RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 CARS2Q9HA77 564 aaKnown RBP11.74□□□□□ -0.53
SNU13-201ENST00000215956 WASH6PQ9NQA3 447 aa11.74□□□□□ -0.53
SNU13-201ENST00000215956 GPR27Q9NS67 375 aa11.74□□□□□ -0.53
SNU13-201ENST00000215956 STARD5Q9NSY2 213 aa11.74□□□□□ -0.53
SNU13-201ENST00000215956 WDR70Q9NW82 654 aa11.74□□□□□ -0.53
SNU13-201ENST00000215956 ATXN7L1Q9ULK2 861 aaPredicted RBP11.74□□□□□ -0.53
SNU13-201ENST00000215956 RUVBL1Q9Y265 456 aaKnown RBP11.74□□□□□ -0.53
SNU13-201ENST00000215956 AP3M1Q9Y2T2 418 aa11.74□□□□□ -0.53
SNU13-201ENST00000215956 TDRKHQ9Y2W6 561 aaKnown RBP11.74□□□□□ -0.53
SNU13-201ENST00000215956 PIKFYVEQ9Y2I7 2098 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 PDZK1P1A8MUH7 402 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 A8MUI8 341 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 FOXE1O00358 373 aaPredicted RBP11.73□□□□□ -0.53
SNU13-201ENST00000215956 EFSO43281 561 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 DNAJA2O60884 412 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 CCNDBP1O95273 360 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 CSF2P04141 144 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 IL6P05231 212 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 G6PDP11413 515 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 NME1P15531 152 aaKnown RBP11.73□□□□□ -0.53
SNU13-201ENST00000215956 NPPBP16860 134 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 AP2B1P63010 937 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 HMGCS1Q01581 520 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 TSTA3Q13630 321 aaPredicted RBP11.73□□□□□ -0.53
SNU13-201ENST00000215956 DPY19L1Q2PZI1 675 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 RFTN2Q52LD8 501 aaPredicted RBP11.73□□□□□ -0.53
SNU13-201ENST00000215956 SPIN4Q56A73 249 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 NXPE4Q6UWF7 544 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 RIPOR1Q6ZS17 1223 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 MSANTD1Q6ZTZ1 278 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 PARGQ86W56 976 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 C17orf64Q86WR6 236 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 DCP2Q8IU60 420 aaKnown RBP11.73□□□□□ -0.53
SNU13-201ENST00000215956 LRRC56Q8IYG6 542 aaPredicted RBP11.73□□□□□ -0.53
SNU13-201ENST00000215956 ENDOVQ8N8Q3 282 aaKnown RBP11.73□□□□□ -0.53
SNU13-201ENST00000215956 OR5AR1Q8NGP9 310 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 OR9I1Q8NGQ6 314 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 WDR20Q8TBZ3 569 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 ARHGAP9Q9BRR9 750 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 GEMIN8Q9NWZ8 242 aaKnown RBP11.73□□□□□ -0.53
SNU13-201ENST00000215956 TRNAU1APQ9NX07 287 aaKnown RBP11.73□□□□□ -0.53
SNU13-201ENST00000215956 ADA2Q9NZK5 511 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 STOML1Q9UBI4 398 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 VPS29Q9UBQ0 182 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 GIMAP2Q9UG22 337 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 PPT2Q9UMR5 302 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 NBASA2RRP1 2371 aa11.73□□□□□ -0.53
SNU13-201ENST00000215956 CCDC187A0A096LP49 1063 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 PRR19A6NJB7 356 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 FBP2O00757 339 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 VARSP26640 1264 aaKnown RBP11.72□□□□□ -0.53
SNU13-201ENST00000215956 PIK3CBP42338 1070 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 ASMTP46597 345 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 GTF2A1P52655 376 aaPredicted RBP11.72□□□□□ -0.53
SNU13-201ENST00000215956 PDX1P52945 283 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 NME5P56597 212 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 CLDN8P56748 225 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 UFM1P61960 85 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 TRAP1Q12931 704 aaKnown RBP11.72□□□□□ -0.53
SNU13-201ENST00000215956 NFYCQ13952 458 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 FZD2Q14332 565 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 NR0B2Q15466 257 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 VPS26BQ4G0F5 336 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 PIGGQ5H8A4 983 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 ICE2Q659A1 982 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 ZNF574Q6ZN55 896 aaPredicted RBP11.72□□□□□ -0.53
SNU13-201ENST00000215956 PACS2Q86VP3 889 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 LAS2Q8IYD9 372 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 LIX1Q8N485 282 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 TBC1D19Q8N5T2 526 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 PPFIBP2Q8ND30 876 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 PROKR1Q8TCW9 393 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 NEIL2Q969S2 332 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 MTFMTQ96DP5 389 aaKnown RBP11.72□□□□□ -0.53
SNU13-201ENST00000215956 BMFQ96LC9 184 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 OR4K3Q96R72 315 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 AIF1LQ9BQI0 150 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 TRIM15Q9C019 465 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 MUC13Q9H3R2 512 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 NT5DC2Q9H857 520 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 RMND5AQ9H871 391 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 FARSBQ9NSD9 589 aaKnown RBP11.72□□□□□ -0.53
SNU13-201ENST00000215956 SUCOQ9UBS9 1254 aaKnown RBP11.72□□□□□ -0.53
SNU13-201ENST00000215956 PSMD13Q9UNM6 376 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 POMPQ9Y244 141 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 KCNK6Q9Y257 313 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 CSNK1G3Q9Y6M4 447 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 UNC13CQ8NB66 2214 aa11.72□□□□□ -0.53
SNU13-201ENST00000215956 SPTY2D1-AS1A0A0U1RR47 76 aa11.71□□□□□ -0.53
SNU13-201ENST00000215956 POM121BA6NF01 834 aa11.71□□□□□ -0.53
SNU13-201ENST00000215956 AQP9O43315 295 aa11.71□□□□□ -0.53
SNU13-201ENST00000215956 SUV39H1O43463 412 aa11.71□□□□□ -0.53
SNU13-201ENST00000215956 PSMG1O95456 288 aa11.71□□□□□ -0.53
SNU13-201ENST00000215956 TNFP01375 233 aa11.71□□□□□ -0.53
SNU13-201ENST00000215956 NTRK1P04629 796 aa11.71□□□□□ -0.53
SNU13-201ENST00000215956 ITGB2P05107 769 aa11.71□□□□□ -0.53
SNU13-201ENST00000215956 PCNAP12004 261 aa11.71□□□□□ -0.53
SNU13-201ENST00000215956 AMD1P17707 334 aa11.71□□□□□ -0.53
SNU13-201ENST00000215956 DDX5P17844 614 aaKnown RBP11.71□□□□□ -0.53
SNU13-201ENST00000215956 CAPN3P20807 821 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms