RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Adam28Q9JLN6 793 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 HnrnpfQ9Z2X1 415 aaKnown RBP9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Lama4P97927 1816 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Nt5c1aA3KFX0 365 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Armc4B2RY50 1037 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Gm5798F7BTS7 198 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Vmn2r97K7N6Z2 861 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Phox2bO35690 314 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 C1qbP14106 253 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 TktP40142 623 aaKnown RBP9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Rpl6P47911 296 aaKnown RBP9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 ptchd1Q14B62 888 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Tbc1d24Q3UUG6 561 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Rcbtb1Q6NXM2 531 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 HjurpQ6PG16 667 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 LsampQ8BLK3 341 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Cfap20Q8BTU1 193 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Lmo3Q8BZL8 145 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Dennd2dQ91VV4 469 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 MlycdQ99J39 492 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Sec13Q9D1M0 322 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 GmprQ9DCZ1 345 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Rsc1a1Q9ER99 582 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Uchl1Q9R0P9 223 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Slc23a1Q9Z2J0 605 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Pik3c2aQ61194 1686 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Gsg1lD3Z7H4 322 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 AU018091E9PWS4 684 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Dbx2F8VQH7 377 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Btg4O70552 250 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 F2P19221 618 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 AhcyP50247 432 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Bop1P97452 732 aaKnown RBP9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Lgals3bpQ07797 577 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Tnfaip8l3Q3TBL6 204 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Uimc1Q5U5Q9 727 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Polr2mQ6P6I6 366 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Dusp16Q6PCP3 660 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Wdr48Q8BH57 676 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Olfr525Q8VGL5 309 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Fam118aQ91YN1 357 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Hm13Q9D8V0 378 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Nek7Q9ES74 302 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Lbx2Q9WUN8 195 aa9.1□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Sh3pxd2bA2AAY5 908 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Zar1lC3VD30 291 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Acp4D3YTS9 425 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Gm3159K7N760 267 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Tcf3P15806 651 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Slc1a5P51912 553 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Rhox5P52651 210 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Hcrtr1P58307 416 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 SbplQ3TUY3 232 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 StradaQ3UUJ4 431 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 StgQ8BM15 349 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Fam92aQ8BP22 355 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Fam78aQ8C552 283 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Naa10Q9QY36 235 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Asb4Q9WV71 426 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Klrc1Q9Z202 244 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Chd2E9PZM4 1827 aaKnown RBP9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 TomtA1Y9I9 258 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Pgap3A2A559 320 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Galntl6E5D8G1 601 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Bcl2a1dO55179 172 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Atp1b2P14231 290 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Epha1Q60750 977 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Syt14Q7TN84 555 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Doc2aQ7TNF0 405 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Itln1bQ80ZA0 313 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Lrch3Q8BVU0 778 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Dpep2Q8C255 478 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Wdr73Q9CWR1 371 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Mrpl17Q9D8P4 176 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Tvp23bQ9D8T4 205 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Subh2bvQ9D9Z7 123 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Fank1Q9DAM9 344 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Cyp2d22Q9JKY7 500 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Olfr1215A3KGY3 312 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Olfr738L7N1X7 311 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Gm5724L7N264 670 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Slc28a2O88627 660 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Dpf3P58269 378 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Nxpe2Q3U095 558 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Lmf1Q3U3R4 574 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Osbp2Q5QNQ6 908 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Gm5346Q7M766 736 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Psmf1Q8BHL8 271 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Lrrc66Q8K0B3 872 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Ccm2Q8K2Y9 453 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Aimp2Q8R010 320 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Rnf130Q8VEM1 419 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Coro6Q920M5 471 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Dhrs7bQ99J47 323 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Irs2P81122 1321 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Gm3099J3QPA5 205 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Cbfa2t3O54972 620 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Ctla2bP12400 113 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 ThpoP40226 356 aa9.09□□□□□ -0.95
Prpf40a-201ENSMUST00000076313 Rps13P62301 151 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms