RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 TCF19Q9Y242 345 aa3.78□□□□□ -1.8
HMGB1P5-201ENST00000255320 FOXA2Q9Y261 457 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P5-201ENST00000255320 ABCC9O60706 1549 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 A0A087WW49 117 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 A0A087WYN8 130 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 A0A087WZ39 114 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 A0A0U1RQG5 324 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 A0A1W2PR80 420 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 CCDC162PA2VCL2 907 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 A8MVM7 634 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 ZNF732B4DXR9 585 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 PRSS44E7EML9 344 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 RTCAO00442 366 aaKnown RBP3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 ZNF195O14628 629 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 BCAS2O75934 225 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 STBD1O95210 358 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 ABHD2P08910 425 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 CLCN4P51793 760 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 SMSP52788 366 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 KCNJ10P78508 379 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 SLC34A1Q06495 639 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 GPR50Q13585 617 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 GRB14Q14449 540 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 MAPK11Q15759 364 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 KRTAP24-1Q3LI83 254 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 RAB12Q6IQ22 244 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 C15orf52Q6ZUT6 534 aaKnown RBP3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 TRMT11Q7Z4G4 463 aaKnown RBP3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 ZNF619Q8N2I2 560 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 TEX26Q8N6G2 289 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 SMAP2Q8WU79 429 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 CCDC47Q96A33 483 aaKnown RBP3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 NECTIN4Q96NY8 510 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 PRAM1Q96QH2 718 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 F2RL3Q96RI0 385 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 FSD1Q9BTV5 496 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 PITPNM3Q9BZ71 974 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 NACAP1Q9BZK3 213 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 NAPBQ9H115 298 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 COMMD8Q9NX08 183 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 TMOD3Q9NYL9 352 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 HACD3Q9P035 362 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 TMEM181Q9P2C4 612 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 FETUBQ9UGM5 382 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 PSORS1C1Q9UIG5 152 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 TRMT6Q9UJA5 497 aaKnown RBP3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 SATB2Q9UPW6 733 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 NCKAP1Q9Y2A7 1128 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 EXOC6BQ9Y2D4 811 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 ZNF510Q9Y2H8 683 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 PYGO1Q9Y3Y4 419 aa3.77□□□□□ -1.81
HMGB1P5-201ENST00000255320 SLC15A5A6NIM6 579 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 SRRM4A7MD48 611 aaKnown RBP3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 CLN5O75503 358 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 GRAP2O75791 330 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 CXCL14O95715 111 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 AMBPP02760 352 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 HMBSP08397 361 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 NUDT17P0C025 328 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 TYMPP19971 482 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 GJB2P29033 226 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 CHRNB4P30926 498 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 OR1D2P34982 312 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 SOX3P41225 446 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 TNFSF10P50591 281 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 NR0B1P51843 470 aaKnown RBP3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 SLC12A3P55017 1021 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 STARD6P59095 220 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 LCP2Q13094 533 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 SGCGQ13326 291 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 MSLNQ13421 630 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 ITGA9Q13797 1035 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 EFTUD2Q15029 972 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 DUSP5Q16690 384 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 ZNF876PQ49A33 203 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 C17orf107Q6ZR85 190 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 Q6ZSR9 355 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 C1orf186Q6ZWK4 172 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 CUZD1Q86UP6 607 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 TCEANCQ8N8B7 351 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 FAM76AQ8TAV0 307 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 SEPT8Q92599 483 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 CASP10Q92851 521 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 DTD2Q96FN9 168 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 LURAP1Q96LR2 239 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 TMEM237Q96Q45 408 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 NKX3-1Q99801 234 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 FUCA2Q9BTY2 467 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 NYXQ9GZU5 481 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 IL19Q9UHD0 177 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 MOSPD1Q9UJG1 213 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 WDR37Q9Y2I8 494 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 ANGPTL3Q9Y5C1 460 aa3.76□□□□□ -1.81
HMGB1P5-201ENST00000255320 SPAG9O60271 1321 aaKnown RBP3.75□□□□□ -1.81
HMGB1P5-201ENST00000255320 NEDD4P46934 1319 aa3.75□□□□□ -1.81
HMGB1P5-201ENST00000255320 NPHP3Q7Z494 1330 aa3.75□□□□□ -1.81
HMGB1P5-201ENST00000255320 A0A087X002 238 aa3.75□□□□□ -1.81
HMGB1P5-201ENST00000255320 C2orf92A0A1B0GVN3 265 aa3.75□□□□□ -1.81
HMGB1P5-201ENST00000255320 GLTPD2A6NH11 291 aa3.75□□□□□ -1.81
HMGB1P5-201ENST00000255320 M0R296 226 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms