RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Sult2a8Q8BGL3 282 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ap5m1Q8BJ63 490 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Aoc1Q8JZQ5 751 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Map4k3Q99JP0 894 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tex46Q9CPU3 165 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Akr1e2Q9DCT1 301 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Skint1A7TZE6 364 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Kcnc2Q14B80 642 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gpr165Q3V3A3 455 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 RgnQ64374 299 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Lingo3Q6GQU6 589 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rab9bQ8BHH2 201 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Nlgn3Q8BYM5 825 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Havcr2Q8VIM0 281 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Glod4Q9CPV4 298 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Padi3Q9Z184 664 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cntnap5aQ0V8T9 1304 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Mterf1bB9EJ57 379 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Adgrf2E9Q4J9 644 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Arhgap40E9Q6X9 672 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ackr2O08707 378 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Chrna4O70174 629 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Vmn1r223Q5SSA0 361 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Mterf1aQ8CHZ9 379 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ca12Q8CI85 354 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gpat4Q8K2C8 456 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr1310Q8VF85 312 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Pcdhgc3Q91XX1 934 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cldn22Q9D7U6 220 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr938Q9EQ93 315 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Jam2Q9JI59 298 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Vmn1r49Q9WUF1 310 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm6685D3YYP3 228 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 H2-T24F8VQG4 363 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Esp34G3UXG0 151 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Csnk2a2O54833 350 aaKnown RBP11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Pdcd1Q02242 288 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Spata48Q5NC83 441 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Abhd13Q80UX8 337 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cdkl3Q8BLF2 595 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Phtf2Q8CB19 747 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 FbrsQ8R089 466 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Mrps23Q8VE22 177 aaKnown RBP11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Hacl1Q9QXE0 581 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Npc1O35604 1277 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rnf13O54965 381 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cd70O55237 195 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rps2P25444 293 aaKnown RBP11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Eif1axQ8BMJ3 144 aaKnown RBP11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Zcchc3Q8BPK2 400 aaKnown RBP11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Hsbp1Q9CQZ1 76 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Clic1Q9Z1Q5 241 aaKnown RBP11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 A0A286YD17 136 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Galntl6E5D8G1 601 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Spaca6E9Q8Q8 339 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 ptchd1Q14B62 888 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Dctn4Q8CBY8 467 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cant1Q8VCF1 403 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr692Q8VF03 329 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 3110001I22RikQ9CZ70 312 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Alg14Q9D081 217 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Q9DAR0 182 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Enpp2Q9R1E6 862 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Adamts7Q68SA9 1657 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gsg1lD3Z7H4 322 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 SmgcF6VRN1 385 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Kcns2O35174 477 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Kcnj13P86046 360 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Nell2Q61220 819 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Pycr2Q922Q4 320 aaKnown RBP11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 ProzQ9CQW3 399 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Fam122aQ9DB52 284 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 AspdhQ9DCQ2 287 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 NmuQ9QXK8 174 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Lrrc72A0A1Y7VMI0 288 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Klhl15A2AAX3 604 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm6592A2AHC7 168 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Top6blJ3QMY9 579 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ebf2O08792 575 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Klrg2Q3UM83 387 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 AtminQ6P9S1 818 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Sp8Q8BMJ8 486 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Dennd1aQ8K382 1016 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Sult1c2Q9D939 296 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm2035J3QP87 144 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Adam19O35674 920 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Nthl1O35980 300 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Slc10a3P21129 473 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Trcg1Q58Y74 825 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Aifm2Q8BUE4 373 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr525Q8VGL5 309 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Auts2A0A087WPF7 1261 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Vmn2r114E9Q281 856 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ctla2aP12399 137 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Carns1Q6ZPS2 827 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cml2Q8CHQ9 238 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 9030624G23RikQ9D308 155 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Praf2Q9JIG8 178 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Upk1bQ9Z2C6 260 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 H2-BlV9GXR0 257 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms