RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC4YER147C SAM2P19358 384 aaKnown RBP13.06□□□□□ -0.32
SCC4YER147C RAM2P29703 316 aa13.06□□□□□ -0.32
SCC4YER147C RGD1P38339 666 aa13.06□□□□□ -0.32
SCC4YER147C LSB1P53281 241 aa13.06□□□□□ -0.32
SCC4YER147C GDT1P38301 280 aaPredicted RBP13.06□□□□□ -0.32
SCC4YER147C BIM1P40013 344 aa13.06□□□□□ -0.32
SCC4YER147C VTC3Q02725 835 aa13.06□□□□□ -0.32
SCC4YER147C RUD3Q12234 484 aaKnown RBP13.06□□□□□ -0.32
SCC4YER147C CDC8P00572 216 aa13.05□□□□□ -0.32
SCC4YER147C ECM32P32644 1121 aaKnown RBP13.05□□□□□ -0.32
SCC4YER147C GUP1P53154 560 aa13.05□□□□□ -0.32
SCC4YER147C MFM1Q02783 413 aa13.05□□□□□ -0.32
SCC4YER147C DPL1Q05567 589 aa13.05□□□□□ -0.32
SCC4YER147C SUE1Q06524 206 aa13.05□□□□□ -0.32
SCC4YER147C GSC2P40989 1895 aa13.04□□□□□ -0.32
SCC4YER147C PWP2P25635 923 aaKnown RBP13.04□□□□□ -0.32
SCC4YER147C XRS2P33301 854 aa13.04□□□□□ -0.32
SCC4YER147C NUP82P40368 713 aa13.04□□□□□ -0.32
SCC4YER147C MAD1P40957 749 aa13.04□□□□□ -0.32
SCC4YER147C TAD1P53065 400 aa13.04□□□□□ -0.32
SCC4YER147C TCO89Q08921 799 aa13.04□□□□□ -0.32
SCC4YER147C KIN1P13185 1064 aa13.04□□□□□ -0.32
SCC4YER147C CST26P38226 397 aa13.04□□□□□ -0.32
SCC4YER147C YJL171CP46992 396 aa13.04□□□□□ -0.32
SCC4YER147C YPR078CQ06813 372 aa13.04□□□□□ -0.32
SCC4YER147C RAD53P22216 821 aa13.03□□□□□ -0.32
SCC4YER147C ICL1P28240 557 aaPredicted RBP13.03□□□□□ -0.32
SCC4YER147C ISW1P38144 1129 aa13.03□□□□□ -0.32
SCC4YER147C SET5P38890 526 aaKnown RBP13.03□□□□□ -0.32
SCC4YER147C YMR124WP39523 943 aaKnown RBP13.03□□□□□ -0.32
SCC4YER147C UBP5P39944 805 aa13.03□□□□□ -0.32
SCC4YER147C CWC22P53333 577 aaKnown RBP13.03□□□□□ -0.32
SCC4YER147C YMR114CQ04471 368 aaKnown RBP13.03□□□□□ -0.32
SCC4YER147C AFG2P32794 780 aa13.02□□□□□ -0.32
SCC4YER147C KIC1P38692 1080 aa13.02□□□□□ -0.32
SCC4YER147C SIP3P38717 1229 aa13.02□□□□□ -0.32
SCC4YER147C PAN5P38787 379 aa13.02□□□□□ -0.32
SCC4YER147C YMR102CQ03177 834 aa13.02□□□□□ -0.32
SCC4YER147C FUS2Q05670 677 aa13.02□□□□□ -0.32
SCC4YER147C SFH1Q06168 426 aa13.02□□□□□ -0.32
SCC4YER147C OXR1Q08952 273 aa13.02□□□□□ -0.32
SCC4YER147C ILV1P00927 576 aaKnown RBP13.02□□□□□ -0.33
SCC4YER147C RAD1P06777 1100 aa13.02□□□□□ -0.33
SCC4YER147C SMC1P32908 1225 aa13.02□□□□□ -0.33
SCC4YER147C NIP100P33420 868 aa13.02□□□□□ -0.33
SCC4YER147C PTC4P38089 393 aa13.02□□□□□ -0.33
SCC4YER147C SUL1P38359 859 aa13.02□□□□□ -0.33
SCC4YER147C PIH1P38768 344 aa13.02□□□□□ -0.33
SCC4YER147C BTN2P53286 410 aa13.02□□□□□ -0.33
SCC4YER147C PGA2P53903 129 aa13.02□□□□□ -0.33
SCC4YER147C SEC5P89102 971 aa13.02□□□□□ -0.33
SCC4YER147C VTI1Q04338 217 aa13.02□□□□□ -0.33
SCC4YER147C UTP4Q06679 776 aaKnown RBP13.02□□□□□ -0.33
SCC4YER147C GFA1P14742 717 aaKnown RBP13.01□□□□□ -0.33
SCC4YER147C PFK1P16861 987 aaKnown RBP13.01□□□□□ -0.33
SCC4YER147C ADP1P25371 1049 aa13.01□□□□□ -0.33
SCC4YER147C SLD2P34252 453 aa13.01□□□□□ -0.33
SCC4YER147C JNM1P36224 373 aa13.01□□□□□ -0.33
SCC4YER147C YBL028CP38202 106 aa13.01□□□□□ -0.33
SCC4YER147C TDA3P38758 523 aa13.01□□□□□ -0.33
SCC4YER147C YFL034WP43564 1073 aa13.01□□□□□ -0.33
SCC4YER147C SIL1Q08199 421 aa13.01□□□□□ -0.33
SCC4YER147C MMM1P41800 426 aa13□□□□□ -0.33
SCC4YER147C NBP1P52919 319 aaPredicted RBP13□□□□□ -0.33
SCC4YER147C TOF1P53840 1238 aa13□□□□□ -0.33
SCC4YER147C MLH2Q07980 695 aa13□□□□□ -0.33
SCC4YER147C TRK2P28584 889 aa12.99□□□□□ -0.33
SCC4YER147C SNU71P53207 620 aaKnown RBP12.99□□□□□ -0.33
SCC4YER147C YDL057WQ07379 328 aa12.99□□□□□ -0.33
SCC4YER147C YOR223WQ12015 292 aa12.99□□□□□ -0.33
SCC4YER147C MED1Q12321 566 aa12.99□□□□□ -0.33
SCC4YER147C YOL087CQ99247 1116 aa12.99□□□□□ -0.33
SCC4YER147C GCG1P32656 232 aaKnown RBP12.98□□□□□ -0.33
SCC4YER147C KTR2P33550 425 aa12.98□□□□□ -0.33
SCC4YER147C YJR079WP47126 109 aa12.98□□□□□ -0.33
SCC4YER147C OYE2Q03558 400 aaKnown RBP12.98□□□□□ -0.33
SCC4YER147C URH1Q04179 340 aa12.98□□□□□ -0.33
SCC4YER147C LAP2Q10740 671 aa12.98□□□□□ -0.33
SCC4YER147C SGM1P47166 707 aa12.97□□□□□ -0.33
SCC4YER147C AAD16Q02895 342 aa12.97□□□□□ -0.33
SCC4YER147C DAL7P21826 554 aa12.97□□□□□ -0.33
SCC4YER147C NDT80P38830 627 aa12.97□□□□□ -0.33
SCC4YER147C FMS1P50264 508 aa12.97□□□□□ -0.33
SCC4YER147C STE23Q06010 1027 aa12.97□□□□□ -0.33
SCC4YER147C ERG11P10614 530 aa12.96□□□□□ -0.33
SCC4YER147C MRF1P30775 413 aaPredicted RBP12.96□□□□□ -0.33
SCC4YER147C SDS3P40505 327 aa12.96□□□□□ -0.33
SCC4YER147C KAP114P53067 1004 aa12.96□□□□□ -0.33
SCC4YER147C MTC3P53077 123 aa12.96□□□□□ -0.33
SCC4YER147C KIN4Q01919 800 aa12.96□□□□□ -0.33
SCC4YER147C GIR2Q03768 265 aaPredicted RBP12.96□□□□□ -0.33
SCC4YER147C TSR1Q07381 788 aaKnown RBP12.96□□□□□ -0.33
SCC4YER147C FAL1Q12099 399 aaKnown RBP12.96□□□□□ -0.33
SCC4YER147C PMA1P05030 918 aaKnown RBP12.95□□□□□ -0.34
SCC4YER147C SCP160P06105 1222 aaKnown RBP RIP-Chip data12.95□□□□□ -0.34not detected
SCC4YER147C CTT1P06115 562 aa12.95□□□□□ -0.34
SCC4YER147C LAS1P36146 502 aaPredicted RBP12.95□□□□□ -0.34
SCC4YER147C OLA1P38219 394 aaKnown RBP12.95□□□□□ -0.34
SCC4YER147C BRE2P43132 505 aa12.95□□□□□ -0.34
SCC4YER147C EAF6P47128 113 aa12.95□□□□□ -0.34
Retrieved 100 of 5,963 RNA–protein pairs in 61.6 ms