RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 NFATC4Q14934 902 aa15.64■□□□□ 0.09
SSRP1-202ENST00000293880 PRAMEF14Q5SWL7 426 aa15.64■□□□□ 0.09
SSRP1-202ENST00000293880 PRAMEF13Q5VWM6 474 aa15.64■□□□□ 0.09
SSRP1-202ENST00000293880 GTF2IRD2BQ6EKJ0 949 aa15.64■□□□□ 0.09
SSRP1-202ENST00000293880 GTF2IRD2Q86UP8 949 aa15.64■□□□□ 0.09
SSRP1-202ENST00000293880 ASCC1Q8N9N2 400 aaKnown RBP15.64■□□□□ 0.09
SSRP1-202ENST00000293880 RGMAQ96B86 450 aa15.64■□□□□ 0.09
SSRP1-202ENST00000293880 HSPA12BQ96MM6 686 aa15.64■□□□□ 0.09
SSRP1-202ENST00000293880 EIF2B3Q9NR50 452 aaKnown RBP15.64■□□□□ 0.09
SSRP1-202ENST00000293880 SPATA7Q9P0W8 599 aa15.64■□□□□ 0.09
SSRP1-202ENST00000293880 TMED5Q9Y3A6 229 aa15.64■□□□□ 0.09
SSRP1-202ENST00000293880 B4GALT2O60909 372 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 GKP32189 559 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 KCNJ5P48544 419 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 RAB5BP61020 215 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 PTP4A2Q12974 167 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 EPGNQ6UW88 154 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 GLB1L3Q8NCI6 653 aaPredicted RBP15.63■□□□□ 0.09
SSRP1-202ENST00000293880 ACBD6Q9BR61 282 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 SMG9Q9H0W8 520 aaKnown RBP15.63■□□□□ 0.09
SSRP1-202ENST00000293880 MTMR10Q9NXD2 777 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 ATXN7L1Q9ULK2 861 aaPredicted RBP15.63■□□□□ 0.09
SSRP1-202ENST00000293880 ZNF705FA8MVS1 300 aaPredicted RBP15.63■□□□□ 0.09
SSRP1-202ENST00000293880 MANBAO00462 879 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 KCNJ13O60928 360 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 ZNF705DP0CH99 300 aaPredicted RBP15.63■□□□□ 0.09
SSRP1-202ENST00000293880 ZNF705BP0CI00 300 aaPredicted RBP15.63■□□□□ 0.09
SSRP1-202ENST00000293880 SOX2P48431 317 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 FBXO22Q8NEZ5 403 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 FAM163AQ96GL9 167 aaPredicted RBP15.63■□□□□ 0.09
SSRP1-202ENST00000293880 CAPNS2Q96L46 248 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 TMEM185BQ9H7F4 350 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 ERVW-1Q9UQF0 538 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 MAFBQ9Y5Q3 323 aaPredicted RBP15.63■□□□□ 0.09
SSRP1-202ENST00000293880 PTGDR2Q9Y5Y4 395 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 ADGRB1O14514 1584 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 RBM47A0AV96 593 aaKnown RBP15.63■□□□□ 0.09
SSRP1-202ENST00000293880 SCDO00767 359 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 HOXC6P09630 235 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 ZNF182P17025 639 aaPredicted RBP15.63■□□□□ 0.09
SSRP1-202ENST00000293880 STT3AP46977 705 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 GNG2P59768 71 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 NOXRED1Q6NXP6 359 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 SLC30A8Q8IWU4 369 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 TTYH3Q9C0H2 523 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 RETREG1Q9H6L5 497 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 OR2S2Q9NQN1 319 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 CREG1O75629 220 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 ANXA8P13928 327 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 GSK3BP49841 420 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 EEFSECP57772 596 aaKnown RBP15.63■□□□□ 0.09
SSRP1-202ENST00000293880 TAS2R50P59544 299 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 KCNC4Q03721 635 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 C2orf76Q3KRA6 126 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 C2orf27AQ580R0 203 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 SLC24A5Q71RS6 500 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 ZNF527Q8NB42 609 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 OR6Q1Q8NGQ2 317 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 ARNTL2Q8WYA1 636 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 ACOT12Q8WYK0 555 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 ANKHQ9HCJ1 492 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 MAN2C1Q9NTJ4 1040 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 LAMP5Q9UJQ1 280 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 CFL2Q9Y281 166 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 CPED1A4D0V7 1026 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 LCKP06239 509 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 HTR1AP08908 422 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 ALPPL2P10696 532 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 ENTPD1P49961 510 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 SSTP61278 116 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 RAB39AQ14964 217 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 NUDT13Q86X67 352 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 SHKBP1Q8TBC3 707 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 TRIB2Q92519 343 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 TMEM109Q9BVC6 243 aa15.63■□□□□ 0.09
SSRP1-202ENST00000293880 A0A1W2PPW3 197 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 C11orf98E9PRG8 122 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 DLX3O60479 287 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 ZNF254O75437 659 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 UNGP13051 313 aaPredicted RBP15.62■□□□□ 0.09
SSRP1-202ENST00000293880 FKBP1CQ5VVH2 108 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 HMGB4Q8WW32 186 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 ERVK-18Q9QC07 812 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 PGGT1BP53609 377 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 FUT2Q10981 343 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 LIPKQ5VXJ0 399 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 SLC36A4Q6YBV0 504 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 OR4E2Q8NGC2 313 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 TM9SF3Q9HD45 589 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 FZD3Q9NPG1 666 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 HEBP2Q9Y5Z4 205 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 KAT7O95251 611 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 OC90Q02509 493 aaPredicted RBP15.62■□□□□ 0.09
SSRP1-202ENST00000293880 KRTCAP2Q8N6L1 136 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 DDX1Q92499 740 aaKnown RBP15.62■□□□□ 0.09
SSRP1-202ENST00000293880 PCBD2Q9H0N5 130 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 OR51B5Q9H339 312 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 OTOL1A6NHN0 477 aaPredicted RBP15.62■□□□□ 0.09
SSRP1-202ENST00000293880 NUDT7P0C024 238 aa15.62■□□□□ 0.09
SSRP1-202ENST00000293880 CDH11P55287 796 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms