RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 PITPNAQ00169 270 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 TAS1R3Q7RTX0 852 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 VTCN1Q7Z7D3 282 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 ZNF761Q86XN6 746 aaPredicted RBP13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 ERVK13-1Q9NX77 482 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 SPEF1Q9Y4P9 236 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 BOLA2-SMG1P6H3BVE0 249 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 ABLIM1O14639 778 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 FANCGO15287 622 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 KCNJ5P48544 419 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 FXYD6P3P58550 94 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 GPM6BQ13491 265 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 PUS10Q3MIT2 529 aaKnown RBP13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 EIPR1Q53HC9 387 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 CCDC36Q8IYA8 594 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 SDR16C5Q8N3Y7 309 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 FUZQ9BT04 418 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 GPR88Q9GZN0 384 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 SOCS2O14508 198 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 EOMESO95936 686 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 ACADVLP49748 655 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 FKBP1BP68106 108 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 RAB39AQ14964 217 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 XKRXQ6PP77 449 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 TMEM110Q86TL2 294 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 TMEM151AQ8N4L1 468 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 GLB1L3Q8NCI6 653 aaPredicted RBP13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 OR5J2Q8NH18 312 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 TRIB2Q92519 343 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 HIST1H2AAQ96QV6 131 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 KCNK12Q9HB15 430 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 EVA1BQ9NVM1 165 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 K7ERQ8 282 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 ENPP6Q6UWR7 440 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 OR4N5Q8IXE1 308 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 DDX1Q92499 740 aaKnown RBP13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 RNF6Q9Y252 685 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 DLGAP4Q9Y2H0 992 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 NOP16Q9Y3C1 178 aaKnown RBP13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 HYKKA2RU49 373 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 SCDO00767 359 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 CSNK2A2P19784 350 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 TLE2Q04725 743 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 GPRC6AQ5T6X5 926 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 NOXRED1Q6NXP6 359 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 C12orf76Q8N812 135 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 TMCO6Q96DC7 493 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 CD244Q9BZW8 370 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 CALML5Q9NZT1 146 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 HCN3Q9P1Z3 774 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 KANTRA0A1W2PQU2 76 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 HERC3Q15034 1050 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 RUNDC3AQ59EK9 446 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 ZNF431Q8TF32 576 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 TFGQ92734 400 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 MAL2Q969L2 176 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 IGSF8Q969P0 613 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 TSPAN18Q96SJ8 248 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 C2orf78A6NCI8 922 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 H0YGN5 161 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 UBXN7O94888 489 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 ABRAXAS2Q15018 415 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 ZNF572Q7Z3I7 529 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 WDR20Q8TBZ3 569 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 FANK1Q8TC84 345 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 ISOC1Q96CN7 298 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 BCO2Q9BYV7 579 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 NFS1Q9Y697 457 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 SLIT3O75094 1523 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 VIRMAQ69YN4 1812 aaKnown RBP13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 HNF1BP35680 557 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 TMEM107Q6UX40 140 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 LHFPL3Q86UP9 236 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 CRELD1Q96HD1 420 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 GPR22Q99680 433 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 CCDC106Q9BWC9 280 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 MARCH4Q9P2E8 410 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 COQ4Q9Y3A0 265 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 MYH3P11055 1940 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 TMEM150CB9EJG8 249 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 PDCD5O14737 125 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 HTRA2O43464 458 aaPredicted RBP13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 ACVR1BP36896 505 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 CDH11P55287 796 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 EEFSECP57772 596 aaKnown RBP13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 GOLGA4Q13439 2230 aaKnown RBP13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 C1orf61Q13536 156 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 NANOGP8Q6NSW7 305 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 AGTRAPQ6RW13 159 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 LRRTM4Q86VH4 590 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 CENPSQ8N2Z9 138 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 NANOGQ9H9S0 305 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 SACM1LQ9NTJ5 587 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 C5AR2Q9P296 337 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 SARDHQ9UL12 918 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 POFUT2Q9Y2G5 429 aa13.16□□□□□ -0.3
TGFBR3-201ENST00000212355 KNDC1Q76NI1 1749 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms