RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 KRT24Q2M2I5 525 aa9.68□□□□□ -0.86
RTTN-223ENST00000640931 OTUD6BQ8N6M0 293 aa9.68□□□□□ -0.86
RTTN-223ENST00000640931 PRIMPOLQ96LW4 560 aa9.68□□□□□ -0.86
RTTN-223ENST00000640931 ORAI2Q96SN7 254 aa9.68□□□□□ -0.86
RTTN-223ENST00000640931 FEZ2Q9UHY8 353 aaPredicted RBP9.68□□□□□ -0.86
RTTN-223ENST00000640931 NLRP6P59044 892 aa9.68□□□□□ -0.86
RTTN-223ENST00000640931 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.68□□□□□ -0.86
RTTN-223ENST00000640931 CDK12Q9NYV4 1490 aaPredicted RBP9.68□□□□□ -0.86
RTTN-223ENST00000640931 DDX11L8A8MPP1 907 aa9.67□□□□□ -0.86
RTTN-223ENST00000640931 NOP2P46087 812 aaKnown RBP9.67□□□□□ -0.86
RTTN-223ENST00000640931 ZKSCAN8Q15776 578 aaPredicted RBP9.67□□□□□ -0.86
RTTN-223ENST00000640931 ESCO1Q5FWF5 840 aa9.67□□□□□ -0.86
RTTN-223ENST00000640931 NBPF6Q5VWK0 638 aa9.67□□□□□ -0.86
RTTN-223ENST00000640931 MCM10Q7L590 875 aa9.67□□□□□ -0.86
RTTN-223ENST00000640931 NBPF5PQ86XG9 351 aaPredicted RBP9.67□□□□□ -0.86
RTTN-223ENST00000640931 ZNF710Q8N1W2 664 aa9.67□□□□□ -0.86
RTTN-223ENST00000640931 USHBP1Q8N6Y0 703 aa9.67□□□□□ -0.86
RTTN-223ENST00000640931 RNF217Q8TC41 542 aa9.67□□□□□ -0.86
RTTN-223ENST00000640931 DDX17Q92841 729 aaKnown RBP9.67□□□□□ -0.86
RTTN-223ENST00000640931 NBPF4Q96M43 638 aa9.67□□□□□ -0.86
RTTN-223ENST00000640931 DONSONQ9NYP3 566 aa9.67□□□□□ -0.86
RTTN-223ENST00000640931 MIS18AQ9NYP9 233 aa9.67□□□□□ -0.86
RTTN-223ENST00000640931 RBM25P49756 843 aaKnown RBP9.67□□□□□ -0.86
RTTN-223ENST00000640931 CASC1Q6TDU7 716 aa9.67□□□□□ -0.86
RTTN-223ENST00000640931 GZF1Q9H116 711 aaPredicted RBP9.67□□□□□ -0.86
RTTN-223ENST00000640931 OGFRQ9NZT2 677 aa9.67□□□□□ -0.86
RTTN-223ENST00000640931 NOB1Q9ULX3 412 aaKnown RBP9.67□□□□□ -0.86
RTTN-223ENST00000640931 PCDHB15Q9Y5E8 787 aa9.67□□□□□ -0.86
RTTN-223ENST00000640931 NALCNQ8IZF0 1738 aa9.66□□□□□ -0.86
RTTN-223ENST00000640931 STRCQ7RTU9 1775 aa9.66□□□□□ -0.86
RTTN-223ENST00000640931 RAD50Q92878 1312 aa9.66□□□□□ -0.86
RTTN-223ENST00000640931 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.66□□□□□ -0.86
RTTN-223ENST00000640931 ABTB2Q8N961 1025 aa9.66□□□□□ -0.86
RTTN-223ENST00000640931 NPHP4O75161 1426 aaPredicted RBP9.65□□□□□ -0.86
RTTN-223ENST00000640931 PIK3C2AO00443 1686 aa9.65□□□□□ -0.86
RTTN-223ENST00000640931 UBAP1LF5GYI3 381 aa9.65□□□□□ -0.86
RTTN-223ENST00000640931 SLFN14P0C7P3 912 aa9.65□□□□□ -0.86
RTTN-223ENST00000640931 C8orf58Q8NAV2 365 aa9.65□□□□□ -0.86
RTTN-223ENST00000640931 MNS1Q8NEH6 495 aa9.65□□□□□ -0.86
RTTN-223ENST00000640931 MBIPQ9NS73 344 aa9.65□□□□□ -0.86
RTTN-223ENST00000640931 AMPHP49418 695 aa9.65□□□□□ -0.87
RTTN-223ENST00000640931 C8orf34Q49A92 452 aa9.65□□□□□ -0.87
RTTN-223ENST00000640931 ICE2Q659A1 982 aa9.65□□□□□ -0.87
RTTN-223ENST00000640931 PHF8Q9UPP1 1060 aa9.65□□□□□ -0.87
RTTN-223ENST00000640931 USP31Q70CQ4 1352 aa9.65□□□□□ -0.87
RTTN-223ENST00000640931 TRIM27P14373 513 aa9.64□□□□□ -0.87
RTTN-223ENST00000640931 CALRP27797 417 aaKnown RBP9.64□□□□□ -0.87
RTTN-223ENST00000640931 PDCL2Q8N4E4 241 aa9.64□□□□□ -0.87
RTTN-223ENST00000640931 EYA1Q99502 592 aa9.64□□□□□ -0.87
RTTN-223ENST00000640931 UPF2Q9HAU5 1272 aaKnown RBP9.64□□□□□ -0.87
RTTN-223ENST00000640931 FMN2Q9NZ56 1722 aa9.64□□□□□ -0.87
RTTN-223ENST00000640931 CHD2O14647 1828 aaKnown RBP9.64□□□□□ -0.87
RTTN-223ENST00000640931 ATXN8OSP0DMR3 200 aa9.63□□□□□ -0.87
RTTN-223ENST00000640931 GUCY2CP25092 1073 aa9.63□□□□□ -0.87
RTTN-223ENST00000640931 MPNDQ8N594 471 aa9.63□□□□□ -0.87
RTTN-223ENST00000640931 ZKSCAN5Q9Y2L8 839 aa9.63□□□□□ -0.87
RTTN-223ENST00000640931 IBTKQ9P2D0 1353 aaPredicted RBP9.63□□□□□ -0.87
RTTN-223ENST00000640931 SPDYE2BA6NHP3 402 aa9.63□□□□□ -0.87
RTTN-223ENST00000640931 ZNF853P0CG23 659 aa9.63□□□□□ -0.87
RTTN-223ENST00000640931 SPDYE6P0CI01 402 aa9.63□□□□□ -0.87
RTTN-223ENST00000640931 PDE3AQ14432 1141 aa9.63□□□□□ -0.87
RTTN-223ENST00000640931 MTHFSDQ2M296 383 aaKnown RBP9.63□□□□□ -0.87
RTTN-223ENST00000640931 SPDYE2Q495Y8 402 aa9.63□□□□□ -0.87
RTTN-223ENST00000640931 LMOD2Q6P5Q4 547 aa9.63□□□□□ -0.87
RTTN-223ENST00000640931 ZNF526Q8TF50 670 aaPredicted RBP9.63□□□□□ -0.87
RTTN-223ENST00000640931 ZNF142P52746 1687 aaPredicted RBP9.63□□□□□ -0.87
RTTN-223ENST00000640931 DHX16O60231 1041 aaKnown RBP9.62□□□□□ -0.87
RTTN-223ENST00000640931 VAMP4O75379 141 aa9.62□□□□□ -0.87
RTTN-223ENST00000640931 PROSER2Q86WR7 435 aaPredicted RBP9.62□□□□□ -0.87
RTTN-223ENST00000640931 TMEM57Q8N5G2 664 aa9.62□□□□□ -0.87
RTTN-223ENST00000640931 SGSM3Q96HU1 749 aa9.62□□□□□ -0.87
RTTN-223ENST00000640931 DLG5Q8TDM6 1919 aa9.62□□□□□ -0.87
RTTN-223ENST00000640931 TTC21AQ8NDW8 1320 aa9.62□□□□□ -0.87
RTTN-223ENST00000640931 MARF1Q9Y4F3 1742 aaKnown RBP9.62□□□□□ -0.87
RTTN-223ENST00000640931 HOXC9P31274 260 aa9.62□□□□□ -0.87
RTTN-223ENST00000640931 NASPP49321 788 aaPredicted RBP9.62□□□□□ -0.87
RTTN-223ENST00000640931 SKOR2Q2VWA4 1001 aaPredicted RBP9.62□□□□□ -0.87
RTTN-223ENST00000640931 ZKSCAN2Q63HK3 967 aa9.62□□□□□ -0.87
RTTN-223ENST00000640931 CENPQQ7L2Z9 268 aaPredicted RBP9.62□□□□□ -0.87
RTTN-223ENST00000640931 MED4Q9NPJ6 270 aa9.62□□□□□ -0.87
RTTN-223ENST00000640931 IL16Q14005 1332 aa9.61□□□□□ -0.87
RTTN-223ENST00000640931 HSP90AB1P08238 724 aaKnown RBP9.61□□□□□ -0.87
RTTN-223ENST00000640931 TDO2P48775 406 aa9.61□□□□□ -0.87
RTTN-223ENST00000640931 PSME1Q06323 249 aa9.61□□□□□ -0.87
RTTN-223ENST00000640931 DZIP1LQ8IYY4 767 aaKnown RBP9.61□□□□□ -0.87
RTTN-223ENST00000640931 PIK3R4Q99570 1358 aa9.61□□□□□ -0.87
RTTN-223ENST00000640931 ITPRIPQ8IWB1 547 aa9.6□□□□□ -0.87
RTTN-223ENST00000640931 LRRC59Q96AG4 307 aaKnown RBP9.6□□□□□ -0.87
RTTN-223ENST00000640931 SLKQ9H2G2 1235 aaPredicted RBP9.6□□□□□ -0.87
RTTN-223ENST00000640931 C1orf115Q9H7X2 142 aa9.6□□□□□ -0.87
RTTN-223ENST00000640931 RSPH14Q9UHP6 348 aa9.6□□□□□ -0.87
RTTN-223ENST00000640931 ANKARQ7Z5J8 1434 aa9.6□□□□□ -0.87
RTTN-223ENST00000640931 SPDYE4A6NLX3 237 aa9.6□□□□□ -0.87
RTTN-223ENST00000640931 MVPQ14764 893 aaKnown RBP9.6□□□□□ -0.87
RTTN-223ENST00000640931 TERF2Q15554 542 aa9.6□□□□□ -0.87
RTTN-223ENST00000640931 MRPL50Q8N5N7 158 aaKnown RBP9.6□□□□□ -0.87
RTTN-223ENST00000640931 RASSF4Q9H2L5 321 aa9.6□□□□□ -0.87
RTTN-223ENST00000640931 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.6□□□□□ -0.87
RTTN-223ENST00000640931 SBNO1A3KN83 1393 aa9.59□□□□□ -0.87
RTTN-223ENST00000640931 ADGRL3Q9HAR2 1447 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms