RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 SPHK1Q9NYA1 384 aa8.34□□□□□ -1.07
CALCOCO2-201ENST00000258947 SLC25A37Q9NYZ2 338 aa8.34□□□□□ -1.07
CALCOCO2-201ENST00000258947 KIF17Q9P2E2 1029 aa8.34□□□□□ -1.07
CALCOCO2-201ENST00000258947 SLC17A4Q9Y2C5 497 aa8.34□□□□□ -1.07
CALCOCO2-201ENST00000258947 BTBD3Q9Y2F9 522 aa8.34□□□□□ -1.07
CALCOCO2-201ENST00000258947 PCDHB3Q9Y5E6 796 aa8.34□□□□□ -1.07
CALCOCO2-201ENST00000258947 hCG_2039718K7EN88 272 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 CREG1O75629 220 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 SMNDC1O75940 238 aaKnown RBP eCLIP8.33□□□□□ -1.085e-14■■■■■ 48.1
CALCOCO2-201ENST00000258947 DIRAS1O95057 198 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 C8orf89P0DMQ9 161 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 IL9P15248 144 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 DDX5P17844 614 aaKnown RBP8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 MAGP20916 626 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 NDUFS1P28331 727 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 SHMT2P34897 504 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 TNFAIP8L2Q6P589 184 aaPredicted RBP8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 ERMP1Q7Z2K6 904 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 MMP21Q8N119 569 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 OXR1Q8N573 874 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 LINC01555Q8NAE3 123 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 OR8K5Q8NH50 307 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 CENPNQ96H22 339 aaPredicted RBP8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 ZNF583Q96ND8 569 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 GSDMCQ9BYG8 508 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 GIMAP4Q9NUV9 329 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 RIMS3Q9UJD0 308 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 TCRBV3S1A0A5B6 114 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 PRAMEF26H0Y7S4 382 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 EI24O14681 340 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 SDC3O75056 442 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 ALBP02768 609 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 C8BP07358 591 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 JUNDP17535 347 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 HSPA13P48723 471 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 TGM3Q08188 693 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 ABHD18Q0P651 414 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 RUNDC3AQ59EK9 446 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 PRR23BQ6ZRT6 265 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 RERGQ96A58 199 aaPredicted RBP8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 TESCQ96BS2 214 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 FAIM2Q9BWQ8 316 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 SYNDIG1Q9H7V2 258 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 HRASLS2Q9NWW9 162 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 APOBEC3BQ9UH17 382 aaKnown RBP8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 ENTPD4Q9Y227 616 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 AP3M1Q9Y2T2 418 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 KIF26AQ9ULI4 1882 aaPredicted RBP8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 TDRD6O60522 2096 aaKnown RBP8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 ZNF860A6NHJ4 632 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 CAPN5O15484 640 aaPredicted RBP8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 PRMT3O60678 531 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 SCELO95171 688 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 CCNDBP1O95273 360 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 SLC35G6P0C7Q6 338 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 CD6P30203 668 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 PIK3CBP42338 1070 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 TRPC1P48995 793 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 RPS26P62854 115 aaKnown RBP8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 RGS1Q08116 209 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 SLC9A5Q14940 896 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 TOR1AIP1Q5JTV8 583 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 TPRG1LQ5T0D9 272 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 DEPDC1Q5TB30 811 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 LPCAT2Q7L5N7 544 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 ZNF786Q8N393 782 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 BMFQ96LC9 184 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 TCEAL2Q9H3H9 227 aaPredicted RBP8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 EQTNQ9NQ60 294 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 RAB23Q9ULC3 237 aa8.33□□□□□ -1.08
CALCOCO2-201ENST00000258947 SPAG17Q6Q759 2223 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 NUP210Q8TEM1 1887 aaPredicted RBP8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 PPM1DO15297 605 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 PDPK1O15530 556 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 HS6ST1O60243 411 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 LCMT2O60294 686 aaKnown RBP8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 EML2O95834 649 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 RAP2AP10114 183 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 UMPSP11172 480 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 F3P13726 295 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 YAP1P46937 504 aaKnown RBP8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 RABIFP47224 123 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 ZFP36L2P47974 494 aaKnown RBP8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 BLKP51451 505 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 BTN3A2P78410 334 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 PRKCQQ04759 706 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 ALG11Q2TAA5 492 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 OGFRL1Q5TC84 451 aaPredicted RBP8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 ZNF551Q7Z340 670 aaPredicted RBP8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 SLC9B2Q86UD5 537 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 ADGRG5Q8IZF4 528 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 DNAJB8Q8NHS0 232 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 NETO1Q8TDF5 533 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 LMX1AQ8TE12 382 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 CHTF18Q8WVB6 975 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 OTUB1Q96FW1 271 aaPredicted RBP8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 SLC6A18Q96N87 628 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 SLC29A1Q99808 456 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 EHD1Q9H4M9 534 aa8.32□□□□□ -1.08
CALCOCO2-201ENST00000258947 ADPRHL2Q9NX46 363 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms