9 500 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 PRSS55Q6UWB4 352 aaPredicted RBP9.79□□□□□ -0.84
CCDC36-201ENST00000296449 VN1R5Q7Z5H4 357 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 NLRP8Q86W28 1048 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 WDR36Q8NI36 951 aaKnown RBP9.79□□□□□ -0.84
CCDC36-201ENST00000296449 ASB15Q8WXK1 588 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 GTPBP3Q969Y2 492 aaKnown RBP9.79□□□□□ -0.84
CCDC36-201ENST00000296449 METTL2AQ96IZ6 378 aaKnown RBP9.79□□□□□ -0.84
CCDC36-201ENST00000296449 OPALINQ96PE5 141 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 ZNF556Q9HAH1 456 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 OGDHLQ9ULD0 1010 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 BOLA1Q9Y3E2 137 aa9.79□□□□□ -0.84
CCDC36-201ENST00000296449 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.78□□□□□ -0.84
CCDC36-201ENST00000296449 SLC35F4A4IF30 521 aa9.78□□□□□ -0.84
CCDC36-201ENST00000296449 H3BM21 787 aa9.78□□□□□ -0.84
CCDC36-201ENST00000296449 GFYI3L273 518 aa9.78□□□□□ -0.84
CCDC36-201ENST00000296449 PCDH17O14917 1159 aa9.78□□□□□ -0.84
CCDC36-201ENST00000296449 RGS5O15539 181 aa9.78□□□□□ -0.84
CCDC36-201ENST00000296449 ADAMTS4O75173 837 aa9.78□□□□□ -0.84
CCDC36-201ENST00000296449 ETHE1O95571 254 aa9.78□□□□□ -0.84
CCDC36-201ENST00000296449 CRATP43155 626 aa9.78□□□□□ -0.84
CCDC36-201ENST00000296449 RPS5P46782 204 aaKnown RBP9.78□□□□□ -0.84
CCDC36-201ENST00000296449 CDC42P60953 191 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms