RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 OTUD3Q5T2D3 398 aaPredicted RBP17.69■□□□□ 0.42
HOXC11-201ENST00000243082 KRT80Q6KB66 452 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 LPCAT2Q7L5N7 544 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 SLC44A3Q8N4M1 653 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 OR2A1Q8NGT9 310 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 CIDECQ96AQ7 238 aaPredicted RBP17.69■□□□□ 0.42
HOXC11-201ENST00000243082 PPCDCQ96CD2 204 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 MTERF3Q96E29 417 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 TRAPPC9Q96Q05 1148 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 F2RL3Q96RI0 385 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 PITHD1Q9GZP4 211 aaPredicted RBP17.69■□□□□ 0.42
HOXC11-201ENST00000243082 AHSPQ9NZD4 102 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 SCHIP1Q9P0W5 487 aaPredicted RBP17.69■□□□□ 0.42
HOXC11-201ENST00000243082 ZNF282Q9UDV7 671 aaPredicted RBP17.69■□□□□ 0.42
HOXC11-201ENST00000243082 PRAMEF33A0A0G2JMD5 474 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 PRSS38A1L453 326 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 GPR37L1O60883 481 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 SEMA3DO95025 777 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 SNAP29O95721 258 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 ABCB1P08183 1280 aaPredicted RBP17.69■□□□□ 0.42
HOXC11-201ENST00000243082 IL3P08700 152 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 HOXC4P09017 264 aaPredicted RBP17.69■□□□□ 0.42
HOXC11-201ENST00000243082 NUDT7P0C024 238 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 PPIBP23284 216 aaKnown RBP17.69■□□□□ 0.42
HOXC11-201ENST00000243082 ACSL1P33121 698 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 KDELR2P33947 212 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 BMP8BP34820 402 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 IST1P53990 364 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 CSNK1G2P78368 415 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 PRDX1Q06830 199 aaKnown RBP17.69■□□□□ 0.42
HOXC11-201ENST00000243082 APOFQ13790 326 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 IKBIPQ70UQ0 350 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 FKBP9P1Q75LS8 142 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 MMP21Q8N119 569 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 OR2L8Q8NGY9 312 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 MRPS26Q9BYN8 205 aaKnown RBP17.69■□□□□ 0.42
HOXC11-201ENST00000243082 KCNK12Q9HB15 430 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 SPASTQ9UBP0 616 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 SAMD4AQ9UPU9 718 aaKnown RBP17.69■□□□□ 0.42
HOXC11-201ENST00000243082 PDZK1P1A8MUH7 402 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 RTCAO00442 366 aaKnown RBP17.68■□□□□ 0.42
HOXC11-201ENST00000243082 LCMT2O60294 686 aaKnown RBP17.68■□□□□ 0.42
HOXC11-201ENST00000243082 H6PDO95479 791 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 C6orf47O95873 294 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 CLPTM1O96005 669 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 ACADMP11310 421 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 HOXB6P17509 224 aaKnown RBP17.68■□□□□ 0.42
HOXC11-201ENST00000243082 NDUFV2P19404 249 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 BSGP35613 385 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 MAGEA2P43356 314 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 ALDH3A2P51648 485 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 KIAA1024LP59773 190 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 DAG1Q14118 895 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 RPE65Q16518 533 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 LRRC23Q53EV4 343 aaPredicted RBP17.68■□□□□ 0.42
HOXC11-201ENST00000243082 ADGRF3Q8IZF5 1079 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 DHRSXQ8N5I4 330 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 OR52E1Q8NGJ3 308 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 RPLP0P6Q8NHW5 317 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 CYGBQ8WWM9 190 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 SPATA9Q9BWV2 254 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 MVB12BQ9H7P6 319 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 CD320Q9NPF0 282 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 GPATCH2Q9NW75 528 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 CORO2BQ9UQ03 480 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 CA5BQ9Y2D0 317 aa17.68■□□□□ 0.42
HOXC11-201ENST00000243082 H3BNH8 94 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 H3BQ06 376 aaPredicted RBP17.67■□□□□ 0.42
HOXC11-201ENST00000243082 NTRK1P04629 796 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 ALPLP05186 524 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 SERPINB1P30740 379 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 CAPGP40121 348 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 MVDP53602 400 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 VAC14Q08AM6 782 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 VEZF1Q14119 521 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 KRT33BQ14525 404 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.67■□□□□ 0.42
HOXC11-201ENST00000243082 CCNYL2Q5T2Q4 361 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 KIAA1324Q6UXG2 1013 aaKnown RBP17.67■□□□□ 0.42
HOXC11-201ENST00000243082 ZNF852Q6ZMS4 543 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 GALNT10Q86SR1 603 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 STK32CQ86UX6 486 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 ZDHHC13Q8IUH4 622 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 ZCCHC7Q8N3Z6 543 aaKnown RBP17.67■□□□□ 0.42
HOXC11-201ENST00000243082 FBXL20Q96IG2 436 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 OR2M4Q96R27 311 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 LHX9Q9NQ69 397 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 CD207Q9UJ71 328 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 PADI4Q9UM07 663 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 ICKQ9UPZ9 632 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 SHISA7A6NL88 538 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 G3V2T6 193 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 H0Y8X5 98 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 OR1F1O43749 312 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 PRICKLE3O43900 615 aaPredicted RBP17.67■□□□□ 0.42
HOXC11-201ENST00000243082 ZNF682O95780 498 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 CLIC3O95833 236 aa17.67■□□□□ 0.42
HOXC11-201ENST00000243082 PABPC4LP0CB38 370 aaKnown RBP17.67■□□□□ 0.42
HOXC11-201ENST00000243082 ADARB1P78563 741 aaKnown RBP17.67■□□□□ 0.42
HOXC11-201ENST00000243082 TPRG1LQ5T0D9 272 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms