RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 MAP4K5Q9Y4K4 846 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 PTPRDP23468 1912 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 GNG14A0A1W2PPG7 69 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 CCDC182A6NF36 153 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 SMAD6O43541 496 aaKnown RBP12.43□□□□□ -0.42
COL8A1-202ENST00000273342 AP2A2O94973 939 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 RPL17P18621 184 aaKnown RBP12.43□□□□□ -0.42
COL8A1-202ENST00000273342 SLC11A2P49281 568 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 LRRC74AQ0VAA2 488 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 NFE2L1Q14494 772 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 FRG2Q64ET8 278 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 TMIGD1Q6UXZ0 262 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 TMCO6Q96DC7 493 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 MED8Q96G25 268 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 FRG2BQ96QU4 278 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 GFM1Q96RP9 751 aaKnown RBP12.43□□□□□ -0.42
COL8A1-202ENST00000273342 FAM129BQ96TA1 746 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 DOHHQ9BU89 302 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 DUSP26Q9BV47 211 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 GPR62Q9BZJ7 368 aa12.43□□□□□ -0.42
COL8A1-202ENST00000273342 PCM1Q15154 2024 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 GLYATL1P3A0A0U1RQE8 302 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 GABRR3A8MPY1 467 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 CENPBD1B2RD01 187 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 SCN2BO60939 215 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 ALX3O95076 343 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 CDRT1O95170 752 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 BPIP17213 487 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 TYMPP19971 482 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 CCR7P32248 378 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 CDH4P55283 916 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 CYP4F8P98187 520 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 IRF8Q02556 426 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 SMU1Q2TAY7 513 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 LDLRAD1Q5T700 205 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 MRPL10Q7Z7H8 261 aaKnown RBP12.42□□□□□ -0.42
COL8A1-202ENST00000273342 NOXA1Q86UR1 476 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 ATCAYQ86WG3 371 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 AQP11Q8NBQ7 271 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 NFKBIDQ8NI38 313 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 TESCQ96BS2 214 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 DIRAS2Q96HU8 199 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 PKP4Q99569 1192 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 GABARAPL3Q9BY60 117 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 C11orf54Q9H0W9 315 aaPredicted RBP12.42□□□□□ -0.42
COL8A1-202ENST00000273342 CLCA3PQ9Y6N3 262 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 XIRP2A4UGR9 3374 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 TBKBP1A7MCY6 615 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 TMEM229AB2RXF0 380 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 PLD2O14939 933 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 ENTPD6O75354 484 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 CYP17A1P05093 508 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 HIST1H2AGP0C0S8 130 aaPredicted RBP12.42□□□□□ -0.42
COL8A1-202ENST00000273342 CCNYL3P0C7X3 344 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 HIST1H2ADP20671 130 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 PRPS1L1P21108 318 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 TIE1P35590 1138 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 ATP5C1P36542 298 aaKnown RBP12.42□□□□□ -0.42
COL8A1-202ENST00000273342 GNG2P59768 71 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 RUNX1T1Q06455 604 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 ACSM2AQ08AH3 577 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 MAP2K5Q13163 448 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 RGNQ15493 299 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 IER5LQ5T953 404 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 ACSM2BQ68CK6 577 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 NCEH1Q6PIU2 408 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 HS6ST3Q8IZP7 471 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 OR9Q1Q8NGQ5 310 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 HIST1H2AHQ96KK5 128 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 FAM193BQ96PV7 902 aaPredicted RBP12.42□□□□□ -0.42
COL8A1-202ENST00000273342 HIST1H2AJQ99878 128 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 H2AFJQ9BTM1 129 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 COQ3Q9NZJ6 369 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 RAB23Q9ULC3 237 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 YARS2Q9Y2Z4 477 aaKnown RBP12.42□□□□□ -0.42
COL8A1-202ENST00000273342 V9GYH0 126 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 GBF1Q92538 1859 aa12.42□□□□□ -0.42
COL8A1-202ENST00000273342 ETHE1O95571 254 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 IGLV3-27P01718 113 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 SRCP12931 536 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 HNF1BP35680 557 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 PRIM2P49643 509 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 VEPH1Q14D04 833 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 PYDC2Q56P42 97 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 XKR6Q5GH73 641 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 GLB1LQ6UWU2 654 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 ELMOD2Q8IZ81 293 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 C1orf52Q8N6N3 182 aaKnown RBP12.41□□□□□ -0.42
COL8A1-202ENST00000273342 OR4A15Q8NGL6 344 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 SUN5Q8TC36 379 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 SNAPC3Q92966 411 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 CMTM7Q96FZ5 175 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 MYO19Q96H55 970 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 EPYCQ99645 322 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 P2RY13Q9BPV8 354 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 ARHGAP39Q9C0H5 1083 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 CRNNQ9UBG3 495 aaPredicted RBP12.41□□□□□ -0.42
COL8A1-202ENST00000273342 PCDHB11Q9Y5F2 797 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 A0A0X1KG70 313 aa12.41□□□□□ -0.42
COL8A1-202ENST00000273342 ICMTO60725 284 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms