RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 SLC34A3Q8N130 599 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 WDR48Q8TAF3 677 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 DMRTB1Q96MA1 342 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 AKIP1Q9NQ31 210 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 PCDHGB3Q9Y5G1 929 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 PCDHGA6Q9Y5G7 932 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 LEFTY2O00292 366 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 AQP9O43315 295 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 TGM4P49221 684 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 GZMMP51124 257 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 UBE3AQ05086 875 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 HSPB3Q12988 150 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 SCARB2Q14108 478 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 GRIN2CQ14957 1233 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 DEPDC1Q5TB30 811 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 RSBN1Q5VWQ0 802 aaPredicted RBP12.99□□□□□ -0.33
VHL-201ENST00000256474 TSPYL5Q86VY4 417 aaPredicted RBP12.99□□□□□ -0.33
VHL-201ENST00000256474 AQP11Q8NBQ7 271 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 PPP1R14BQ96C90 147 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 PPCDCQ96CD2 204 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 AP2M1Q96CW1 435 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 ZNF558Q96NG5 402 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 OR5M11Q96RB7 305 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 CCM2Q9BSQ5 444 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 DUSP21Q9H596 190 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 SIAEQ9HAT2 523 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 WNT6Q9Y6F9 365 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 KCNE2Q9Y6J6 123 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 KIAA0100Q14667 2235 aaKnown RBP12.99□□□□□ -0.33
VHL-201ENST00000256474 MYO10Q9HD67 2058 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 CTDSP2O14595 271 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 TNNI3P19429 210 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 WNT3P56703 355 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 ELP6Q0PNE2 266 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 ASTLQ6HA08 431 aaPredicted RBP12.99□□□□□ -0.33
VHL-201ENST00000256474 CBLL1Q75N03 491 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 DYNC2LI1Q8TCX1 351 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 OR2AG1Q9H205 316 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 DNMT3AQ9Y6K1 912 aaPredicted RBP12.99□□□□□ -0.33
VHL-201ENST00000256474 RFXAPO00287 272 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 ZNF821O75541 412 aaPredicted RBP12.98□□□□□ -0.33
VHL-201ENST00000256474 RFPL2O75678 378 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 ACRP10323 421 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 CNTN1Q12860 1018 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 GDPD4Q6W3E5 623 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 FAM9CQ8IZT9 166 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 AMER2Q8N7J2 671 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 GGHQ92820 318 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 SLC38A4Q969I6 547 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 TCEAL4Q96EI5 215 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 ZNF300Q96RE9 604 aaPredicted RBP12.98□□□□□ -0.33
VHL-201ENST00000256474 YIPF4Q9BSR8 244 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 MROQ9BYG7 248 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 STOX2Q9P2F5 926 aaPredicted RBP12.98□□□□□ -0.33
VHL-201ENST00000256474 SRRDQ9UH36 339 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 TRIOO75962 3097 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 WWP2O00308 870 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 SSX4O60224 188 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 GSTT2P0CG29 244 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 GSTT2BP0CG30 244 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 SPNP16150 400 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 STEAP3Q658P3 488 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 SERPINA11Q86U17 422 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 OR4K3Q96R72 315 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 FAM129BQ96TA1 746 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 TRPC4Q9UBN4 977 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 SCAMP2O15127 329 aaKnown RBP12.98□□□□□ -0.33
VHL-201ENST00000256474 OR10H3O60404 316 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 POP4O95707 220 aaKnown RBP12.98□□□□□ -0.33
VHL-201ENST00000256474 ELFN1P0C7U0 828 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 ITGAMP11215 1152 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 NNMTP40261 264 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 TMEM53Q6P2H8 277 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 ARMC8Q8IUR7 673 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 TCAIMQ8N3R3 496 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 MYDGFQ969H8 173 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 DOHHQ9BU89 302 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 RDH14Q9HBH5 336 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 CCNB1IP1Q9NPC3 277 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 MOSPD1Q9UJG1 213 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 NDRG4Q9ULP0 352 aaKnown RBP12.98□□□□□ -0.33
VHL-201ENST00000256474 SH2B3Q9UQQ2 575 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 AP3M1Q9Y2T2 418 aa12.98□□□□□ -0.33
VHL-201ENST00000256474 GPC6Q9Y625 555 aaPredicted RBP12.98□□□□□ -0.33
VHL-201ENST00000256474 TRAV19A0A0A6YYK7 116 aa12.97□□□□□ -0.33
VHL-201ENST00000256474 SOCS5O75159 536 aa12.97□□□□□ -0.33
VHL-201ENST00000256474 NME6O75414 186 aaPredicted RBP12.97□□□□□ -0.33
VHL-201ENST00000256474 GADD45GO95257 159 aa12.97□□□□□ -0.33
VHL-201ENST00000256474 C8AP07357 584 aa12.97□□□□□ -0.33
VHL-201ENST00000256474 CD9P21926 228 aa12.97□□□□□ -0.33
VHL-201ENST00000256474 GRK3P35626 688 aa12.97□□□□□ -0.33
VHL-201ENST00000256474 SOX3P41225 446 aa12.97□□□□□ -0.33
VHL-201ENST00000256474 MAPK8P45983 427 aa12.97□□□□□ -0.33
VHL-201ENST00000256474 METAP1P53582 386 aa12.97□□□□□ -0.33
VHL-201ENST00000256474 NKX3-2P78367 333 aa12.97□□□□□ -0.33
VHL-201ENST00000256474 CCDC85BQ15834 202 aaPredicted RBP12.97□□□□□ -0.33
VHL-201ENST00000256474 PROX2Q3B8N5 592 aa12.97□□□□□ -0.33
VHL-201ENST00000256474 SPANXN2Q5MJ10 180 aa12.97□□□□□ -0.33
VHL-201ENST00000256474 PRSS48Q7RTY5 328 aa12.97□□□□□ -0.33
VHL-201ENST00000256474 C7orf57Q8NEG2 295 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms