RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 IMPG1Q17R60 797 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 C18orf21Q32NC0 220 aaPredicted RBP11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 FBXO48Q5FWF7 155 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 TOR1AIP1Q5JTV8 583 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 ATG16L1Q676U5 607 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 OVCH1Q7RTY7 1134 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 SPACA3Q8IXA5 215 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 LAS2Q8IYD9 372 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 GBP7Q8N8V2 638 aaPredicted RBP11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 L3MBTL4Q8NA19 623 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 SELENOMQ8WWX9 145 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 THAP4Q8WY91 577 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 GAL3ST3Q96A11 431 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 TM4SF19Q96DZ7 209 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 CCT7Q99832 543 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 TBCDQ9BTW9 1192 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 NPLQ9BXD5 320 aaPredicted RBP11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 SLC29A3Q9BZD2 475 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 CHST8Q9H2A9 424 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 WDR54Q9H977 334 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 WDR41Q9HAD4 459 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 MID1IP1Q9NPA3 183 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 MED4Q9NPJ6 270 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 MS4A12Q9NXJ0 267 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 TRPS1Q9UHF7 1281 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 CROTQ9UKG9 612 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 PCTPQ9UKL6 214 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 TSC22D4Q9Y3Q8 395 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 MAP4K5Q9Y4K4 846 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 PCDHGA6Q9Y5G7 932 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 LAMA5O15230 3695 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 FREM2Q5SZK8 3169 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 A0A1W2PNU3 283 aaPredicted RBP11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 SRRM3A6NNA2 597 aaPredicted RBP11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 FOXE1O00358 373 aaPredicted RBP11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 DYRK3O43781 588 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 LCMT2O60294 686 aaKnown RBP11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 CREG1O75629 220 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 ATXN8OSP0DMR3 200 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 SFTPCP11686 197 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 HSD3B1P14060 373 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 ZNF28P17035 718 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 DDX5P17844 614 aaKnown RBP11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 HSD3B2P26439 372 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 SLC18A1P54219 525 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 MTTPP55157 894 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 CXADRP78310 365 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 CYP4F2P78329 520 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 BIKQ13323 160 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 DSG2Q14126 1118 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 ZRSR2Q15696 482 aaKnown RBP11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 HKDC1Q2TB90 917 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 PRTGQ2VWP7 1150 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 GGTA1PQ4G0N0 100 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 CRTC2Q53ET0 693 aaPredicted RBP11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 FRG2Q64ET8 278 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 TMEM214Q6NUQ4 689 aaKnown RBP11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 CYP20A1Q6UW02 462 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 EXOC3L1Q86VI1 746 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 ARFGAP2Q8N6H7 521 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 OR2L5Q8NG80 312 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 OR7G3Q8NG95 312 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 ZCCHC10Q8TBK6 192 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 ZNF483Q8TF39 744 aaPredicted RBP11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 SLC45A3Q96JT2 553 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 FER1L6-AS2Q96M78 137 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 FRG2BQ96QU4 278 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 ZNF382Q96SR6 550 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 TMBIM4Q9HC24 238 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 SEMA3GQ9NS98 782 aa11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 PTRH2Q9Y3E5 179 aaKnown RBP11.94□□□□□ -0.5
CLNS1A-201ENST00000263309 UNC13CQ8NB66 2214 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 NBEAQ8NFP9 2946 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 A0A0A6YYC8 382 aaPredicted RBP11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 LRIT2A6NDA9 550 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 I3L1I5 382 aaPredicted RBP11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 ERI3O43414 337 aaKnown RBP11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 TLX3O43711 291 aaPredicted RBP11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 NPHS1O60500 1241 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 ESRRBO95718 433 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 HSPA4LO95757 839 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 TGFB1P01137 390 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 CYC1P08574 325 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 RPS17P08708 135 aaKnown RBP11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 UROSP10746 265 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 ICAM2P13598 275 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 RORAP35398 523 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 OR1D4P47884 311 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 CDH13P55290 713 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 MAGOHP61326 146 aaKnown RBP11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 YBX1P67809 324 aaKnown RBP11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 BTN3A2P78410 334 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 GALNT1Q10472 559 aaPredicted RBP11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 CUL3Q13618 768 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 SLC9A5Q14940 896 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 NCF4Q15080 339 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 GPR155Q7Z3F1 870 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 ENDOVQ8N8Q3 282 aaKnown RBP11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 OR4F6Q8NGB9 312 aa11.93□□□□□ -0.5
CLNS1A-201ENST00000263309 CT55Q8WUE5 264 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms