RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 C22orf39Q6P5X5 142 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 ZNF621Q6ZSS3 439 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 GALNT5Q7Z7M9 940 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 ZNF540Q8NDQ6 660 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 TTC16Q8NEE8 873 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 SKA2Q8WVK7 121 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-201ENST00000277198 MRPS31Q92665 395 aaKnown RBP12.44□□□□□ -0.42
C9orf3-201ENST00000277198 HSH2DQ96JZ2 352 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 LMLNQ96KR4 655 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 GABARAPL3Q9BY60 117 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 ACOT13Q9NPJ3 140 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 RAD18Q9NS91 495 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 ATAD3AQ9NVI7 634 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 ADPRHL2Q9NX46 363 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 KIF17Q9P2E2 1029 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 PADI2Q9Y2J8 665 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 PCDHGB3Q9Y5G1 929 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 OBSL1O75147 1896 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 WDR87Q6ZQQ6 2873 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 A8MX80 341 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 PRAMEF4O60810 478 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 LRATO95237 230 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 GSTM1P09488 218 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 FMO3P31513 532 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 CD70P32970 193 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 SOX9P48436 509 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 TUBA1BP68363 451 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 TEKQ02763 1124 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 ACSM2AQ08AH3 577 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 TCF15Q12870 199 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 NPRL3Q12980 569 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 MLF2Q15773 248 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-201ENST00000277198 ADPRMQ3LIE5 342 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 ARHGAP15Q53QZ3 475 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 LDLRAP1Q5SW96 308 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 C10orf62Q5T681 223 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-201ENST00000277198 UBE2UQ5VVX9 321 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 PRAMEF9Q5VWM5 478 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 ACSM2BQ68CK6 577 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 TUBA1AQ71U36 451 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 CMTM8Q8IZV2 173 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 DYNC2LI1Q8TCX1 351 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 CXorf40BQ96DE9 158 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 HRASLS5Q96KN8 279 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 ALPK1Q96QP1 1244 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 PHOX2BQ99453 314 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 TRMT61BQ9BVS5 477 aaKnown RBP12.43□□□□□ -0.42
C9orf3-201ENST00000277198 BRD9Q9H8M2 597 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 TPT1P8Q9HAU6 139 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 THUMPD1Q9NXG2 353 aaKnown RBP12.43□□□□□ -0.42
C9orf3-201ENST00000277198 SELENONQ9NZV5 590 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 NFKBIL1Q9UBC1 381 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-201ENST00000277198 PAIP2BQ9ULR5 123 aaKnown RBP12.43□□□□□ -0.42
C9orf3-201ENST00000277198 DGKBQ9Y6T7 804 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 A8MVJ9 347 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 SCAMP2O15127 329 aaKnown RBP12.43□□□□□ -0.42
C9orf3-201ENST00000277198 SERPINB7O75635 380 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 C1SP09871 688 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 PSMD7P51665 324 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 PNLIPRP1P54315 467 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 IQCCQ4KMZ1 466 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 GRHL2Q6ISB3 625 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 BBS7Q8IWZ6 715 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 ATG16L2Q8NAA4 619 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 OR6Q1Q8NGQ2 317 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 GLMNQ92990 594 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 BHMTQ93088 406 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 PYCR2Q96C36 320 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 C7orf34Q96L11 122 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 BARD1Q99728 777 aaKnown RBP12.43□□□□□ -0.42
C9orf3-201ENST00000277198 NEURL2Q9BR09 285 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 DUSP26Q9BV47 211 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 CHST8Q9H2A9 424 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 PLCXD1Q9NUJ7 323 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 EXD2Q9NVH0 621 aa12.43□□□□□ -0.42
C9orf3-201ENST00000277198 SUV39H1O43463 412 aa12.42□□□□□ -0.42
C9orf3-201ENST00000277198 FAM20BO75063 409 aa12.42□□□□□ -0.42
C9orf3-201ENST00000277198 PSIP1O75475 530 aaKnown RBP12.42□□□□□ -0.42
C9orf3-201ENST00000277198 NADKO95544 446 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-201ENST00000277198 RPP38P78345 283 aaKnown RBP12.42□□□□□ -0.42
C9orf3-201ENST00000277198 CBX3Q13185 183 aa12.42□□□□□ -0.42
C9orf3-201ENST00000277198 CAMK2GQ13555 558 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-201ENST00000277198 E2F2Q14209 437 aa12.42□□□□□ -0.42
C9orf3-201ENST00000277198 HIST2H2ACQ16777 129 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-201ENST00000277198 SPIN4Q56A73 249 aa12.42□□□□□ -0.42
C9orf3-201ENST00000277198 BRAT1Q6PJG6 821 aa12.42□□□□□ -0.42
C9orf3-201ENST00000277198 ADCK1Q86TW2 530 aa12.42□□□□□ -0.42
C9orf3-201ENST00000277198 VRK3Q8IV63 474 aa12.42□□□□□ -0.42
C9orf3-201ENST00000277198 ZNF557Q8N988 423 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-201ENST00000277198 COQ8BQ96D53 544 aa12.42□□□□□ -0.42
C9orf3-201ENST00000277198 FAM86C1Q9NVL1 165 aa12.42□□□□□ -0.42
C9orf3-201ENST00000277198 CFAP97Q9P2B7 532 aa12.42□□□□□ -0.42
C9orf3-201ENST00000277198 ZNF282Q9UDV7 671 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-201ENST00000277198 TMPRSS11EQ9UL52 423 aa12.42□□□□□ -0.42
C9orf3-201ENST00000277198 CLEC4EQ9ULY5 219 aa12.42□□□□□ -0.42
C9orf3-201ENST00000277198 A3GALT2U3KPV4 340 aa12.42□□□□□ -0.42
C9orf3-201ENST00000277198 COL4A2P08572 1712 aa12.42□□□□□ -0.42
C9orf3-201ENST00000277198 C1orf226A1L170 272 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 OR2A25A4D2G3 310 aa12.41□□□□□ -0.42
C9orf3-201ENST00000277198 OTOL1A6NHN0 477 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms