RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 FNDC1Q4ZHG4 1894 aaPredicted RBP8.46□□□□□ -1.05
VAPB-201ENST00000265619 PRSS47A8MTI9 375 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 CBX4O00257 560 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 CHP2O43745 196 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 PRSS56P0CW18 603 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 HAPLN1P10915 354 aaPredicted RBP8.46□□□□□ -1.06
VAPB-201ENST00000265619 CD1DP15813 335 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 MAP2K3P46734 347 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 KPNA2P52292 529 aaKnown RBP8.46□□□□□ -1.06
VAPB-201ENST00000265619 CCL23P55773 120 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 MRPS6P82932 125 aaKnown RBP8.46□□□□□ -1.06
VAPB-201ENST00000265619 CYP4F8P98187 520 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 RPL6Q02878 288 aaKnown RBP8.46□□□□□ -1.06
VAPB-201ENST00000265619 ELP6Q0PNE2 266 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 ETFDHQ16134 617 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 ZNF782Q6ZMW2 699 aaPredicted RBP8.46□□□□□ -1.06
VAPB-201ENST00000265619 KANSL1Q7Z3B3 1105 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 RNF130Q86XS8 419 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 KRT73Q86Y46 540 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 P3H2Q8IVL5 708 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 DEFB106AQ8N104 65 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 MS4A15Q8N5U1 240 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 OR8K5Q8NH50 307 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 CCDC115Q96NT0 180 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 DMRTA2Q96SC8 542 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 TCF25Q9BQ70 676 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 NT5C1AQ9BXI3 368 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 HHATLQ9HCP6 504 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 STARD7Q9NQZ5 370 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 HPF1Q9NWY4 346 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 TAS2R7Q9NYW3 318 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 CLEC2DQ9UHP7 191 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 STOML2Q9UJZ1 356 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 TLR6Q9Y2C9 796 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 HPGDSO60760 199 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 OR4F21O95013 312 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 RETP07949 1114 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 TSPAN19P0C672 248 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 IDH2P48735 452 aaKnown RBP8.46□□□□□ -1.06
VAPB-201ENST00000265619 SULT1E1P49888 294 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 HSD17B7P56937 341 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 CAMK2GQ13555 558 aaPredicted RBP8.46□□□□□ -1.06
VAPB-201ENST00000265619 XKR7Q5GH72 579 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 CLLU1Q5K131 121 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 OR4F3Q6IEY1 312 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 C19orf48Q6RUI8 117 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 GPR149Q86SP6 731 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 RNF180Q86T96 592 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 KRTCAP2Q8N6L1 136 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 FAM181AQ8N9Y4 354 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.46□□□□□ -1.06
VAPB-201ENST00000265619 PAWRQ96IZ0 340 aaKnown RBP8.46□□□□□ -1.06
VAPB-201ENST00000265619 DEFB118Q96PH6 123 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 TMEM209Q96SK2 561 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 SECISBP2Q96T21 854 aaKnown RBP8.46□□□□□ -1.06
VAPB-201ENST00000265619 RLIMQ9NVW2 624 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 GALPQ9UBC7 116 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 PADI3Q9ULW8 664 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 PRELID3BQ9Y3B1 194 aa8.46□□□□□ -1.06
VAPB-201ENST00000265619 POLR3HQ9Y535 204 aaPredicted RBP8.46□□□□□ -1.06
VAPB-201ENST00000265619 A0A0G2JMZ2 1700 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 SMIM35A0A1B0GVV1 85 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 RFXAPO00287 272 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 PER2O15055 1255 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 RGS11O94810 467 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 CYBAP13498 195 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 HTR7P34969 479 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 ZNF81P51508 661 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 ARSDP51689 593 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 TKTL1P51854 596 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 PWP1Q13610 501 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 KIAA0040Q15053 153 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 PAFAH1B3Q15102 231 aaKnown RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 RFX4Q33E94 735 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 FBXO47Q5MNV8 452 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 WSCD1Q658N2 575 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 ZNF549Q6P9A3 640 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 SLC34A3Q8N130 599 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 ZNF655Q8N720 491 aaPredicted RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 B3GNT7Q8NFL0 401 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 BLOC1S5Q8TDH9 187 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 ZNF296Q8WUU4 475 aaPredicted RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 KLHL6Q8WZ60 621 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 TRMOQ9BU70 441 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 MRM3Q9HC36 420 aaKnown RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 PAK6Q9NQU5 681 aaPredicted RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 TREX1Q9NSU2 369 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 PIGVQ9NUD9 493 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 COA4Q9NYJ1 87 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 SPASTQ9UBP0 616 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 YARS2Q9Y2Z4 477 aaKnown RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 KCTD3Q9Y597 815 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 TRBV23-1A0A0A0MS06 115 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 A0A1W2PRQ8 180 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 E9PQ18 207 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 ADAM11O75078 769 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 ABRQ12979 859 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 PRKG2Q13237 762 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 ZNF284Q2VY69 593 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 DCAF4L1Q3SXM0 396 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms