RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 BOLLQ8N9W6 283 aaKnown RBP14.15□□□□□ -0.14
PTPRA-201ENST00000216877 NANPQ8TBE9 248 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 KLHL5Q96PQ7 755 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 INPP5KQ9BT40 448 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 SLC25A37Q9NYZ2 338 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 SPIN1Q9Y657 262 aaPredicted RBP14.15□□□□□ -0.14
PTPRA-201ENST00000216877 hCG_1807616A0A1W2PRN6 198 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 LCHNA4D1U4 455 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 LRRTM2O43300 516 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 RD3LP0DJH9 198 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 MTHFD2P13995 350 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 MCCD1P59942 119 aaPredicted RBP14.14□□□□□ -0.15
PTPRA-201ENST00000216877 LGALS3BPQ08380 585 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 B3GLCTQ6Y288 498 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 ZNF367Q7RTV3 350 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 GPSM1Q86YR5 675 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 TMEM145Q8NBT3 493 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 MINDY3Q9H8M7 445 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 SP110Q9HB58 689 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 ZNF112Q9UJU3 913 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 HCN2Q9UL51 889 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 COL1A2P08123 1366 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 MYO10Q9HD67 2058 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 A0A0A6YYJ9 748 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 LINC00587B1AMM8 73 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 SH3BGRLO75368 114 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 NDUFS3O75489 264 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 GKP32189 559 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 GPR17Q13304 367 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 CATSPERGQ6ZRH7 1159 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 GPR149Q86SP6 731 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 GPALPP1Q8IXQ4 340 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 SCRN2Q96FV2 425 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 ABCG5Q9H222 651 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 ACTR10Q9NZ32 417 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 RCOR3Q9P2K3 495 aaPredicted RBP14.14□□□□□ -0.15
PTPRA-201ENST00000216877 SLC35F4A4IF30 521 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 H3BN98 237 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 ACKR2O00590 384 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 RFXANKO14593 260 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 MUSKO15146 869 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 NPPAP01160 153 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 GNPDA1P46926 289 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 CDC42P60953 191 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 SPHARQ15513 63 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 SSX1Q16384 188 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 RETSATQ6NUM9 610 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 ZNF613Q6PF04 617 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 ZDHHC17Q8IUH5 632 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 UXS1Q8NBZ7 420 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 OR10G2Q8NGC3 310 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 MARVELD3Q96A59 401 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 C12orf66Q96MD2 445 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 HTATIP2Q9BUP3 242 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 PRKD2Q9BZL6 878 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 ABHD16BQ9H3Z7 469 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 PIGUQ9H490 435 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 ABT1Q9ULW3 272 aaKnown RBP14.14□□□□□ -0.15
PTPRA-201ENST00000216877 PADI2Q9Y2J8 665 aa14.14□□□□□ -0.15
PTPRA-201ENST00000216877 F8W036 122 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 ADAMDEC1O15204 470 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 HNF1BP35680 557 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 RIN1Q13671 783 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 SPOUT1Q5T280 376 aaKnown RBP14.13□□□□□ -0.15
PTPRA-201ENST00000216877 GPAT4Q86UL3 456 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 ADGRG3Q86Y34 549 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 DPP10Q8N608 796 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 OR7G3Q8NG95 312 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 C2CD4CQ8TF44 421 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 TNIP3Q96KP6 325 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 KLHL15Q96M94 604 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 ZIC5Q96T25 663 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 GPR21Q99679 349 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 NXF3Q9H4D5 531 aaKnown RBP14.13□□□□□ -0.15
PTPRA-201ENST00000216877 DPP7Q9UHL4 492 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 PDCD5O14737 125 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 PTP4A3O75365 173 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 PEX14O75381 377 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 NCR1O76036 304 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 CCNB2O95067 398 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 TPOP07202 933 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 ABRAXAS2Q15018 415 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 COL28A1Q2UY09 1125 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 MPP7Q5T2T1 576 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 GPR139Q6DWJ6 353 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 ISG20Q96AZ6 181 aaKnown RBP14.13□□□□□ -0.15
PTPRA-201ENST00000216877 TINAGL1Q9GZM7 467 aaPredicted RBP14.13□□□□□ -0.15
PTPRA-201ENST00000216877 RLIMQ9NVW2 624 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 NOD1Q9Y239 953 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 ASB1Q9Y576 335 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 AKAP8O43823 692 aaKnown RBP14.13□□□□□ -0.15
PTPRA-201ENST00000216877 IL6P05231 212 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 RAB3BP20337 219 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 VIPR1P32241 457 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 ZFP36L2P47974 494 aaKnown RBP14.13□□□□□ -0.15
PTPRA-201ENST00000216877 ATP12AP54707 1039 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 ERVPABLB-1P60509 514 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 TTLL4Q14679 1199 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 IQCCQ4KMZ1 466 aa14.13□□□□□ -0.15
PTPRA-201ENST00000216877 CLLU1Q5K131 121 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms