RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 RUVBL1Q9Y265 456 aaKnown RBP16.7■□□□□ 0.26
SRSF1-201ENST00000258962 DYTNA2CJ06 578 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 PCSK2P16519 638 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 ACSM2AQ08AH3 577 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 BIRC2Q13490 618 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 C1orf146Q5VVC0 180 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 ACSM2BQ68CK6 577 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 OGFOD3Q6PK18 319 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 SLC2A7Q6PXP3 512 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 AMIGO1Q86WK6 493 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 TMPRSS12Q86WS5 348 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 FAM20CQ8IXL6 584 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 GLB1L3Q8NCI6 653 aaPredicted RBP16.7■□□□□ 0.26
SRSF1-201ENST00000258962 OR4E2Q8NGC2 313 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 ZDHHC1Q8WTX9 485 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 LCN9Q8WX39 176 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 STMN2Q93045 179 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 CCDC124Q96CT7 223 aaKnown RBP16.7■□□□□ 0.26
SRSF1-201ENST00000258962 EGLN2Q96KS0 407 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 TMEM74Q96NL1 305 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 ZBTB18Q99592 522 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 RHBGQ9H310 441 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 NT5DC2Q9H857 520 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 IL1RL2Q9HB29 575 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 OR6C2Q9NZP2 312 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 PPT2Q9UMR5 302 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 WASF3Q9UPY6 502 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 POMPQ9Y244 141 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 NEUROG3Q9Y4Z2 214 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 FEZF1A0PJY2 475 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 TBX6O95947 436 aaPredicted RBP16.69■□□□□ 0.26
SRSF1-201ENST00000258962 TGFB1P01137 390 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 CHRM5P08912 532 aaPredicted RBP16.69■□□□□ 0.26
SRSF1-201ENST00000258962 UBE2IP63279 158 aaKnown RBP16.69■□□□□ 0.26
SRSF1-201ENST00000258962 CAPRIN1Q14444 709 aaKnown RBP16.69■□□□□ 0.26
SRSF1-201ENST00000258962 RBBP5Q15291 538 aaKnown RBP16.69■□□□□ 0.26
SRSF1-201ENST00000258962 FAM174BQ3ZCQ3 159 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 SPIN4Q56A73 249 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 SPANXN4Q5MJ08 99 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 TMPRSS7Q7RTY8 843 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 RIMKLAQ8IXN7 391 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 ADGRF3Q8IZF5 1079 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 GPR156Q8NFN8 814 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 OR2L3Q8NG85 312 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 LRRC58Q96CX6 371 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 OR51B5Q9H339 312 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 DCLRE1BQ9H816 532 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 SPAG4Q9NPE6 437 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 TMEM181Q9P2C4 612 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 KLK13Q9UKR3 277 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 CROCCQ5TZA2 2017 aa16.69■□□□□ 0.26
SRSF1-201ENST00000258962 BTN3A3O00478 584 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 XRCC1P18887 633 aaPredicted RBP16.68■□□□□ 0.26
SRSF1-201ENST00000258962 CXCR2P25025 360 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 ACTR3P61158 418 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 PHEXP78562 749 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 NFYCQ13952 458 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 GPR18Q14330 331 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 C14orf28Q4W4Y0 310 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 FAM9CQ8IZT9 166 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 NAGSQ8N159 534 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 DPP10Q8N608 796 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 RNF148Q8N7C7 305 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 FLVCR1-AS1Q8TAF5 88 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 PITHD1Q9GZP4 211 aaPredicted RBP16.68■□□□□ 0.26
SRSF1-201ENST00000258962 MRPS30Q9NP92 439 aaKnown RBP16.68■□□□□ 0.26
SRSF1-201ENST00000258962 GID8Q9NWU2 228 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 SIRT5Q9NXA8 310 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 SLAMF8Q9P0V8 285 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 MSRB2Q9Y3D2 182 aa16.68■□□□□ 0.26
SRSF1-201ENST00000258962 MDC1Q14676 2089 aaKnown RBP16.68■□□□□ 0.26
SRSF1-201ENST00000258962 ASXL3Q9C0F0 2248 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 LCMT2O60294 686 aaKnown RBP16.67■□□□□ 0.26
SRSF1-201ENST00000258962 NOBOXO60393 691 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 TIA1P31483 386 aaKnown RBP eCLIP16.67■□□□□ 0.262e-7■■■■■ 29.6
SRSF1-201ENST00000258962 SLC7A2P52569 658 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 CLNS1AP54105 237 aaKnown RBP16.67■□□□□ 0.26
SRSF1-201ENST00000258962 CYP4F2P78329 520 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 ABATP80404 500 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 FOXM1Q08050 763 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 HES3Q5TGS1 186 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 GALNT18Q6P9A2 607 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 TRIM48Q8IWZ4 208 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 METTL4Q8N3J2 472 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 SLC37A2Q8TED4 501 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 ZFPM2Q8WW38 1151 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 SLC13A3Q8WWT9 602 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 HOPXQ9BPY8 73 aaPredicted RBP16.67■□□□□ 0.26
SRSF1-201ENST00000258962 MS4A8Q9BY19 250 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 SRMSQ9H3Y6 488 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 PRM3Q9NNZ6 103 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 POT1Q9NUX5 634 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 NMRK1Q9NWW6 199 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 ADA2Q9NZK5 511 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 ABCD2Q9UBJ2 740 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 CPNE7Q9UBL6 633 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 ADGRE2Q9UHX3 823 aa16.67■□□□□ 0.26
SRSF1-201ENST00000258962 KIR2DS5A0A0G2JLQ3 304 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 A0A0G2JNG1 304 aa16.66■□□□□ 0.26
SRSF1-201ENST00000258962 TRBC2A0A5B9 178 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms