RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 M0R3G1 203 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 PSMD11O00231 422 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 SAP18O00422 153 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 SOCS2O14508 198 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 HNRNPRO43390 633 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 CBX7O95931 251 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 C8BP07358 591 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 RNF224P0DH78 156 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 HTR2AP28223 471 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 TGFBR1P36897 503 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 FASLGP48023 281 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 SLC11A2P49281 568 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 NAA20P61599 178 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 MYBPC1Q00872 1141 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 VPS26BQ4G0F5 336 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 PLXDC2Q6UX71 529 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 FRA10AC1Q70Z53 315 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 RNF44Q7L0R7 432 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 CPLX4Q7Z7G2 160 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 HMGN2P46Q86SG4 172 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 PDZD3Q86UT5 571 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 PTGR2Q8N8N7 351 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 OR2T3Q8NH03 318 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 ERP27Q96DN0 273 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 C1orf21Q9H246 121 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 OCEL1Q9H607 264 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 ASB8Q9H765 288 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 LYARQ9NX58 379 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 WNT16Q9UBV4 365 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 TSR3Q9UJK0 312 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 WIPF3A6NGB9 483 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 MTSS1O43312 755 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 NADKO95544 446 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 PGRP06401 933 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 EPHX1P07099 455 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 PRG2P13727 222 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 CD151P48509 253 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 CDK9P50750 372 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 ZNF177Q13360 481 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 SQSTM1Q13501 440 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 KRT72Q14CN4 511 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 EIF4HQ15056 248 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 SPANXN4Q5MJ08 99 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 TMEM214Q6NUQ4 689 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 FLCNQ8NFG4 579 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 ADAMTS14Q8WXS8 1223 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 POP5Q969H6 163 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 ZBTB18Q99592 522 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 MRPL46Q9H2W6 279 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 SACSQ9NZJ4 4579 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 NCF1BA6NI72 391 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 NCF1CA8MVU1 366 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 NCF1P14598 390 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 ALDH18A1P54886 795 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 ACTR3P61158 418 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 GABPB1Q06547 395 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 TBCCQ15814 346 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 RSPO1Q2MKA7 263 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 ARMC10Q8N2F6 343 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 RFLNBQ8N5W9 214 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 ANKRD42Q8N9B4 389 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 NETO1Q8TDF5 533 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 ZNF501Q96CX3 271 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 VPS50Q96JG6 964 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 TRMT61BQ9BVS5 477 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 STN1Q9H668 368 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 PIDD1Q9HB75 910 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 SEMA4BQ9NPR2 832 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 FAF1Q9UNN5 650 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 GPR34Q9UPC5 381 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 VPS13BQ7Z7G8 4022 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 IGKV1D-42A0A075B6H8 117 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 J3KTA2 159 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 WBP4O75554 376 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 FGF19O95750 216 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 ESR1P03372 595 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 MTHFD1P11586 935 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 NME1P15531 152 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 MX2P20592 715 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 EMDP50402 254 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 NANOGP8Q6NSW7 305 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 RTN4RL2Q86UN3 420 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 LYPD6Q86Y78 171 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 KIF18BQ86Y91 864 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 TWIST2Q8WVJ9 160 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 PKP2Q99959 881 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 KDM4CQ9H3R0 1056 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 SLC32A1Q9H598 525 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 KIR3DX1Q9H7L2 352 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 NANOGQ9H9S0 305 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 KCNK4Q9NYG8 393 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 FZD4Q9ULV1 537 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 TRAF6Q9Y4K3 522 aa5.32□□□□□ -1.56
TOPBP1-201ENST00000260810 C9orf172C9J069 976 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 HNRNPCL1O60812 293 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 LDB3O75112 727 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 PDE5AO76074 875 aa5.31□□□□□ -1.56
TOPBP1-201ENST00000260810 ZNF682O95780 498 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms