RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Znf318Q99PP2 2237 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Gm10608E9PZ13 166 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Xkr6E9Q6C8 638 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Surf2P09926 257 aaKnown RBP15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Pcsk2P21661 637 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Rab23P35288 237 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Eef1a2P62631 463 aaKnown RBP15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 P2rx5Q3UYI1 455 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Nutm2Q3V0C3 733 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 OmpQ64288 163 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Ccdc142Q8CAI1 738 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Neto1Q8R4I7 533 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Dlg2Q91XM9 852 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Cwh43Q91YL7 699 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Zdhhc21Q9D270 265 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 PlgrktQ9D3P8 147 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Rhox2aQ9D4Y3 191 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Ndufv2Q9D6J6 248 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Izumo4D3Z690 227 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Olfr564E9PWA8 316 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Sult3a1O35403 293 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Hoxd4P10628 250 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Tstd2Q3U269 495 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Slc17a4Q5NCM1 492 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Crhr2Q60748 411 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Il18r1Q61098 537 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Egfl8Q6GUQ1 293 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Ptx4Q6RUU0 478 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Hfe2Q7TQ32 420 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Psmd11Q8BG32 422 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Lancl3Q8CD19 420 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Vmn1r201Q8R262 300 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Ttc4Q8R3H9 386 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 KptnQ8VCX6 430 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Ccdc71Q8VEG0 433 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 SharpinQ91WA6 380 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Camk1Q91YS8 374 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Kdelr2Q9CQM2 212 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Ttc9bQ9D6E4 239 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Timm50Q9D880 353 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Csnk1dQ9DC28 415 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 OtofQ9ESF1 1997 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Nlrp1bA1Z198 1177 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Ccnb1ip1D3Z3K2 276 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Zfp169E9Q3R6 731 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Glyatl3E9Q5L8 290 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Pax7P47239 503 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Scgb1a1Q06318 96 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Eef2kmtQ3UZW7 335 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Sel1l2Q3V172 688 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Map4k2Q61161 821 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 IpmkQ7TT16 396 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Cox14Q8BH51 57 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 C1qtnf12Q8R2Z0 308 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Gpr37l1Q99JG2 481 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 ArhgdiaQ99PT1 204 aaKnown RBP15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Plpp6Q9D4F2 292 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Adam24Q9R160 761 aa15.85■□□□□ 0.13
Shh-201ENSMUST00000002708 Gm13088A2AGW6 460 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Tnfrsf25B1AWN9 411 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Gm340F6RGI3 1242 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 AF366264G3X9P9 502 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Gm3159K7N760 267 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Cops4O88544 406 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Gpx5P21765 221 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Dnaja1P63037 397 aaKnown RBP15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 G6pdxQ00612 515 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Hyal4Q05A56 481 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Lingo4Q149C3 593 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Gm2aQ60648 193 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Sf1Q64213 653 aaKnown RBP15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Slc39a10Q6P5F6 833 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Cpeb2Q812E0 521 aaKnown RBP15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Prr11Q8BHE0 368 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Irak2Q8CFA1 622 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Prkd3Q8K1Y2 889 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Ahi1Q8K3E5 1047 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Il23rQ8K4B4 644 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Sirt4Q8R216 333 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Vmn1r185Q8R299 319 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Spg21Q9CQC8 308 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Gkn2Q9CQS6 184 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Mri1Q9CQT1 369 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Rnase10Q9D5A9 208 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Wwp2Q9DBH0 870 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Myo7aP97479 2215 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Vmn2r111K7N674 857 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Mtnd1P03888 318 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Slc25a51Q5HZI9 298 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Casd1Q7TN73 797 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Plekhs1Q8BW88 474 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 MmaaQ8C7H1 415 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Smco1Q8CEZ1 214 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Olfr342Q8VGK7 312 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Acsm1Q91VA0 573 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Tor1aQ9ER39 333 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Inpp5eQ9JII1 647 aa15.84■□□□□ 0.13
Shh-201ENSMUST00000002708 Col4a6B1AVK5 1691 aa15.83■□□□□ 0.13
Shh-201ENSMUST00000002708 Gm14459A2BI73 179 aa15.83■□□□□ 0.13
Shh-201ENSMUST00000002708 Cldn34b1B1AZQ8 209 aa15.83■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 78.9 ms