RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 SPARCP09486 303 aa13.85□□□□□ -0.19
CUX2-201ENST00000261726 GHRHRQ02643 423 aa13.85□□□□□ -0.19
CUX2-201ENST00000261726 GATSQ8NAP1 163 aa13.85□□□□□ -0.19
CUX2-201ENST00000261726 C2orf15Q8WU43 125 aaKnown RBP13.85□□□□□ -0.19
CUX2-201ENST00000261726 ZNF641Q96N77 438 aaPredicted RBP13.85□□□□□ -0.19
CUX2-201ENST00000261726 MKLN1Q9UL63 735 aa13.85□□□□□ -0.19
CUX2-201ENST00000261726 TULP2O00295 520 aa13.85□□□□□ -0.19
CUX2-201ENST00000261726 SELENOVP59797 346 aa13.85□□□□□ -0.19
CUX2-201ENST00000261726 ST3GAL3Q11203 375 aa13.85□□□□□ -0.19
CUX2-201ENST00000261726 RFTN1Q14699 578 aaPredicted RBP13.85□□□□□ -0.19
CUX2-201ENST00000261726 OR2T5Q6IEZ7 315 aa13.85□□□□□ -0.19
CUX2-201ENST00000261726 OR2T29Q8NH02 315 aa13.85□□□□□ -0.19
CUX2-201ENST00000261726 CANT1Q8WVQ1 401 aa13.85□□□□□ -0.19
CUX2-201ENST00000261726 TSSK6Q9BXA6 273 aa13.85□□□□□ -0.19
CUX2-201ENST00000261726 IGSF9Q9P2J2 1179 aa13.85□□□□□ -0.19
CUX2-201ENST00000261726 PADI2Q9Y2J8 665 aa13.85□□□□□ -0.19
CUX2-201ENST00000261726 GLOD5A6NK44 160 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 ARL6IP5O75915 188 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 LYPLA2O95372 231 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 AHSA1O95433 338 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 SNU13P55769 128 aaKnown RBP13.84□□□□□ -0.19
CUX2-201ENST00000261726 FKBP1BP68106 108 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 CDK6Q00534 326 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 TMCO2Q7Z6W1 182 aaPredicted RBP13.84□□□□□ -0.19
CUX2-201ENST00000261726 FANK1Q8TC84 345 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 EIF2B3Q9NR50 452 aaKnown RBP13.84□□□□□ -0.19
CUX2-201ENST00000261726 TAS2R10Q9NYW0 307 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 COL14A1Q05707 1796 aaKnown RBP13.84□□□□□ -0.19
CUX2-201ENST00000261726 CLDN7O95471 211 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 RPS13P62277 151 aaKnown RBP13.84□□□□□ -0.19
CUX2-201ENST00000261726 SLC18A2Q05940 514 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 MSLNLQ96KJ4 702 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 EFCAB11Q9BUY7 163 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 NIFKQ9BYG3 293 aaKnown RBP13.84□□□□□ -0.19
CUX2-201ENST00000261726 SALL3Q9BXA9 1300 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 PPP1R11O60927 126 aaPredicted RBP13.84□□□□□ -0.19
CUX2-201ENST00000261726 FHP07954 510 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 MAB21L1Q13394 359 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 LAPTM4AQ15012 233 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 GOLGA7Q7Z5G4 137 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 SLC6A7Q99884 636 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 EOMESO95936 686 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 LCN1P31025 176 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 MAGEA8P43361 318 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 SOX2P48431 317 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 TREML1Q86YW5 311 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 VGLL2Q8N8G2 317 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 OR6N2Q8NGY6 317 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 C15orf40Q8WUR7 153 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 C16orf58Q96GQ5 468 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 FN3KQ9H479 309 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 ITM2CQ9NQX7 267 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 B8ZZF3 427 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 ZNF35P13682 527 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 CAV3P56539 151 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 JAM2P57087 298 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 UFM1P61960 85 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 RHDQ02161 417 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 CHRFAM7AQ494W8 412 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 TMEM80Q96HE8 168 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 ALPK1Q96QP1 1244 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 APOBEC3GQ9HC16 384 aaKnown RBP13.84□□□□□ -0.19
CUX2-201ENST00000261726 NANSQ9NR45 359 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 DNM1LO00429 736 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 C6orf47O95873 294 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 FESP07332 822 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 CREB1P16220 341 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 SYN1P17600 705 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 CFL1P23528 166 aaKnown RBP13.84□□□□□ -0.19
CUX2-201ENST00000261726 GDF5P43026 501 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 FAM86B1Q8N7N1 296 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 DBF4BQ8NFT6 615 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 ENAMQ9NRM1 1142 aa13.84□□□□□ -0.19
CUX2-201ENST00000261726 LOC730098B7Z3J9 87 aa13.83□□□□□ -0.19
CUX2-201ENST00000261726 SYNGR4O95473 234 aa13.83□□□□□ -0.19
CUX2-201ENST00000261726 PDYNP01213 254 aa13.83□□□□□ -0.19
CUX2-201ENST00000261726 CHRM1P11229 460 aaPredicted RBP13.83□□□□□ -0.19
CUX2-201ENST00000261726 NR2C1P13056 603 aa13.83□□□□□ -0.19
CUX2-201ENST00000261726 PTGIRP43119 386 aa13.83□□□□□ -0.19
CUX2-201ENST00000261726 ASPAP45381 313 aa13.83□□□□□ -0.19
CUX2-201ENST00000261726 RBM39Q14498 530 aaKnown RBP13.83□□□□□ -0.19
CUX2-201ENST00000261726 TIGD5Q53EQ6 642 aa13.83□□□□□ -0.19
CUX2-201ENST00000261726 C6orf183Q5T699 404 aa13.83□□□□□ -0.19
CUX2-201ENST00000261726 HSH2DQ96JZ2 352 aa13.83□□□□□ -0.19
CUX2-201ENST00000261726 CGREF1Q99674 301 aa13.83□□□□□ -0.19
CUX2-201ENST00000261726 CCSER2Q9H7U1 834 aa13.83□□□□□ -0.19
CUX2-201ENST00000261726 SSU72Q9NP77 194 aaKnown RBP13.83□□□□□ -0.19
CUX2-201ENST00000261726 CDC123O75794 336 aaPredicted RBP13.83□□□□□ -0.2
CUX2-201ENST00000261726 POP7O75817 140 aaKnown RBP13.83□□□□□ -0.2
CUX2-201ENST00000261726 PLATP00750 562 aa13.83□□□□□ -0.2
CUX2-201ENST00000261726 EDNRBP24530 442 aa13.83□□□□□ -0.2
CUX2-201ENST00000261726 SLC15A1P46059 708 aa13.83□□□□□ -0.2
CUX2-201ENST00000261726 EEFSECP57772 596 aaKnown RBP13.83□□□□□ -0.2
CUX2-201ENST00000261726 FAM189A2Q15884 450 aa13.83□□□□□ -0.2
CUX2-201ENST00000261726 SUSD1Q6UWL2 747 aa13.83□□□□□ -0.2
CUX2-201ENST00000261726 TTLL10Q6ZVT0 673 aa13.83□□□□□ -0.2
CUX2-201ENST00000261726 GKN2Q86XP6 184 aa13.83□□□□□ -0.2
CUX2-201ENST00000261726 DTX3Q8N9I9 347 aa13.83□□□□□ -0.2
CUX2-201ENST00000261726 HSPA12BQ96MM6 686 aa13.83□□□□□ -0.2
CUX2-201ENST00000261726 OR51B5Q9H339 312 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms