RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 EN1Q05925 392 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-220ENST00000641570 KIF6Q6ZMV9 814 aa16.53■□□□□ 0.24
PHGDH-220ENST00000641570 BCL2L13Q9BXK5 485 aa16.53■□□□□ 0.24
PHGDH-220ENST00000641570 CCDC87Q9NVE4 849 aa16.53■□□□□ 0.24
PHGDH-220ENST00000641570 SBF2Q86WG5 1849 aa16.52■□□□□ 0.24
PHGDH-220ENST00000641570 TCERG1O14776 1098 aaKnown RBP16.52■□□□□ 0.24
PHGDH-220ENST00000641570 SLC4A2P04920 1241 aa16.52■□□□□ 0.24
PHGDH-220ENST00000641570 NBPF14Q5TI25 921 aa16.52■□□□□ 0.24
PHGDH-220ENST00000641570 FRAT1Q92837 279 aaPredicted RBP16.52■□□□□ 0.24
PHGDH-220ENST00000641570 CHPF2Q9P2E5 772 aa16.52■□□□□ 0.24
PHGDH-220ENST00000641570 USP16Q9Y5T5 823 aa16.52■□□□□ 0.24
PHGDH-220ENST00000641570 A0A087WZG4 1122 aa16.51■□□□□ 0.23
PHGDH-220ENST00000641570 PRAMEF22A3QJZ6 481 aa16.51■□□□□ 0.23
PHGDH-220ENST00000641570 GNPATO15228 680 aa16.51■□□□□ 0.23
PHGDH-220ENST00000641570 MS4A1P11836 297 aa16.51■□□□□ 0.23
PHGDH-220ENST00000641570 CRKLP46109 303 aaKnown RBP16.51■□□□□ 0.23
PHGDH-220ENST00000641570 RARSP54136 660 aaKnown RBP16.51■□□□□ 0.23
PHGDH-220ENST00000641570 FTSJ3Q8IY81 847 aaKnown RBP16.51■□□□□ 0.23
PHGDH-220ENST00000641570 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
PHGDH-220ENST00000641570 STK32BQ9NY57 414 aa16.51■□□□□ 0.23
PHGDH-220ENST00000641570 RTCBQ9Y3I0 505 aaKnown RBP16.51■□□□□ 0.23
PHGDH-220ENST00000641570 CNTNAP4Q9C0A0 1308 aa16.5■□□□□ 0.23
PHGDH-220ENST00000641570 CYP19A1P11511 503 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-220ENST00000641570 FKBP5Q13451 457 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-220ENST00000641570 SSH1Q8WYL5 1049 aa16.5■□□□□ 0.23
PHGDH-220ENST00000641570 TFCP2L1Q9NZI6 479 aa16.5■□□□□ 0.23
PHGDH-220ENST00000641570 UBR2Q8IWV8 1755 aa16.5■□□□□ 0.23
PHGDH-220ENST00000641570 MSH5O43196 834 aa16.49■□□□□ 0.23
PHGDH-220ENST00000641570 NEFLP07196 543 aa16.49■□□□□ 0.23
PHGDH-220ENST00000641570 KCNQ4P56696 695 aa16.49■□□□□ 0.23
PHGDH-220ENST00000641570 AIMP1Q12904 312 aaKnown RBP16.49■□□□□ 0.23
PHGDH-220ENST00000641570 ITPK1Q13572 414 aa16.49■□□□□ 0.23
PHGDH-220ENST00000641570 EZH2Q15910 746 aaKnown RBP16.49■□□□□ 0.23
PHGDH-220ENST00000641570 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
PHGDH-220ENST00000641570 A1BGP04217 495 aa16.48■□□□□ 0.23
PHGDH-220ENST00000641570 IL6STP40189 918 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-220ENST00000641570 RC3H1Q5TC82 1133 aaKnown RBP16.48■□□□□ 0.23
PHGDH-220ENST00000641570 DEFB132Q7Z7B7 95 aa16.48■□□□□ 0.23
PHGDH-220ENST00000641570 UPF1Q92900 1129 aaKnown RBP eCLIP16.48■□□□□ 0.23
PHGDH-220ENST00000641570 API5Q9BZZ5 524 aaKnown RBP16.48■□□□□ 0.23
PHGDH-220ENST00000641570 ZBTB1Q9Y2K1 713 aa16.48■□□□□ 0.23
PHGDH-220ENST00000641570 PTPRCP08575 1304 aa16.47■□□□□ 0.23
PHGDH-220ENST00000641570 LAMB4A4D0S4 1761 aa16.47■□□□□ 0.23
PHGDH-220ENST00000641570 PHF14O94880 888 aa16.47■□□□□ 0.23
PHGDH-220ENST00000641570 ZKSCAN2Q63HK3 967 aa16.47■□□□□ 0.23
PHGDH-220ENST00000641570 FLAD1Q8NFF5 587 aa16.47■□□□□ 0.23
PHGDH-220ENST00000641570 SLC4A9Q96Q91 983 aa16.47■□□□□ 0.23
PHGDH-220ENST00000641570 TNS1Q9HBL0 1735 aaKnown RBP16.47■□□□□ 0.23
PHGDH-220ENST00000641570 ZPR1O75312 459 aa16.46■□□□□ 0.23
PHGDH-220ENST00000641570 PIP4K2AP48426 406 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-220ENST00000641570 NEXNQ0ZGT2 675 aa16.46■□□□□ 0.23
PHGDH-220ENST00000641570 FLIIQ13045 1269 aa16.46■□□□□ 0.23
PHGDH-220ENST00000641570 RIC3Q7Z5B4 369 aa16.46■□□□□ 0.23
PHGDH-220ENST00000641570 MRPL50Q8N5N7 158 aaKnown RBP16.46■□□□□ 0.23
PHGDH-220ENST00000641570 CAMKK2Q96RR4 588 aa16.46■□□□□ 0.23
PHGDH-220ENST00000641570 ZNF652Q9Y2D9 606 aa16.46■□□□□ 0.23
PHGDH-220ENST00000641570 BCAR3O75815 825 aa16.45■□□□□ 0.22
PHGDH-220ENST00000641570 ANXA1P04083 346 aa16.45■□□□□ 0.22
PHGDH-220ENST00000641570 ADRA2BP18089 450 aa16.45■□□□□ 0.22
PHGDH-220ENST00000641570 RFC4P35249 363 aa16.45■□□□□ 0.22
PHGDH-220ENST00000641570 TRAPPC3LQ5T215 181 aa16.45■□□□□ 0.22
PHGDH-220ENST00000641570 XAGE3Q8WTP9 111 aa16.45■□□□□ 0.22
PHGDH-220ENST00000641570 NOB1Q9ULX3 412 aaKnown RBP16.45■□□□□ 0.22
PHGDH-220ENST00000641570 RGPD3A6NKT7 1758 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-220ENST00000641570 RGPD4Q7Z3J3 1758 aa16.44■□□□□ 0.22
PHGDH-220ENST00000641570 C5P01031 1676 aa16.44■□□□□ 0.22
PHGDH-220ENST00000641570 COL15A1P39059 1388 aa16.44■□□□□ 0.22
PHGDH-220ENST00000641570 RPS6KA4O75676 772 aa16.44■□□□□ 0.22
PHGDH-220ENST00000641570 DZIP3Q86Y13 1208 aaKnown RBP16.44■□□□□ 0.22
PHGDH-220ENST00000641570 LRRC4BQ9NT99 713 aa16.44■□□□□ 0.22
PHGDH-220ENST00000641570 ZNF831Q5JPB2 1677 aa16.43■□□□□ 0.22
PHGDH-220ENST00000641570 LY75O60449 1722 aa16.43■□□□□ 0.22
PHGDH-220ENST00000641570 SSFA2P28290 1259 aa16.43■□□□□ 0.22
PHGDH-220ENST00000641570 COPS6Q7L5N1 327 aa16.43■□□□□ 0.22
PHGDH-220ENST00000641570 TJP1Q07157 1748 aa16.42■□□□□ 0.22
PHGDH-220ENST00000641570 RRP1P56182 461 aaKnown RBP16.42■□□□□ 0.22
PHGDH-220ENST00000641570 PROSER3Q2NL68 480 aa16.42■□□□□ 0.22
PHGDH-220ENST00000641570 HSP90AB3PQ58FF7 597 aa16.42■□□□□ 0.22
PHGDH-220ENST00000641570 INTS5Q6P9B9 1019 aaKnown RBP16.42■□□□□ 0.22
PHGDH-220ENST00000641570 SLC4A10Q6U841 1118 aa16.42■□□□□ 0.22
PHGDH-220ENST00000641570 SUPT16HQ9Y5B9 1047 aaKnown RBP16.42■□□□□ 0.22
PHGDH-220ENST00000641570 EP400Q96L91 3159 aa16.42■□□□□ 0.22
PHGDH-220ENST00000641570 NPHP1O15259 732 aa16.41■□□□□ 0.22
PHGDH-220ENST00000641570 BRPF1P55201 1214 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-220ENST00000641570 ATF7IPQ6VMQ6 1270 aa16.41■□□□□ 0.22
PHGDH-220ENST00000641570 ANKRD13DQ6ZTN6 518 aa16.41■□□□□ 0.22
PHGDH-220ENST00000641570 ARHGAP45Q92619 1136 aa16.41■□□□□ 0.22
PHGDH-220ENST00000641570 ZBTB3Q9H5J0 574 aa16.41■□□□□ 0.22
PHGDH-220ENST00000641570 PHAXQ9H814 394 aaKnown RBP16.41■□□□□ 0.22
PHGDH-220ENST00000641570 C4BP0C0L5 1744 aa16.41■□□□□ 0.22
PHGDH-220ENST00000641570 CICQ96RK0 1608 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-220ENST00000641570 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.4■□□□□ 0.22
PHGDH-220ENST00000641570 NBPF26B4DH59 902 aa16.4■□□□□ 0.22
PHGDH-220ENST00000641570 NBPF10Q6P3W6 841 aaKnown RBP16.4■□□□□ 0.22
PHGDH-220ENST00000641570 DZIP1LQ8IYY4 767 aaKnown RBP16.4■□□□□ 0.22
PHGDH-220ENST00000641570 NBPF15Q8N660 670 aa16.4■□□□□ 0.22
PHGDH-220ENST00000641570 PLBD2Q8NHP8 589 aa16.4■□□□□ 0.22
PHGDH-220ENST00000641570 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
PHGDH-220ENST00000641570 EIF5P55010 431 aaKnown RBP16.39■□□□□ 0.21
PHGDH-220ENST00000641570 PDIA6Q15084 440 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms