RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 ATP6V1HQ9UI12 483 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 LRP4O75096 1905 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 IGKV1-8A0A0C4DH67 115 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 TCRBV3S1A0A5B6 114 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 H3BNX3 289 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 H7BY64 318 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 FKBP9O95302 570 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 TGFB1P01137 390 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 CHRM5P08912 532 aaPredicted RBP14.7□□□□□ -0.06
COPS3-201ENST00000268717 HOXB9P17482 250 aaPredicted RBP14.7□□□□□ -0.06
COPS3-201ENST00000268717 TCN1P20061 433 aaPredicted RBP14.7□□□□□ -0.06
COPS3-201ENST00000268717 CMPK1P30085 196 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 GSK3BP49841 420 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 LIMK1P53667 647 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 PHC1P78364 1004 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 LIPEQ05469 1076 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 PUM1Q14671 1186 aaKnown RBP eCLIP14.7□□□□□ -0.06
COPS3-201ENST00000268717 KIR2DS3Q14952 304 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 RABL3Q5HYI8 236 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 KHDRBS2Q5VWX1 349 aaKnown RBP14.7□□□□□ -0.06
COPS3-201ENST00000268717 LRRC74BQ6ZQY2 392 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 PAGE2Q7Z2X7 111 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 R3HCC1LQ7Z5L2 792 aaKnown RBP14.7□□□□□ -0.06
COPS3-201ENST00000268717 RABEPKQ7Z6M1 372 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 SLC9B2Q86UD5 537 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 ANKRD53Q8N9V6 530 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 FAM156AQ8NDB6 213 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 CCL4L1Q8NHW4 92 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 CEP76Q8TAP6 659 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 DNASE2BQ8WZ79 361 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 COQ8BQ96D53 544 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 PRAP1Q96NZ9 151 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 QRFPRQ96P65 431 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 KCTD14Q9BQ13 255 aaPredicted RBP14.7□□□□□ -0.06
COPS3-201ENST00000268717 CENPKQ9BS16 269 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 PAIP1Q9H074 479 aaKnown RBP14.7□□□□□ -0.06
COPS3-201ENST00000268717 C6orf203Q9P0P8 240 aaPredicted RBP14.7□□□□□ -0.06
COPS3-201ENST00000268717 ADAM29Q9UKF5 820 aa14.7□□□□□ -0.06
COPS3-201ENST00000268717 GNG14A0A1W2PPG7 69 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 SLC30A4O14863 429 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 ANP32DO95626 131 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 TBX6O95947 436 aaPredicted RBP14.69□□□□□ -0.06
COPS3-201ENST00000268717 COX7A2P14406 83 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 PEBP1P30086 187 aaKnown RBP14.69□□□□□ -0.06
COPS3-201ENST00000268717 AHRP35869 848 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 RACK1P63244 317 aaKnown RBP14.69□□□□□ -0.06
COPS3-201ENST00000268717 UBE2IP63279 158 aaKnown RBP14.69□□□□□ -0.06
COPS3-201ENST00000268717 DUOXA1Q1HG43 343 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 RUNDC3AQ59EK9 446 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 ANXA8L1Q5VT79 327 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 TMEM132CQ8N3T6 1108 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 GPR156Q8NFN8 814 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 TNIP2Q8NFZ5 429 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 SNX19Q92543 992 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 RSRC1Q96IZ7 334 aaKnown RBP14.69□□□□□ -0.06
COPS3-201ENST00000268717 SLC6A18Q96N87 628 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 CCDC115Q96NT0 180 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 EDEM2Q9BV94 578 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 PCDHAC1Q9H158 963 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 OR51B5Q9H339 312 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 VAPAQ9P0L0 249 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 TAAR2Q9P1P5 351 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 ANKMY1Q9P2S6 941 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 BTNL2Q9UIR0 455 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 SNX7Q9UNH6 387 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 SNX13Q9Y5W8 968 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 GMEB1Q9Y692 573 aa14.69□□□□□ -0.06
COPS3-201ENST00000268717 A0A1W2PR77 199 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 CASQ2O14958 399 aaPredicted RBP14.68□□□□□ -0.06
COPS3-201ENST00000268717 SCN2BO60939 215 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 DDX5P17844 614 aaKnown RBP14.68□□□□□ -0.06
COPS3-201ENST00000268717 MAOBP27338 520 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 PTPN6P29350 595 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 MSX2P35548 267 aaPredicted RBP14.68□□□□□ -0.06
COPS3-201ENST00000268717 YBX1P67809 324 aaKnown RBP14.68□□□□□ -0.06
COPS3-201ENST00000268717 MRPS22P82650 360 aaKnown RBP14.68□□□□□ -0.06
COPS3-201ENST00000268717 PDE7AQ13946 482 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 TMEM35AQ53FP2 167 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 STPG1Q5TH74 334 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 ZNF425Q6IV72 752 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 SPATA24Q86W54 205 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 PROSER1Q86XN7 944 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 MSRB3Q8IXL7 192 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 ADGRF3Q8IZF5 1079 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 AVL9Q8NBF6 648 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 HIPK4Q8NE63 616 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 VPS37AQ8NEZ2 397 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 ZNF764Q96H86 408 aaPredicted RBP14.68□□□□□ -0.06
COPS3-201ENST00000268717 LRGUKQ96M69 825 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 PPM1MQ96MI6 270 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 BHLHE41Q9C0J9 482 aaPredicted RBP14.68□□□□□ -0.06
COPS3-201ENST00000268717 REXO4Q9GZR2 422 aaKnown RBP14.68□□□□□ -0.06
COPS3-201ENST00000268717 SRMSQ9H3Y6 488 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 REEP4Q9H6H4 257 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 CAAP1Q9H8G2 361 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 CAPN10Q9HC96 672 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 PRM3Q9NNZ6 103 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 AASDHPPTQ9NRN7 309 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 ATAD3AQ9NVI7 634 aa14.68□□□□□ -0.06
COPS3-201ENST00000268717 SUSD2Q9UGT4 822 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms