RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Gm3139J3QK78 481 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm3106J3QPH3 481 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Olfr6P34986 316 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Fbln1Q08879 705 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gpr142Q7TQN9 365 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Marc2Q922Q1 338 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Sec61a2Q9JLR1 476 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 DstnQ9R0P5 165 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Ift172Q6VH22 1749 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Galntl6E5D8G1 601 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Btbd16E9Q173 522 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 2010300C02RikE9Q3M9 1175 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Got2P05202 430 aaKnown RBP13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 MedagQ14BA6 303 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Ppp3r2Q63811 179 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Adh7Q64437 374 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 MepceQ8K3A9 666 aaKnown RBP13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Exosc5Q9CRA8 235 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Kcns2O35174 477 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Slc16a3P57787 470 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Idh3gP70404 393 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Pld5Q3UNN8 536 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Ca12Q8CI85 354 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Ifi27l2bQ8VC49 283 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Olfr998Q8VF76 314 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Nudt8Q9CR24 210 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Leng1Q9DB98 261 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Kcnip3Q9QXT8 256 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Nufip1Q9QXX8 484 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Psmb3Q9R1P1 205 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Tle2Q9WVB2 767 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm21936A0A1Y7VJE9 144 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Vmn2r59E9PUT5 865 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm8369E9PZI3 166 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Obox6G3X9U1 347 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm14496K7N5U4 849 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm3633L7N233 213 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm9611L7N476 213 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 DmpkP54265 631 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 WasP70315 520 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Mocs1Q5RKZ7 636 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Trmt2bQ8BQJ6 493 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Tgif2Q8C0Y1 237 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Dus1lQ8C2P3 475 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Rhbdl1Q8VC82 373 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Olfr1176Q8VG40 315 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Zcchc10Q9CX48 178 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Copz2Q9JHH9 205 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Sertad2Q9JJG5 309 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm45692D3Z0A0 150 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Calhm3J3QMI4 347 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Dnase1l3O55070 310 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Tp63O88898 680 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Ndst2P52850 883 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Muc3aQ3U5A2 218 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Olfr318Q5NCD7 306 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Zmiz1Q6P1E1 1072 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Rad54bQ6PFE3 886 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 MkxQ8BIA3 353 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Plekhn1Q8C886 359 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Pcdha2Q91Y17 948 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Kcnq4Q9JK97 696 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Vamp5Q9Z2P8 102 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Nt5c1aA3KFX0 365 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Grik2P39087 908 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Rpl6P47911 296 aaKnown RBP13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 GscQ02591 256 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 PkdccQ5RJI4 492 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Fzd4Q61088 537 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 LsampQ8BLK3 341 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Tusc3Q8BTV1 347 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Nudt17Q9CWD3 296 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm7951E9Q0A2 213 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm6482F6YHC1 213 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Syn1O88935 706 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Ido1P28776 407 aaKnown RBP13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 AbraclQ4KML4 81 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm5416Q6IE28 97 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Abhd10Q6PE15 297 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Psmd13Q9WVJ2 376 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 CK137956B1AYM9 596 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm17124F6ZIG1 213 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm21800J3QMJ9 180 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Dusp8O09112 663 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 PpibP24369 216 aaKnown RBP13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Ufd1P70362 307 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gnb3Q61011 340 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Lrrc56Q8K375 552 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Nprl3Q8VIJ8 569 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Cd209dQ91ZW8 237 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Fam122aQ9DB52 284 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Vmn2r85G3UW56 850 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Olfr1121L7MTT1 314 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Cops5O35864 334 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Csn1s2bP02664 143 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Cml2Q8CHQ9 238 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Scpep1Q920A5 452 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Slc8b1Q925Q3 585 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 SvbpQ99LQ4 66 aa13.56□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Tex46Q9CPU3 165 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms