RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Gm8138F7BY56 213 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm8232F7CFJ3 213 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm17079F7D8Y4 213 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm8165L7N218 213 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm8122L7N2C7 213 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm17078M0QW51 211 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cd247P24161 164 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tacr2P30549 384 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Serpina3mQ03734 418 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ermp1Q3UVK0 898 aaKnown RBP12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Angptl7Q8R1Q3 337 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Q8R2K8 148 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Hspa14Q99M31 509 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Arpc5lQ9D898 153 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Exosc1Q9DAA6 195 aaKnown RBP12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Alyref2Q9JJW6 218 aa12.35□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr1253A2AUA2 318 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr1306A2BFL7 312 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm21319F6YNI8 144 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm21738J3QP72 227 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm17026K7N6Z0 213 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 JtbO88824 146 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cyp1a1P00184 524 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tuba1bP05213 451 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 CkmP07310 381 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cxcl9P18340 126 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 F2P19221 618 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ephb3P54754 993 aaKnown RBP12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tuba1aP68369 451 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 EpycP70186 322 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Spag8Q3V0Q6 470 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr1251Q7TQZ3 318 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Taldo1Q93092 337 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Dhrs4Q99LB2 279 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cadm3Q99N28 396 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Twist2Q9D030 160 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Zbp1Q9QY24 411 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Abhd1Q9QZC8 412 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ighg3A0A1Y7VJN6 399 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Vmn1r9A2RST7 299 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Vmn2r2L7N2E9 908 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cdk2ap1O35207 114 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 PfklP12382 780 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 MazP56671 477 aaKnown RBP12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ruvbl1P60122 456 aaKnown RBP12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 H2-Q2Q4KN81 360 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 AY358078Q6UY53 465 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Znf473Q8BI67 892 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 RybpQ8CCI5 228 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 HpgdQ8VCC1 269 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr1278Q8VF39 313 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr1208Q8VG47 308 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Scpep1Q920A5 452 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Elovl6Q920L5 267 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 IqchQ9D2K4 1071 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cldn7Q9Z261 211 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Vmn1r10W4VSP8 311 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Scn1aA2APX8 2009 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm10608E9PZ13 166 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm4847G3X946 537 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Wsb2O54929 404 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 P04213 122 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 AldocP05063 363 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Polr2lP62876 67 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Scgb1a1Q06318 96 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Fam98aQ3TJZ6 515 aaKnown RBP12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Prss53Q571E5 552 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Sqstm1Q64337 442 aaKnown RBP12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gpr142Q7TQN9 365 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Slitrk2Q810C0 846 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Bend5Q8C6D4 421 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cdc73Q8JZM7 531 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 ManbaQ8K2I4 879 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 FggQ8VCM7 436 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 EsamQ925F2 394 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 AmnQ99JB7 458 aaKnown RBP12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tmed9Q99KF1 235 aaKnown RBP12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cstf1Q99LC2 431 aaKnown RBP12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Spg21Q9CQC8 308 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gadd45gip1Q9CR59 222 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 PaicsQ9DCL9 425 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr630Q9EQQ7 319 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Fzd9Q9R216 592 aa12.34□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm37596A0A0A6YXL2 336 aa12.33□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ulk1O70405 1051 aa12.33□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Clcn7O70496 803 aa12.33□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Aff3P51827 1254 aa12.33□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Btbd1P58544 488 aa12.33□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Rps26P62855 115 aaKnown RBP12.33□□□□□ -0.43
Clcn3-201ENSMUST00000004430 MagixQ4KL35 324 aa12.33□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cntn4Q69Z26 1026 aa12.33□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tatdn1Q6P8M1 295 aa12.33□□□□□ -0.43
Clcn3-201ENSMUST00000004430 CipcQ8R0W1 432 aa12.33□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gbgt1Q8VI38 347 aa12.33□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Pdzk1Q9JIL4 519 aa12.33□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Adam24Q9R160 761 aa12.33□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Scgb2b17S4R2V3 82 aa12.33□□□□□ -0.43
Clcn3-201ENSMUST00000004430 A0A1Y7VIU7 259 aa12.33□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Spaca5A2AE20 160 aa12.33□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Arhgap40E9Q6X9 672 aa12.33□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms