RNA–Protein interactions for RNA: ENST00000640688.1

GABRD-216, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 3

Gene GABRD, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-216ENST00000640688 ZPR1O75312 459 aa26.67■■□□□ 1.86
GABRD-216ENST00000640688 PIM2Q9P1W9 311 aa26.67■■□□□ 1.86
GABRD-216ENST00000640688 COL15A1P39059 1388 aa26.66■■□□□ 1.86
GABRD-216ENST00000640688 BCL2L12Q9HB09 334 aa26.65■■□□□ 1.86
GABRD-216ENST00000640688 U2SURPO15042 1029 aaKnown RBP26.64■■□□□ 1.86
GABRD-216ENST00000640688 NFIXQ14938 502 aa26.64■■□□□ 1.86
GABRD-216ENST00000640688 NARFQ9UHQ1 456 aa26.64■■□□□ 1.86
GABRD-216ENST00000640688 NPC1L1Q9UHC9 1359 aa26.63■■□□□ 1.85
GABRD-216ENST00000640688 DALRD3Q5D0E6 543 aaKnown RBP26.63■■□□□ 1.85
GABRD-216ENST00000640688 C9orf131Q5VYM1 1079 aa26.63■■□□□ 1.85
GABRD-216ENST00000640688 NMRK2Q9NPI5 230 aa26.63■■□□□ 1.85
GABRD-216ENST00000640688 VSIG10Q8N0Z9 540 aa26.62■■□□□ 1.85
GABRD-216ENST00000640688 IL17REQ8NFR9 667 aa26.62■■□□□ 1.85
GABRD-216ENST00000640688 NRXN2Q9P2S2 1712 aa26.62■■□□□ 1.85
GABRD-216ENST00000640688 SIPA1L3O60292 1781 aaPredicted RBP26.61■■□□□ 1.85
GABRD-216ENST00000640688 CANXP27824 592 aaKnown RBP26.61■■□□□ 1.85
GABRD-216ENST00000640688 SBF1O95248 1867 aa26.59■■□□□ 1.85
GABRD-216ENST00000640688 ZNF496Q96IT1 587 aaPredicted RBP26.59■■□□□ 1.85
GABRD-216ENST00000640688 GNAT3A8MTJ3 354 aa26.57■■□□□ 1.84
GABRD-216ENST00000640688 TTC5Q8N0Z6 440 aa26.57■■□□□ 1.84
GABRD-216ENST00000640688 SERPINB2P05120 415 aa26.56■■□□□ 1.84
GABRD-216ENST00000640688 PHACTR3Q96KR7 559 aa26.56■■□□□ 1.84
GABRD-216ENST00000640688 CARMIL3Q8ND23 1372 aa26.56■■□□□ 1.84
GABRD-216ENST00000640688 TOMM70O94826 608 aa26.55■■□□□ 1.84
GABRD-216ENST00000640688 EIF5P55010 431 aaKnown RBP26.55■■□□□ 1.84
GABRD-216ENST00000640688 ZNF790Q6PG37 636 aa26.55■■□□□ 1.84
GABRD-216ENST00000640688 GAS2L2Q8NHY3 880 aa26.55■■□□□ 1.84
GABRD-216ENST00000640688 RNF181Q9P0P0 153 aa26.55■■□□□ 1.84
GABRD-216ENST00000640688 DLEC1Q9Y238 1755 aa26.55■■□□□ 1.84
GABRD-216ENST00000640688 TEFQ10587 303 aa26.54■■□□□ 1.84
GABRD-216ENST00000640688 BICDL1Q6ZP65 573 aa26.54■■□□□ 1.84
GABRD-216ENST00000640688 HEG1Q9ULI3 1381 aa26.54■■□□□ 1.84
GABRD-216ENST00000640688 STARD3NLO95772 234 aa26.53■■□□□ 1.84
GABRD-216ENST00000640688 RASSF7Q02833 373 aa26.53■■□□□ 1.84
GABRD-216ENST00000640688 KCNQ3O43525 872 aa26.52■■□□□ 1.84
GABRD-216ENST00000640688 CEMIPQ8WUJ3 1361 aa26.51■■□□□ 1.83
GABRD-216ENST00000640688 PRKAR2BP31323 418 aa26.51■■□□□ 1.83
GABRD-216ENST00000640688 PRELPP51888 382 aa26.51■■□□□ 1.83
GABRD-216ENST00000640688 RSPH6AQ9H0K4 717 aa26.51■■□□□ 1.83
GABRD-216ENST00000640688 SCN7AQ01118 1682 aa26.5■■□□□ 1.83
GABRD-216ENST00000640688 TBC1D9BQ66K14 1250 aa26.5■■□□□ 1.83
GABRD-216ENST00000640688 ANKRD31Q8N7Z5 1873 aa26.5■■□□□ 1.83
GABRD-216ENST00000640688 TBC1D2BQ9UPU7 963 aa26.49■■□□□ 1.83
GABRD-216ENST00000640688 ZNF330Q9Y3S2 320 aaPredicted RBP26.49■■□□□ 1.83
GABRD-216ENST00000640688 A1BGP04217 495 aa26.48■■□□□ 1.83
GABRD-216ENST00000640688 C2CD5Q86YS7 1000 aa26.48■■□□□ 1.83
GABRD-216ENST00000640688 CCDC24Q8N4L8 307 aa26.48■■□□□ 1.83
GABRD-216ENST00000640688 A0A087WZG4 1122 aa26.46■■□□□ 1.83
GABRD-216ENST00000640688 APLP1P51693 650 aa26.46■■□□□ 1.83
GABRD-216ENST00000640688 FMNL2Q96PY5 1086 aa26.46■■□□□ 1.83
GABRD-216ENST00000640688 RRAGCQ9HB90 399 aa26.46■■□□□ 1.83
GABRD-216ENST00000640688 CCDC88AQ3V6T2 1871 aa26.46■■□□□ 1.83
GABRD-216ENST00000640688 BTBD11A6QL63 1104 aa26.45■■□□□ 1.82
GABRD-216ENST00000640688 TTLL6Q8N841 843 aa26.45■■□□□ 1.82
GABRD-216ENST00000640688 TEX13AQ9BXU3 409 aaPredicted RBP26.45■■□□□ 1.82
GABRD-216ENST00000640688 COL11A2P13942 1736 aaPredicted RBP26.45■■□□□ 1.82
GABRD-216ENST00000640688 PRAMEF22A3QJZ6 481 aa26.44■■□□□ 1.82
GABRD-216ENST00000640688 PPP2R1AP30153 589 aa26.44■■□□□ 1.82
GABRD-216ENST00000640688 IL6STP40189 918 aaPredicted RBP26.44■■□□□ 1.82
GABRD-216ENST00000640688 PIP4K2AP48426 406 aaPredicted RBP26.44■■□□□ 1.82
GABRD-216ENST00000640688 RBM46Q8TBY0 533 aaKnown RBP26.44■■□□□ 1.82
GABRD-216ENST00000640688 CFAP53Q96M91 514 aa26.44■■□□□ 1.82
GABRD-216ENST00000640688 KDM2BQ8NHM5 1336 aa26.43■■□□□ 1.82
GABRD-216ENST00000640688 H0YIN7 160 aa26.43■■□□□ 1.82
GABRD-216ENST00000640688 DNAJC5GQ8N7S2 189 aa26.43■■□□□ 1.82
GABRD-216ENST00000640688 TNRC6CQ9HCJ0 1690 aaKnown RBP26.43■■□□□ 1.82
GABRD-216ENST00000640688 HTRA3P83110 453 aa26.42■■□□□ 1.82
GABRD-216ENST00000640688 PRR5LQ6MZQ0 368 aa26.42■■□□□ 1.82
GABRD-216ENST00000640688 MCM10Q7L590 875 aa26.42■■□□□ 1.82
GABRD-216ENST00000640688 USP16Q9Y5T5 823 aa26.42■■□□□ 1.82
GABRD-216ENST00000640688 WDR90Q96KV7 1748 aa26.42■■□□□ 1.82
GABRD-216ENST00000640688 CAMTA2O94983 1202 aa26.41■■□□□ 1.82
GABRD-216ENST00000640688 U2AF1L5P0DN76 240 aaPredicted RBP26.41■■□□□ 1.82
GABRD-216ENST00000640688 U2AF1Q01081 240 aaKnown RBP eCLIP26.41■■□□□ 1.82
GABRD-216ENST00000640688 IFFO2Q5TF58 517 aa26.41■■□□□ 1.82
GABRD-216ENST00000640688 C16orf71Q8IYS4 520 aaPredicted RBP26.41■■□□□ 1.82
GABRD-216ENST00000640688 BCORQ6W2J9 1755 aa26.41■■□□□ 1.82
GABRD-216ENST00000640688 TIAM2Q8IVF5 1701 aa26.4■■□□□ 1.82
GABRD-216ENST00000640688 NFKBIEO00221 500 aa26.4■■□□□ 1.82
GABRD-216ENST00000640688 LMNB1P20700 586 aa26.39■■□□□ 1.82
GABRD-216ENST00000640688 DCTN1Q14203 1278 aa26.39■■□□□ 1.82
GABRD-216ENST00000640688 ZNF622Q969S3 477 aaKnown RBP eCLIP26.39■■□□□ 1.82
GABRD-216ENST00000640688 ZNF219Q9P2Y4 722 aaPredicted RBP26.39■■□□□ 1.82
GABRD-216ENST00000640688 BRIP1Q9BX63 1249 aa26.38■■□□□ 1.81
GABRD-216ENST00000640688 NUDCQ9Y266 331 aa26.38■■□□□ 1.81
GABRD-216ENST00000640688 DZIP3Q86Y13 1208 aaKnown RBP26.36■■□□□ 1.81
GABRD-216ENST00000640688 CACNA1SQ13698 1873 aa26.36■■□□□ 1.81
GABRD-216ENST00000640688 C21orf2O43822 256 aa26.35■■□□□ 1.81
GABRD-216ENST00000640688 PDE6BP35913 854 aa26.35■■□□□ 1.81
GABRD-216ENST00000640688 SETDB2Q96T68 719 aa26.35■■□□□ 1.81
GABRD-216ENST00000640688 FER1L6Q2WGJ9 1857 aa26.34■■□□□ 1.81
GABRD-216ENST00000640688 FSTL1Q12841 308 aa26.34■■□□□ 1.81
GABRD-216ENST00000640688 SLX4Q8IY92 1834 aa26.34■■□□□ 1.81
GABRD-216ENST00000640688 ZC3H4Q9UPT8 1303 aaKnown RBP26.34■■□□□ 1.81
GABRD-216ENST00000640688 GLTPD2A6NH11 291 aa26.33■■□□□ 1.81
GABRD-216ENST00000640688 CNBD1Q8NA66 436 aa26.33■■□□□ 1.81
GABRD-216ENST00000640688 RTF1Q92541 710 aaKnown RBP26.33■■□□□ 1.81
GABRD-216ENST00000640688 NPM2Q86SE8 214 aaKnown RBP26.32■■□□□ 1.8
GABRD-216ENST00000640688 NBPF26B4DH59 902 aa26.31■■□□□ 1.8
GABRD-216ENST00000640688 SNRPA1P09661 255 aaKnown RBP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms