RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 PTGS1P23219 599 aa18.78■□□□□ 0.6
LINC02228-204ENST00000642115 MCM2P49736 904 aa18.78■□□□□ 0.6
LINC02228-204ENST00000642115 SYCP1Q15431 976 aa18.78■□□□□ 0.6
LINC02228-204ENST00000642115 PTPRCP08575 1304 aa18.78■□□□□ 0.6
LINC02228-204ENST00000642115 REREQ9P2R6 1566 aa18.78■□□□□ 0.6
LINC02228-204ENST00000642115 AEBP2Q6ZN18 517 aaPredicted RBP18.78■□□□□ 0.6
LINC02228-204ENST00000642115 DDX54Q8TDD1 881 aaKnown RBP18.78■□□□□ 0.6
LINC02228-204ENST00000642115 TRERF1Q96PN7 1200 aa18.78■□□□□ 0.6
LINC02228-204ENST00000642115 SIGLEC1Q9BZZ2 1709 aa18.77■□□□□ 0.6
LINC02228-204ENST00000642115 CPA1P15085 419 aa18.77■□□□□ 0.6
LINC02228-204ENST00000642115 STK31Q9BXU1 1019 aa18.77■□□□□ 0.6
LINC02228-204ENST00000642115 SRCIN1Q9C0H9 1055 aa18.77■□□□□ 0.6
LINC02228-204ENST00000642115 SLC20A2Q08357 652 aa18.77■□□□□ 0.59
LINC02228-204ENST00000642115 RGS12O14924 1447 aa18.77■□□□□ 0.59
LINC02228-204ENST00000642115 ARHGEF40Q8TER5 1519 aa18.76■□□□□ 0.59
LINC02228-204ENST00000642115 MAP2P11137 1827 aaKnown RBP18.76■□□□□ 0.59
LINC02228-204ENST00000642115 SMTNL1A8MU46 457 aa18.76■□□□□ 0.59
LINC02228-204ENST00000642115 KRT222Q8N1A0 295 aa18.76■□□□□ 0.59
LINC02228-204ENST00000642115 TPM3P06753 285 aa18.76■□□□□ 0.59
LINC02228-204ENST00000642115 LRRFIP2Q9Y608 721 aaKnown RBP18.76■□□□□ 0.59
LINC02228-204ENST00000642115 KIF24Q5T7B8 1368 aa18.76■□□□□ 0.59
LINC02228-204ENST00000642115 FUCA2Q9BTY2 467 aa18.75■□□□□ 0.59
LINC02228-204ENST00000642115 WDR33Q9C0J8 1336 aaKnown RBP18.75■□□□□ 0.59
LINC02228-204ENST00000642115 TULP2O00295 520 aa18.75■□□□□ 0.59
LINC02228-204ENST00000642115 LRMPQ12912 555 aa18.75■□□□□ 0.59
LINC02228-204ENST00000642115 ST7Q9NRC1 585 aa18.75■□□□□ 0.59
LINC02228-204ENST00000642115 CCDC61Q9Y6R9 512 aa18.75■□□□□ 0.59
LINC02228-204ENST00000642115 TNNT1P13805 278 aa18.75■□□□□ 0.59
LINC02228-204ENST00000642115 CCT4P50991 539 aaKnown RBP18.75■□□□□ 0.59
LINC02228-204ENST00000642115 CERS3Q8IU89 383 aa18.75■□□□□ 0.59
LINC02228-204ENST00000642115 HECW2Q9P2P5 1572 aa18.74■□□□□ 0.59
LINC02228-204ENST00000642115 INTS4Q96HW7 963 aaKnown RBP18.74■□□□□ 0.59
LINC02228-204ENST00000642115 PIK3C2BO00750 1634 aa18.74■□□□□ 0.59
LINC02228-204ENST00000642115 MLH3Q9UHC1 1453 aa18.73■□□□□ 0.59
LINC02228-204ENST00000642115 GOLGA6L6A8MZA4 724 aa18.73■□□□□ 0.59
LINC02228-204ENST00000642115 TRIM34Q9BYJ4 488 aa18.73■□□□□ 0.59
LINC02228-204ENST00000642115 OSBPL3Q9H4L5 887 aa18.73■□□□□ 0.59
LINC02228-204ENST00000642115 KMT5BQ4FZB7 885 aa18.73■□□□□ 0.59
LINC02228-204ENST00000642115 CALCOCO1Q9P1Z2 691 aa18.73■□□□□ 0.59
LINC02228-204ENST00000642115 CCDC112Q8NEF3 446 aa18.72■□□□□ 0.59
LINC02228-204ENST00000642115 SPG7Q9UQ90 795 aa18.72■□□□□ 0.59
LINC02228-204ENST00000642115 TCHHQ07283 1943 aa18.72■□□□□ 0.59
LINC02228-204ENST00000642115 SURF6O75683 361 aaKnown RBP18.72■□□□□ 0.59
LINC02228-204ENST00000642115 MTHFSDQ2M296 383 aaKnown RBP18.72■□□□□ 0.59
LINC02228-204ENST00000642115 CCDC186Q7Z3E2 898 aa18.72■□□□□ 0.59
LINC02228-204ENST00000642115 TMEM87AQ8NBN3 555 aa18.72■□□□□ 0.59
LINC02228-204ENST00000642115 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.71■□□□□ 0.59
LINC02228-204ENST00000642115 V9GYY5 206 aaPredicted RBP18.71■□□□□ 0.59
LINC02228-204ENST00000642115 FLIIQ13045 1269 aa18.71■□□□□ 0.59
LINC02228-204ENST00000642115 CWC27Q6UX04 472 aaKnown RBP18.71■□□□□ 0.59
LINC02228-204ENST00000642115 NRBP1Q9UHY1 535 aa18.7■□□□□ 0.58
LINC02228-204ENST00000642115 SMC3Q9UQE7 1217 aa18.7■□□□□ 0.58
LINC02228-204ENST00000642115 EDC4Q6P2E9 1401 aaKnown RBP18.7■□□□□ 0.58
LINC02228-204ENST00000642115 UBE2HP62256 183 aa18.7■□□□□ 0.58
LINC02228-204ENST00000642115 YEATS2Q9ULM3 1422 aa18.7■□□□□ 0.58
LINC02228-204ENST00000642115 VPS37CA5D8V6 355 aaPredicted RBP18.69■□□□□ 0.58
LINC02228-204ENST00000642115 FAM69CQ0P6D2 419 aa18.69■□□□□ 0.58
LINC02228-204ENST00000642115 ZNF592Q92610 1267 aa18.69■□□□□ 0.58
LINC02228-204ENST00000642115 SYT1P21579 422 aa18.69■□□□□ 0.58
LINC02228-204ENST00000642115 RPAP1Q9BWH6 1393 aaPredicted RBP18.69■□□□□ 0.58
LINC02228-204ENST00000642115 GNAI3P08754 354 aa18.69■□□□□ 0.58
LINC02228-204ENST00000642115 AK2P54819 239 aa18.69■□□□□ 0.58
LINC02228-204ENST00000642115 ANAPC15P60006 121 aa18.69■□□□□ 0.58
LINC02228-204ENST00000642115 RBM6P78332 1123 aaKnown RBP18.69■□□□□ 0.58
LINC02228-204ENST00000642115 CCDC83Q8IWF9 413 aa18.69■□□□□ 0.58
LINC02228-204ENST00000642115 RASEFQ8IZ41 740 aa18.69■□□□□ 0.58
LINC02228-204ENST00000642115 STX6O43752 255 aa18.68■□□□□ 0.58
LINC02228-204ENST00000642115 ATP8B2P98198 1209 aa18.68■□□□□ 0.58
LINC02228-204ENST00000642115 ZNF397Q8NF99 534 aaPredicted RBP18.68■□□□□ 0.58
LINC02228-204ENST00000642115 PAXBP1Q9Y5B6 917 aa18.68■□□□□ 0.58
LINC02228-204ENST00000642115 CDK12Q9NYV4 1490 aaPredicted RBP18.68■□□□□ 0.58
LINC02228-204ENST00000642115 ZSCAN22P10073 491 aaPredicted RBP18.68■□□□□ 0.58
LINC02228-204ENST00000642115 FAM53CQ9NYF3 392 aa18.68■□□□□ 0.58
LINC02228-204ENST00000642115 CDC42BPGQ6DT37 1551 aa18.68■□□□□ 0.58
LINC02228-204ENST00000642115 UBTFL1P0CB47 393 aaPredicted RBP18.67■□□□□ 0.58
LINC02228-204ENST00000642115 DNM1Q05193 864 aaKnown RBP18.67■□□□□ 0.58
LINC02228-204ENST00000642115 ALKQ9UM73 1620 aa18.67■□□□□ 0.58
LINC02228-204ENST00000642115 LTV1Q96GA3 475 aaPredicted RBP18.67■□□□□ 0.58
LINC02228-204ENST00000642115 MYO5BQ9ULV0 1848 aa18.67■□□□□ 0.58
LINC02228-204ENST00000642115 CPS1P31327 1500 aa18.67■□□□□ 0.58
LINC02228-204ENST00000642115 ANKRD26Q9UPS8 1709 aa18.67■□□□□ 0.58
LINC02228-204ENST00000642115 CASTP20810 708 aaKnown RBP18.66■□□□□ 0.58
LINC02228-204ENST00000642115 HNRNPH2P55795 449 aaKnown RBP18.66■□□□□ 0.58
LINC02228-204ENST00000642115 CAMK4Q16566 473 aa18.66■□□□□ 0.58
LINC02228-204ENST00000642115 FERMT3Q86UX7 667 aa18.66■□□□□ 0.58
LINC02228-204ENST00000642115 ZNF215Q9UL58 517 aaPredicted RBP18.66■□□□□ 0.58
LINC02228-204ENST00000642115 EIF2S2P20042 333 aaKnown RBP18.66■□□□□ 0.58
LINC02228-204ENST00000642115 OS9Q13438 667 aaPredicted RBP18.66■□□□□ 0.58
LINC02228-204ENST00000642115 TPD52L1Q16890 204 aaPredicted RBP18.66■□□□□ 0.58
LINC02228-204ENST00000642115 FBXO38Q6PIJ6 1188 aa18.66■□□□□ 0.58
LINC02228-204ENST00000642115 KIF20BQ96Q89 1820 aa18.66■□□□□ 0.58
LINC02228-204ENST00000642115 CPSF1Q10570 1443 aaKnown RBP18.66■□□□□ 0.58
LINC02228-204ENST00000642115 MAP3K19Q56UN5 1328 aa18.66■□□□□ 0.58
LINC02228-204ENST00000642115 DRC7Q8IY82 874 aa18.66■□□□□ 0.58
LINC02228-204ENST00000642115 SNX14Q9Y5W7 946 aa18.66■□□□□ 0.58
LINC02228-204ENST00000642115 LARGE1O95461 756 aa18.65■□□□□ 0.58
LINC02228-204ENST00000642115 AATKQ6ZMQ8 1374 aa18.65■□□□□ 0.58
LINC02228-204ENST00000642115 KIAA0232Q92628 1395 aa18.65■□□□□ 0.58
LINC02228-204ENST00000642115 ATP7BP35670 1465 aa18.65■□□□□ 0.58
LINC02228-204ENST00000642115 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms