RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 HSD11B2P80365 405 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 HERC3Q15034 1050 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 TMEM35AQ53FP2 167 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 SNAP47Q5SQN1 464 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 KMT5CQ86Y97 462 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 MCATQ8IVS2 390 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 METTL4Q8N3J2 472 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 C1orf52Q8N6N3 182 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 NT5CQ8TCD5 201 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 KLHL29Q96CT2 875 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 FCRL1Q96LA6 429 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 BRINP2Q9C0B6 783 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 SLC6A16Q9GZN6 736 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 SOHLH2Q9NX45 425 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 SIRT5Q9NXA8 310 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 AHSPQ9NZD4 102 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 RUVBL1Q9Y265 456 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 WDR87Q6ZQQ6 2873 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 LOC100653049A0A140TA62 436 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 PSMD12O00232 456 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 NTN3O00634 580 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 HCRTR1O43613 425 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 GDF9O60383 454 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 SRPX2O60687 465 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 KRT34O76011 436 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 STATHP02808 62 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 SLC35G6P0C7Q6 338 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 MAPK1P28482 360 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 PTPN4P29074 926 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 MLLT3P42568 568 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 RGS1Q08116 209 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 MANEAQ5SRI9 462 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 NOXRED1Q6NXP6 359 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 CAMKVQ8NCB2 501 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 KLHL6Q8WZ60 621 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 SLC41A2Q96JW4 573 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 GFM1Q96RP9 751 aaKnown RBP18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 AICDAQ9GZX7 198 aa18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 POLR3HQ9Y535 204 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-202ENST00000284770 A8MU76 341 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 PLPP1O14494 284 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 MYO1DO94832 1006 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 THRAP10827 490 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 GABRA4P48169 554 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 ARL4DP49703 201 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 ACADVLP49748 655 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 SEPHS1P49903 392 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 STX1BP61266 288 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 STXBP1P61764 594 aaKnown RBP18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 RPS6KA2Q15349 733 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 GALNT18Q6P9A2 607 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 RINLQ6ZS11 566 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 COMMD6Q7Z4G1 85 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 ZNF655Q8N720 491 aaPredicted RBP18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 FBXO27Q8NI29 283 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 RP9Q8TA86 221 aaKnown RBP18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 RGMAQ96B86 450 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 MS4A6EQ96DS6 147 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 CDC6Q99741 560 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 KLHL31Q9H511 634 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 ZNF768Q9H5H4 540 aaKnown RBP18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 SYNDIG1Q9H7V2 258 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 TAS2R1Q9NYW7 299 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 DLGAP4Q9Y2H0 992 aa18.02■□□□□ 0.48
PDLIM3-202ENST00000284770 UNC13CQ8NB66 2214 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 P2RX6O15547 441 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 ANKRD34CP0C6C1 535 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 G6PDP11413 515 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 PRPS2P11908 318 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 BCKDHAP12694 445 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 NELFEP18615 380 aaKnown RBP18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 RAP1GDS1P52306 607 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 ARFIP1P53367 373 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 VSX2P58304 361 aaPredicted RBP18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 RAE1P78406 368 aaKnown RBP18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 DEFB110Q30KQ9 67 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 PAOXQ6QHF9 649 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 CYP20A1Q6UW02 462 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 UBE3DQ7Z6J8 389 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 SNX32Q86XE0 403 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 FUNDC1Q8IVP5 155 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 MIER2Q8N344 545 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 D2HGDHQ8N465 521 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 LIX1Q8N485 282 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 KIF2BQ8N4N8 673 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 KCT2Q8NC54 265 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 SRFBP1Q8NEF9 429 aaKnown RBP18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 OR2L5Q8NG80 312 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 OR9I1Q8NGQ6 314 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 BTBD10Q9BSF8 475 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 ZNF717Q9BY31 904 aaPredicted RBP18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 PLCL2Q9UPR0 1127 aa18.02■□□□□ 0.47
PDLIM3-202ENST00000284770 ASCC3Q8N3C0 2202 aaKnown RBP18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 IGHV5-10-1A0A0J9YXX1 117 aa18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 B2RBV5 119 aa18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 ZSCAN9O15535 394 aaPredicted RBP18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 EIF2S1P05198 315 aaKnown RBP18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 PCSK2P16519 638 aa18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 TIA1P31483 386 aaKnown RBP eCLIP18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 MNAT1P51948 309 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms