RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 AP2S1P53680 142 aaPredicted RBP12.36□□□□□ -0.43
HERC6-202ENST00000273960 MRPS6P82932 125 aaKnown RBP12.36□□□□□ -0.43
HERC6-202ENST00000273960 MGAT3Q09327 533 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 LRRC74AQ0VAA2 488 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 TIGD7Q6NT04 549 aaPredicted RBP12.36□□□□□ -0.43
HERC6-202ENST00000273960 PIH1D2Q8WWB5 315 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 DPF3Q92784 378 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 PPP3R2Q96LZ3 170 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 TM9SF2Q99805 663 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 TRAF4Q9BUZ4 470 aaPredicted RBP12.36□□□□□ -0.43
HERC6-202ENST00000273960 ZNF556Q9HAH1 456 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 PADI3Q9ULW8 664 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 SPATA2Q9UM82 520 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 HS3ST4Q9Y661 456 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 CFAP20Q9Y6A4 193 aaKnown RBP12.36□□□□□ -0.43
HERC6-202ENST00000273960 KCNE2Q9Y6J6 123 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 MN1Q10571 1320 aaPredicted RBP12.36□□□□□ -0.43
HERC6-202ENST00000273960 FPGTO14772 594 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 ADAMDEC1O15204 470 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 MMP2P08253 660 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 CTRB1P17538 263 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 PBX3P40426 434 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 PNPLA4P41247 253 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 MAB21L1Q13394 359 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 FCN2Q15485 313 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 EXOC3L2Q2M3D2 409 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 BCL2L15Q5TBC7 163 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 LCN1P1Q5VSP4 162 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 CTRB2Q6GPI1 263 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 ARSKQ6UWY0 536 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 CPA6Q8N4T0 437 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 CPPED1Q9BRF8 314 aaPredicted RBP12.36□□□□□ -0.43
HERC6-202ENST00000273960 NXF2Q9GZY0 626 aaKnown RBP12.36□□□□□ -0.43
HERC6-202ENST00000273960 MRM3Q9HC36 420 aaKnown RBP12.36□□□□□ -0.43
HERC6-202ENST00000273960 H3BN98 237 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 MYL12BO14950 172 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 SLC22A5O76082 557 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 WISP3O95389 354 aaPredicted RBP12.36□□□□□ -0.43
HERC6-202ENST00000273960 MYL12AP19105 171 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 PRIM2P49643 509 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 PSPHP78330 225 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 PURAQ00577 322 aaKnown RBP12.36□□□□□ -0.43
HERC6-202ENST00000273960 GRIK2Q13002 908 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 SLC39A12Q504Y0 691 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 FAM180BQ6P0A1 224 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 LIPIQ6XZB0 460 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 KRT74Q7RTS7 529 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 ADAMTSL2Q86TH1 951 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 SELENOMQ8WWX9 145 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 MYLPFQ96A32 169 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 UPRTQ96BW1 309 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 TRIP12Q14669 1992 aaPredicted RBP12.36□□□□□ -0.43
HERC6-202ENST00000273960 MKI67P46013 3256 aaKnown RBP12.35□□□□□ -0.43
HERC6-202ENST00000273960 MYO7AQ13402 2215 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 LOC105369274A0A096LPK9 316 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 ARL5CA6NH57 179 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 PIRO00625 290 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 PTGESO14684 152 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 CCNDBP1O95273 360 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 PRKAR2AP13861 404 aaKnown RBP12.35□□□□□ -0.43
HERC6-202ENST00000273960 PKMP14618 531 aaKnown RBP12.35□□□□□ -0.43
HERC6-202ENST00000273960 MC4RP32245 332 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 GGT2P36268 569 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 RPS14P62263 151 aaKnown RBP12.35□□□□□ -0.43
HERC6-202ENST00000273960 CDC42EP1Q00587 391 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 KIAA0040Q15053 153 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.35□□□□□ -0.43
HERC6-202ENST00000273960 SLC35F1Q5T1Q4 408 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 SHFQ7M4L6 423 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 MEX3DQ86XN8 651 aaKnown RBP12.35□□□□□ -0.43
HERC6-202ENST00000273960 KRT73Q86Y46 540 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 OR4N4Q8N0Y3 316 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 TESCQ96BS2 214 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 HRASLS5Q96KN8 279 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 AIFM2Q9BRQ8 373 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 PPIEQ9UNP9 301 aaKnown RBP12.35□□□□□ -0.43
HERC6-202ENST00000273960 AP3M1Q9Y2T2 418 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 MROH6A6NGR9 719 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 MANSC4A6NHS7 340 aaPredicted RBP12.35□□□□□ -0.43
HERC6-202ENST00000273960 GABRDO14764 452 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 PCDH17O14917 1159 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 IL6P05231 212 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 ATXN1LP0C7T5 689 aaKnown RBP12.35□□□□□ -0.43
HERC6-202ENST00000273960 M6PRP20645 277 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 CNR2P34972 360 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 AVPR1BP47901 424 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 PPIGQ13427 754 aaKnown RBP eCLIP12.35□□□□□ -0.43
HERC6-202ENST00000273960 LARS2Q15031 903 aaKnown RBP12.35□□□□□ -0.43
HERC6-202ENST00000273960 KCNA10Q16322 511 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 TIMM50Q3ZCQ8 353 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 GARNL3Q5VVW2 1013 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 ZNF767PQ75MW2 155 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 PLCZ1Q86YW0 608 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 ZZZ3Q8IYH5 903 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 ZNF680Q8NEM1 530 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 ZBED6CLQ96FA7 236 aaPredicted RBP12.35□□□□□ -0.43
HERC6-202ENST00000273960 RPRD1AQ96P16 312 aaPredicted RBP12.35□□□□□ -0.43
HERC6-202ENST00000273960 ZNF382Q96SR6 550 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 ERVMER34-1Q9H9K5 563 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 REV1Q9UBZ9 1251 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms