RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 PAX3P23760 479 aa17.88■□□□□ 0.45
CHPF-201ENST00000243776 PFN3P60673 137 aa17.88■□□□□ 0.45
CHPF-201ENST00000243776 PRKCDQ05655 676 aa17.88■□□□□ 0.45
CHPF-201ENST00000243776 CDKN3Q16667 212 aa17.88■□□□□ 0.45
CHPF-201ENST00000243776 ARL14EPQ8N8R7 260 aaPredicted RBP17.88■□□□□ 0.45
CHPF-201ENST00000243776 CSGALNACT1Q8TDX6 532 aa17.88■□□□□ 0.45
CHPF-201ENST00000243776 TBC1D20Q96BZ9 403 aa17.88■□□□□ 0.45
CHPF-201ENST00000243776 TBC1D24Q9ULP9 559 aa17.88■□□□□ 0.45
CHPF-201ENST00000243776 PEX16Q9Y5Y5 336 aa17.88■□□□□ 0.45
CHPF-201ENST00000243776 TRBV5-4A0A0C4DH59 114 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 MGAT4DA6NG13 374 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 SOX6P35712 828 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 PTGES3Q15185 160 aaKnown RBP17.87■□□□□ 0.45
CHPF-201ENST00000243776 ZNF385BQ569K4 471 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 TXNDC8Q6A555 127 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 PTCHD4Q6ZW05 846 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 ASB11Q8WXH4 323 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 SGK2Q9HBY8 427 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 GPATCH2Q9NW75 528 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 TBC1D14Q9P2M4 693 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 DNMT3AQ9Y6K1 912 aaPredicted RBP17.87■□□□□ 0.45
CHPF-201ENST00000243776 HMGA1P17096 107 aaKnown RBP17.87■□□□□ 0.45
CHPF-201ENST00000243776 RPS19P39019 145 aaKnown RBP17.87■□□□□ 0.45
CHPF-201ENST00000243776 PRIM2P49643 509 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 FLT3LGP49771 235 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 NKX3-2P78367 333 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 C17orf99Q6UX52 265 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 OTOP2Q7RTS6 562 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 LRRC70Q7Z2Q7 622 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 WDR53Q7Z5U6 358 aaPredicted RBP17.87■□□□□ 0.45
CHPF-201ENST00000243776 ZFYVE19Q96K21 471 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 FAM129BQ96TA1 746 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 SLC12A9Q9BXP2 914 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 RAB23Q9ULC3 237 aa17.87■□□□□ 0.45
CHPF-201ENST00000243776 LHCGRP22888 699 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 ZNF157P51786 506 aaPredicted RBP17.86■□□□□ 0.45
CHPF-201ENST00000243776 SELENOWP63302 87 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 CSTF3Q12996 717 aaKnown RBP17.86■□□□□ 0.45
CHPF-201ENST00000243776 BAK1Q16611 211 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 TUBA3EQ6PEY2 450 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 AQP11Q8NBQ7 271 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 C11orf65Q8NCR3 313 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 OR6F1Q8NGZ6 308 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 UPF1Q92900 1129 aaKnown RBP eCLIP17.86■□□□□ 0.454e-7■■■■□ 22.2
CHPF-201ENST00000243776 TMEM203Q969S6 136 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 PKP4Q99569 1192 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 SLC30A2Q9BRI3 323 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 ZDHHC3Q9NYG2 299 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 DNAJC27Q9NZQ0 273 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 TET1Q8NFU7 2136 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 RFXAPO00287 272 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 KPNA5O15131 536 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 LRRTM2O43300 516 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 C6orf47O95873 294 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 CSF2P04141 144 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 CNR2P34972 360 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 PREPP48147 710 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 HBA1P69905 142 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 SSX1Q16384 188 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 POM121L1PQ3SYA9 428 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 ARMC4Q5T2S8 1044 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 NEK10Q6ZWH5 1172 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 LAX1Q8IWV1 398 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 PLD4Q96BZ4 506 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 VPS35Q96QK1 796 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 ZNF556Q9HAH1 456 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 TMPRSS11EQ9UL52 423 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 OR51B4Q9Y5P0 310 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 MYOFQ9NZM1 2061 aa17.86■□□□□ 0.45
CHPF-201ENST00000243776 XIRP2A4UGR9 3374 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 PRAMEF33A0A0G2JMD5 474 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 PRAMEF10O60809 474 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 SLC6A12P48065 614 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 PTSQ03393 145 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 PAQR6Q6TCH4 344 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 NPAS3Q8IXF0 933 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 L3MBTL4Q8NA19 623 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 TRMT61AQ96FX7 289 aaKnown RBP17.85■□□□□ 0.45
CHPF-201ENST00000243776 ANKHQ9HCJ1 492 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 PCDHB7Q9Y5E2 793 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 SCAMP2O15127 329 aaKnown RBP17.85■□□□□ 0.45
CHPF-201ENST00000243776 HOXC11O43248 304 aaPredicted RBP17.85■□□□□ 0.45
CHPF-201ENST00000243776 JUPP14923 745 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 PBLDP30039 288 aaPredicted RBP17.85■□□□□ 0.45
CHPF-201ENST00000243776 SSTR4P31391 388 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 SOAT1P35610 550 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 HTR3AP46098 478 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 AP1S1P61966 158 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 RAE1P78406 368 aaKnown RBP17.85■□□□□ 0.45
CHPF-201ENST00000243776 MEF2AQ02078 507 aaPredicted RBP17.85■□□□□ 0.45
CHPF-201ENST00000243776 LRRC74AQ0VAA2 488 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 MICAQ29983 383 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 MMP21Q8N119 569 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 SLC34A3Q8N130 599 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 CELF5Q8N6W0 485 aaKnown RBP17.85■□□□□ 0.45
CHPF-201ENST00000243776 DBF4BQ8NFT6 615 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 TP53INP1Q96A56 240 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 NECTIN4Q96NY8 510 aa17.85■□□□□ 0.45
CHPF-201ENST00000243776 KLF16Q9BXK1 252 aaPredicted RBP17.85■□□□□ 0.45
CHPF-201ENST00000243776 ASPNQ9BXN1 380 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms