RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ZBTB20Q9HC78 741 aaPredicted RBP16.36■□□□□ 0.21
FOXA1-201ENST00000250448 TRPV5Q9NQA5 729 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 SAGE2PA6NJ88 616 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 PLK4O00444 970 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 UGT2B10P36537 528 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 PCYT1AP49585 367 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 TUBA1BP68363 451 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 CHRNA6Q15825 494 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 ZNF181Q2M3W8 571 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 FNDC3BQ53EP0 1204 aaKnown RBP16.36■□□□□ 0.21
FOXA1-201ENST00000250448 TUBA1AQ71U36 451 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 CACUL1Q86Y37 369 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 ZZZ3Q8IYH5 903 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 FAM9CQ8IZT9 166 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 APH1BQ8WW43 257 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 SELENOMQ8WWX9 145 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 FCGR1BQ92637 280 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 CHFRQ96EP1 664 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 SCRN2Q96FV2 425 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 ASB8Q9H765 288 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 POU2F3Q9UKI9 436 aa16.36■□□□□ 0.21
FOXA1-201ENST00000250448 TAF4O00268 1085 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 PCDHGA12O60330 932 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 LRATO95237 230 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 PAPLNO95428 1278 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 SDC1P18827 310 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 LIPAP38571 399 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 PTSQ03393 145 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 ARHGEF7Q14155 803 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 SYT16Q17RD7 645 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 ATAD3BQ5T9A4 648 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 TUBA3EQ6PEY2 450 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 TMEM184AQ6ZMB5 413 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 ZNF557Q8N988 423 aaPredicted RBP16.35■□□□□ 0.21
FOXA1-201ENST00000250448 HSH2DQ96JZ2 352 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 CTRCQ99895 268 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 CPEB1Q9BZB8 566 aaKnown RBP16.35■□□□□ 0.21
FOXA1-201ENST00000250448 REEP1Q9H902 201 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 SIRT5Q9NXA8 310 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 TBC1D3BA6NDS4 549 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 TBX1O43435 398 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 AIREO43918 545 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 TPPPO94811 219 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 C1QCP02747 245 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 GDI1P31150 447 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 ITGA1P56199 1179 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 RPP38P78345 283 aaKnown RBP16.35■□□□□ 0.21
FOXA1-201ENST00000250448 NPRL3Q12980 569 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 VMACQ2NL98 169 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 OR4F3Q6IEY1 312 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 FAHD1Q6P587 224 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 AKAP14Q86UN6 197 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 YAF2Q8IY57 180 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 PGBD3Q8N328 593 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 DNASE1L2Q92874 299 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 S1PR5Q9H228 398 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 RDH14Q9HBH5 336 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 LATS2Q9NRM7 1088 aa16.35■□□□□ 0.21
FOXA1-201ENST00000250448 AGAP5A6NIR3 686 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 ITGALP20701 1170 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 ST8SIA6P61647 398 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 RUNX3Q13761 415 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 GPRC6AQ5T6X5 926 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 MSANTD1Q6ZTZ1 278 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 USP45Q70EL2 814 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 ENTHD1Q8IYW4 607 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 POC5Q8NA72 575 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 THUMPD1Q9NXG2 353 aaKnown RBP16.34■□□□□ 0.21
FOXA1-201ENST00000250448 PABPN1LA6NDY0 278 aaKnown RBP16.34■□□□□ 0.21
FOXA1-201ENST00000250448 KPNA3O00505 521 aaPredicted RBP16.34■□□□□ 0.21
FOXA1-201ENST00000250448 DLGAP3O95886 979 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 LAMP2P13473 410 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 EPORP19235 508 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 MAPK1P28482 360 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 KDELR2P33947 212 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 GJA4P35212 333 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 OPRD1P41143 372 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 WASP42768 502 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 STEAP3Q658P3 488 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 TPRG1Q6ZUI0 275 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 RNF6Q9Y252 685 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 SLC27A6Q9Y2P4 619 aa16.34■□□□□ 0.21
FOXA1-201ENST00000250448 GLYATL1P3A0A0U1RQE8 302 aa16.33■□□□□ 0.21
FOXA1-201ENST00000250448 IGFBP4P22692 258 aa16.33■□□□□ 0.21
FOXA1-201ENST00000250448 LTBRP36941 435 aa16.33■□□□□ 0.21
FOXA1-201ENST00000250448 SEPHS1P49903 392 aa16.33■□□□□ 0.21
FOXA1-201ENST00000250448 NFATC2Q13469 925 aa16.33■□□□□ 0.21
FOXA1-201ENST00000250448 CAMK2GQ13555 558 aaPredicted RBP16.33■□□□□ 0.21
FOXA1-201ENST00000250448 ERICH5Q6P6B1 374 aa16.33■□□□□ 0.21
FOXA1-201ENST00000250448 EIF3MQ7L2H7 374 aaKnown RBP16.33■□□□□ 0.21
FOXA1-201ENST00000250448 COPS4Q9BT78 406 aa16.33■□□□□ 0.21
FOXA1-201ENST00000250448 C6orf62Q9GZU0 229 aaPredicted RBP16.33■□□□□ 0.21
FOXA1-201ENST00000250448 ELOVL6Q9H5J4 265 aa16.33■□□□□ 0.21
FOXA1-201ENST00000250448 IL36AQ9UHA7 158 aa16.33■□□□□ 0.21
FOXA1-201ENST00000250448 UGT2A1Q9Y4X1 527 aa16.33■□□□□ 0.21
FOXA1-201ENST00000250448 SCN8AQ9UQD0 1980 aa16.33■□□□□ 0.21
FOXA1-201ENST00000250448 PIKFYVEQ9Y2I7 2098 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 E9PQ18 207 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 CLIC1O00299 241 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 SNPHO15079 494 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms