RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CAPZBP47756 277 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 ARFIP1P53367 373 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 BIRC2Q13490 618 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 PWP1Q13610 501 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 KPNB1Q14974 876 aaKnown RBP21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 PGS1Q32NB8 556 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 PRR23BQ6ZRT6 265 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 KANSL1Q7Z3B3 1105 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 ARL10Q8N8L6 244 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 OR7A2PQ8NGA2 310 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 OR8J2Q8NGG1 315 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 MS4A6EQ96DS6 147 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 THAP11Q96EK4 314 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 QRFPRQ96P65 431 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 FCRL4Q96PJ5 515 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 OR2A5Q96R48 311 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 ABCG4Q9H172 646 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 KLHL31Q9H511 634 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 ADA2Q9NZK5 511 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 MAN2B2Q9Y2E5 1009 aa21.84■■□□□ 1.09
SMARCB1-201ENST00000263121 ZDBF2Q9HCK1 2354 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 A0A1B0GTQ1 180 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 STATHP02808 62 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 PROS1P07225 676 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 COX7A2P14406 83 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 HPCAL1P37235 193 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 KIR3DL1P43629 444 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 SLC7A2P52569 658 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 CCNYL2Q5T2Q4 361 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 FAM71E1Q6IPT2 247 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 IKBIPQ70UQ0 350 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 NUDT13Q86X67 352 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 NT5CQ8TCD5 201 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 TM4SF19Q96DZ7 209 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 MACROD1Q9BQ69 325 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 SLC6A16Q9GZN6 736 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 DDX31Q9H8H2 851 aaKnown RBP21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 SERHLQ9NQF3 203 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 ATP6V1HQ9UI12 483 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 POMPQ9Y244 141 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 NEUROG3Q9Y4Z2 214 aa21.83■■□□□ 1.09
SMARCB1-201ENST00000263121 MDC1Q14676 2089 aaKnown RBP21.83■■□□□ 1.08
SMARCB1-201ENST00000263121 BDP1A6H8Y1 2624 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 AVPR2P30518 371 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 EPHA4P54764 986 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 WNT3P56703 355 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 TAS2R50P59544 299 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 OR4C11Q6IEV9 310 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 OR4F3Q6IEY1 312 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 RNF44Q7L0R7 432 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 ASPGQ86U10 573 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 GPR180Q86V85 440 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 SLC15A3Q8IY34 581 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 KIAA2013Q8IYS2 634 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 CCDC124Q96CT7 223 aaKnown RBP21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 KLHL25Q9H0H3 589 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 SEMA6CQ9H3T2 930 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 REEP4Q9H6H4 257 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 CD300AQ9UGN4 299 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 BTBD3Q9Y2F9 522 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 PCDHA9Q9Y5H5 950 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 RNF215Q9Y6U7 377 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 CACNA1EQ15878 2313 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 GABRR3A8MPY1 467 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 C4orf51C9J302 202 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 TRIM38O00635 465 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 NME4O00746 187 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 KCNH1O95259 989 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 PIM1P11309 404 aaPredicted RBP21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 ME2P23368 584 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 PDE7AQ13946 482 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 DUOXA1Q1HG43 343 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 TOR1AIP1Q5JTV8 583 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 SAMD4BQ5PRF9 694 aaKnown RBP21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 C6orf163Q5TEZ5 329 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 C1orf146Q5VVC0 180 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 SLC35F3Q8IY50 421 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 TMEM132CQ8N3T6 1108 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 OR2L5Q8NG80 312 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 TMEM125Q96AQ2 219 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 COQ8BQ96D53 544 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 TEFMQ96QE5 360 aaKnown RBP21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 ZFYVE21Q9BQ24 234 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 KCNH6Q9H252 994 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 RMND5AQ9H871 391 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 CMTM6Q9NX76 183 aa21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 WBP11Q9Y2W2 641 aaKnown RBP21.82■■□□□ 1.08
SMARCB1-201ENST00000263121 NCOR1O75376 2440 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 PRORSD1PA6NEY8 169 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 RHPN2P1A8MT19 583 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 NUDT21O43809 227 aaKnown RBP21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 PRAMEF10O60809 474 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 SCN2BO60939 215 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 ENTPD5O75356 428 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 GSTM5P46439 218 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 HNRNPFP52597 415 aaKnown RBP21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 MAPK12P53778 367 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 PLA2G16P53816 162 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 ACTR3P61158 418 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 HLA-BQ31612 363 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms