RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 GBP7Q8N8V2 638 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-227ENST00000640648 ZNF396Q96N95 335 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-227ENST00000640648 CAMSAP2Q08AD1 1489 aa9.6□□□□□ -0.87
NECAP1-227ENST00000640648 FYB1O15117 783 aa9.6□□□□□ -0.87
NECAP1-227ENST00000640648 KLHL10Q6JEL2 608 aa9.6□□□□□ -0.87
NECAP1-227ENST00000640648 NUP133Q8WUM0 1156 aa9.6□□□□□ -0.87
NECAP1-227ENST00000640648 NLRP6P59044 892 aa9.59□□□□□ -0.87
NECAP1-227ENST00000640648 IFFO1Q0D2I5 559 aa9.59□□□□□ -0.87
NECAP1-227ENST00000640648 DBN1Q16643 649 aa9.59□□□□□ -0.87
NECAP1-227ENST00000640648 HDXQ7Z353 690 aa9.59□□□□□ -0.87
NECAP1-227ENST00000640648 SH3GL3Q99963 347 aa9.59□□□□□ -0.87
NECAP1-227ENST00000640648 CDK19Q9BWU1 502 aa9.59□□□□□ -0.87
NECAP1-227ENST00000640648 ABCA10Q8WWZ4 1543 aa9.59□□□□□ -0.87
NECAP1-227ENST00000640648 A0A087WUV0 522 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-227ENST00000640648 RRS1Q15050 365 aaKnown RBP9.59□□□□□ -0.87
NECAP1-227ENST00000640648 MAGEA9P43362 315 aa9.59□□□□□ -0.87
NECAP1-227ENST00000640648 CLASRPQ8N2M8 674 aaKnown RBP9.59□□□□□ -0.87
NECAP1-227ENST00000640648 GNAI2P04899 355 aa9.59□□□□□ -0.87
NECAP1-227ENST00000640648 PSMA5P28066 241 aa9.59□□□□□ -0.87
NECAP1-227ENST00000640648 HSP90AB4PQ58FF6 505 aa9.59□□□□□ -0.87
NECAP1-227ENST00000640648 MMS22LQ6ZRQ5 1243 aa9.59□□□□□ -0.87
NECAP1-227ENST00000640648 CLIP2Q9UDT6 1046 aa9.59□□□□□ -0.87
NECAP1-227ENST00000640648 TXNDC2Q86VQ3 553 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 DTNBP1Q96EV8 351 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 DNMBPQ6XZF7 1577 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 CLNS1AP54105 237 aaKnown RBP9.58□□□□□ -0.88
NECAP1-227ENST00000640648 ZBTB17Q13105 803 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 ANKRD1Q15327 319 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 SLFNL1Q499Z3 407 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 CNTROBQ8N137 903 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 TRERF1Q96PN7 1200 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 ANO10Q9NW15 660 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 PLB1Q6P1J6 1458 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 NBPF7P0C2Y1 421 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-227ENST00000640648 RMDN2Q96LZ7 410 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 NEUROD6Q96NK8 337 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 SCAND2PQ9GZW5 306 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-227ENST00000640648 SNAPC4Q5SXM2 1469 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 LMNTD2Q8IXW0 634 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 TTC5Q8N0Z6 440 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 FSD1Q9BTV5 496 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 BCL2L12Q9HB09 334 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 IL1RAPL2Q9NP60 686 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 CFAP45Q9UL16 551 aa9.58□□□□□ -0.88
NECAP1-227ENST00000640648 DDX58O95786 925 aaKnown RBP9.57□□□□□ -0.88
NECAP1-227ENST00000640648 CEBPZQ03701 1054 aaKnown RBP9.57□□□□□ -0.88
NECAP1-227ENST00000640648 CCDC47Q96A33 483 aaKnown RBP9.57□□□□□ -0.88
NECAP1-227ENST00000640648 ZNHIT6Q9NWK9 470 aaKnown RBP9.57□□□□□ -0.88
NECAP1-227ENST00000640648 SMARCA5O60264 1052 aaPredicted RBP9.57□□□□□ -0.88
NECAP1-227ENST00000640648 KIF5CO60282 957 aa9.57□□□□□ -0.88
NECAP1-227ENST00000640648 TRIM27P14373 513 aa9.57□□□□□ -0.88
NECAP1-227ENST00000640648 SSFA2P28290 1259 aa9.57□□□□□ -0.88
NECAP1-227ENST00000640648 CCDC30Q5VVM6 783 aa9.57□□□□□ -0.88
NECAP1-227ENST00000640648 EXOC6BQ9Y2D4 811 aa9.57□□□□□ -0.88
NECAP1-227ENST00000640648 INPP5BP32019 993 aa9.57□□□□□ -0.88
NECAP1-227ENST00000640648 UBE2HP62256 183 aa9.57□□□□□ -0.88
NECAP1-227ENST00000640648 SEPT6Q14141 434 aa9.57□□□□□ -0.88
NECAP1-227ENST00000640648 WWC2Q6AWC2 1192 aa9.57□□□□□ -0.88
NECAP1-227ENST00000640648 SDF4Q9BRK5 362 aa9.57□□□□□ -0.88
NECAP1-227ENST00000640648 CCDC40Q4G0X9 1142 aa9.57□□□□□ -0.88
NECAP1-227ENST00000640648 CPLX2Q6PUV4 134 aaKnown RBP9.57□□□□□ -0.88
NECAP1-227ENST00000640648 GOLGA1Q92805 767 aa9.57□□□□□ -0.88
NECAP1-227ENST00000640648 EXOC4Q96A65 974 aa9.57□□□□□ -0.88
NECAP1-227ENST00000640648 UPF3BQ9BZI7 483 aaKnown RBP9.57□□□□□ -0.88
NECAP1-227ENST00000640648 PRDM4Q9UKN5 801 aa9.57□□□□□ -0.88
NECAP1-227ENST00000640648 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.57□□□□□ -0.88
NECAP1-227ENST00000640648 KDM4AO75164 1064 aa9.56□□□□□ -0.88
NECAP1-227ENST00000640648 NEBLO76041 1014 aa9.56□□□□□ -0.88
NECAP1-227ENST00000640648 MAP2K1Q02750 393 aaPredicted RBP9.56□□□□□ -0.88
NECAP1-227ENST00000640648 RIC3Q7Z5B4 369 aa9.56□□□□□ -0.88
NECAP1-227ENST00000640648 VCXQ9H320 206 aa9.56□□□□□ -0.88
NECAP1-227ENST00000640648 BSDC1Q9NW68 430 aaPredicted RBP9.56□□□□□ -0.88
NECAP1-227ENST00000640648 PPP1R12AO14974 1030 aaPredicted RBP9.56□□□□□ -0.88
NECAP1-227ENST00000640648 TERF2Q15554 542 aa9.56□□□□□ -0.88
NECAP1-227ENST00000640648 NBPF9Q3BBW0 867 aa9.56□□□□□ -0.88
NECAP1-227ENST00000640648 C8orf34Q49A92 452 aa9.56□□□□□ -0.88
NECAP1-227ENST00000640648 APLFQ8IW19 511 aaPredicted RBP9.56□□□□□ -0.88
NECAP1-227ENST00000640648 MIS18AQ9NYP9 233 aa9.56□□□□□ -0.88
NECAP1-227ENST00000640648 PCDHB15Q9Y5E8 787 aa9.56□□□□□ -0.88
NECAP1-227ENST00000640648 PIP4K2BP78356 416 aa9.56□□□□□ -0.88
NECAP1-227ENST00000640648 PSME1Q06323 249 aa9.56□□□□□ -0.88
NECAP1-227ENST00000640648 CKAP4Q07065 602 aaKnown RBP9.56□□□□□ -0.88
NECAP1-227ENST00000640648 RGS22Q8NE09 1264 aa9.56□□□□□ -0.88
NECAP1-227ENST00000640648 GPRASP1Q5JY77 1395 aa9.56□□□□□ -0.88
NECAP1-227ENST00000640648 HDGFL1Q5TGJ6 251 aa9.55□□□□□ -0.88
NECAP1-227ENST00000640648 FAM200AQ8TCP9 573 aa9.55□□□□□ -0.88
NECAP1-227ENST00000640648 C16orf45Q96MC5 204 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-227ENST00000640648 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.55□□□□□ -0.88
NECAP1-227ENST00000640648 PPP6R1Q9UPN7 881 aa9.55□□□□□ -0.88
NECAP1-227ENST00000640648 ADGRF5Q8IZF2 1346 aa9.55□□□□□ -0.88
NECAP1-227ENST00000640648 STK3Q13188 491 aa9.55□□□□□ -0.88
NECAP1-227ENST00000640648 CCDC121Q6ZUS5 278 aa9.55□□□□□ -0.88
NECAP1-227ENST00000640648 EHBP1Q8NDI1 1231 aa9.55□□□□□ -0.88
NECAP1-227ENST00000640648 IQGAP2Q13576 1575 aa9.55□□□□□ -0.88
NECAP1-227ENST00000640648 U2AF2P26368 475 aaKnown RBP eCLIP9.55□□□□□ -0.883e-6■■■■□ 23.7
NECAP1-227ENST00000640648 NAA25Q14CX7 972 aa9.55□□□□□ -0.88
NECAP1-227ENST00000640648 JMYQ8N9B5 988 aa9.55□□□□□ -0.88
NECAP1-227ENST00000640648 FCHSD2O94868 740 aa9.55□□□□□ -0.88
NECAP1-227ENST00000640648 IRX5P78411 483 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-227ENST00000640648 NFE2L2Q16236 605 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms