RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 CATSPEREQ5SY80 951 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 MLIPQ5VWP3 458 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 CXorf40BQ96DE9 158 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 PKP4Q99569 1192 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 ZSCAN5AQ9BUG6 496 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 DCSTAMPQ9H295 470 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 RC3H2Q9HBD1 1191 aaKnown RBP15.65■□□□□ 0.1
LTBR-201ENST00000228918 FKBP14Q9NWM8 211 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 SH3BP4Q9P0V3 963 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 DOCK6Q96HP0 2047 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 SLC5A10A0PJK1 596 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 NEDD8-MDP1E9PL57 170 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 M0R082 166 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 HLA-EP13747 358 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 C21orf33P30042 268 aaPredicted RBP15.64■□□□□ 0.09
LTBR-201ENST00000228918 SYT16Q17RD7 645 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 COX20Q5RI15 118 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 ZNF852Q6ZMS4 543 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 PLEKHG7Q6ZR37 379 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 PAGE2Q7Z2X7 111 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 DNAJC22Q8N4W6 341 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 SLC5A8Q8N695 610 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 RASGEF1AQ8N9B8 481 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 OR10G2Q8NGC3 310 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 OR4C15Q8NGM1 316 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 PROX1Q92786 737 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 BHLHE41Q9C0J9 482 aaPredicted RBP15.64■□□□□ 0.09
LTBR-201ENST00000228918 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.64■□□□□ 0.09
LTBR-201ENST00000228918 ATP6V1HQ9UI12 483 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 PNMA8BQ9ULN7 279 aaPredicted RBP15.64■□□□□ 0.09
LTBR-201ENST00000228918 ZBBXA8MT70 800 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 LILRB3O75022 631 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 TNFRSF21O75509 655 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 OXSR1O95747 527 aaPredicted RBP15.64■□□□□ 0.09
LTBR-201ENST00000228918 ETFAP13804 333 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 ZNF8P17098 575 aaPredicted RBP15.64■□□□□ 0.09
LTBR-201ENST00000228918 LAG3P18627 525 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 TNFRSF1BP20333 461 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 SLC19A1P41440 591 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 CRATP43155 626 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 RECQLP46063 649 aaPredicted RBP15.64■□□□□ 0.09
LTBR-201ENST00000228918 PRLHRP49683 370 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 DEPDC1Q5TB30 811 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 SLCO4C1Q6ZQN7 724 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 TMPRSS11BQ86T26 416 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 CCDC103Q8IW40 242 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 GOT1L1Q8NHS2 421 aaPredicted RBP15.64■□□□□ 0.09
LTBR-201ENST00000228918 MCFD2Q8NI22 146 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 BTN2A2Q8WVV5 523 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 MYLIPQ8WY64 445 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 NEIL2Q969S2 332 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 SAMD11Q96NU1 681 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 ZBTB20Q9HC78 741 aaPredicted RBP15.64■□□□□ 0.09
LTBR-201ENST00000228918 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.64■□□□□ 0.09
LTBR-201ENST00000228918 TSC22D4Q9Y3Q8 395 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 PCDHGA2Q9Y5H1 932 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 ALPK3Q96L96 1907 aa15.64■□□□□ 0.09
LTBR-201ENST00000228918 AQP9O43315 295 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 ATG13O75143 517 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 LEFTY1O75610 366 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 CDK1P06493 297 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 CD40LGP29965 261 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 UGT2B10P36537 528 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 CLK1P49759 484 aaKnown RBP15.63■□□□□ 0.09
LTBR-201ENST00000228918 HBA1P69905 142 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 ZNF763Q0D2J5 394 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 IFI44LQ53G44 452 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 AGAP7PQ5VUJ5 663 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 MED27Q6P2C8 311 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 CNKSR3Q6P9H4 555 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 ANGPTL8Q6UXH0 198 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 ADIPOR2Q86V24 386 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 CADM3Q8N126 398 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 RHOXF1Q8NHV9 184 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 MYDGFQ969H8 173 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 REEP4Q9H6H4 257 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 PRM3Q9NNZ6 103 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 RLIMQ9NVW2 624 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 POFUT2Q9Y2G5 429 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 TSPAN11A1L157 253 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 CLCA1A8K7I4 914 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 AIREO43918 545 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 EIF2DP41214 584 aaKnown RBP15.63■□□□□ 0.09
LTBR-201ENST00000228918 PPP5CP53041 499 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 ATN1P54259 1190 aaPredicted RBP15.63■□□□□ 0.09
LTBR-201ENST00000228918 PNLIPRP1P54315 467 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 CASP9P55211 416 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 TUBA1BP68363 451 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 SPIBQ01892 262 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 FCHO2Q0JRZ9 810 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 DNASE1L3Q13609 305 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 TIGD6Q17RP2 521 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 ZNF284Q2VY69 593 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 GCNT6Q5T4J0 391 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 TUBA1AQ71U36 451 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 OTOP2Q7RTS6 562 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 OR4K1Q8NGD4 311 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.63■□□□□ 0.094e-6■■□□□ 13.7
LTBR-201ENST00000228918 GGHQ92820 318 aa15.63■□□□□ 0.09
LTBR-201ENST00000228918 GLYATL1Q969I3 302 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms