RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 PALLDQ8WX93 1383 aa11.21□□□□□ -0.61
HLA-B-258ENST00000640615 IRX6P78412 446 aaPredicted RBP11.21□□□□□ -0.61
HLA-B-258ENST00000640615 VSIG10Q8N0Z9 540 aa11.21□□□□□ -0.61
HLA-B-258ENST00000640615 TEX13AQ9BXU3 409 aaPredicted RBP11.21□□□□□ -0.61
HLA-B-258ENST00000640615 KIF16BQ96L93 1317 aa11.2□□□□□ -0.62
HLA-B-258ENST00000640615 LOC102724428A0A0B4J2F2 783 aa11.2□□□□□ -0.62
HLA-B-258ENST00000640615 IPO8O15397 1037 aaKnown RBP11.2□□□□□ -0.62
HLA-B-258ENST00000640615 BRPF1P55201 1214 aaPredicted RBP11.2□□□□□ -0.62
HLA-B-258ENST00000640615 SIK1P57059 783 aa11.2□□□□□ -0.62
HLA-B-258ENST00000640615 R3HDM1Q15032 1099 aaKnown RBP11.2□□□□□ -0.62
HLA-B-258ENST00000640615 ZKSCAN2Q63HK3 967 aa11.2□□□□□ -0.62
HLA-B-258ENST00000640615 DNAJC10Q8IXB1 793 aa11.2□□□□□ -0.62
HLA-B-258ENST00000640615 SLC4A9Q96Q91 983 aa11.2□□□□□ -0.62
HLA-B-258ENST00000640615 CHPF2Q9P2E5 772 aa11.2□□□□□ -0.62
HLA-B-258ENST00000640615 DBF4Q9UBU7 674 aaPredicted RBP11.2□□□□□ -0.62
HLA-B-258ENST00000640615 ITGB4P16144 1822 aa11.2□□□□□ -0.62
HLA-B-258ENST00000640615 SBF2Q86WG5 1849 aa11.19□□□□□ -0.62
HLA-B-258ENST00000640615 STARD3NLO95772 234 aa11.19□□□□□ -0.62
HLA-B-258ENST00000640615 ANXA1P04083 346 aa11.19□□□□□ -0.62
HLA-B-258ENST00000640615 ATP6V1AP38606 617 aa11.19□□□□□ -0.62
HLA-B-258ENST00000640615 PAPPAQ13219 1627 aa11.19□□□□□ -0.62
HLA-B-258ENST00000640615 A1BGP04217 495 aa11.18□□□□□ -0.62
HLA-B-258ENST00000640615 ATF7IPQ6VMQ6 1270 aa11.18□□□□□ -0.62
HLA-B-258ENST00000640615 G2E3Q7L622 706 aa11.18□□□□□ -0.62
HLA-B-258ENST00000640615 CLUAP1Q96AJ1 413 aa11.18□□□□□ -0.62
HLA-B-258ENST00000640615 DDX21Q9NR30 783 aaKnown RBP eCLIP11.18□□□□□ -0.62
HLA-B-258ENST00000640615 NHSQ6T4R5 1651 aa11.17□□□□□ -0.62
HLA-B-258ENST00000640615 APBA3O96018 575 aa11.17□□□□□ -0.62
HLA-B-258ENST00000640615 CYP19A1P11511 503 aaPredicted RBP11.17□□□□□ -0.62
HLA-B-258ENST00000640615 MS4A1P11836 297 aa11.17□□□□□ -0.62
HLA-B-258ENST00000640615 MYL6BP14649 208 aa11.17□□□□□ -0.62
HLA-B-258ENST00000640615 PIP4K2AP48426 406 aaPredicted RBP11.17□□□□□ -0.62
HLA-B-258ENST00000640615 FLIIQ13045 1269 aa11.17□□□□□ -0.62
HLA-B-258ENST00000640615 ITPK1Q13572 414 aa11.17□□□□□ -0.62
HLA-B-258ENST00000640615 FKBP8Q14318 412 aa11.17□□□□□ -0.62
HLA-B-258ENST00000640615 PDIA6Q15084 440 aa11.17□□□□□ -0.62
HLA-B-258ENST00000640615 PROSER3Q2NL68 480 aa11.17□□□□□ -0.62
HLA-B-258ENST00000640615 C20orf194Q5TEA3 1177 aa11.17□□□□□ -0.62
HLA-B-258ENST00000640615 FTSJ3Q8IY81 847 aaKnown RBP11.17□□□□□ -0.62
HLA-B-258ENST00000640615 ARHGAP45Q92619 1136 aa11.17□□□□□ -0.62
HLA-B-258ENST00000640615 API5Q9BZZ5 524 aaKnown RBP11.17□□□□□ -0.62
HLA-B-258ENST00000640615 PHAXQ9H814 394 aaKnown RBP11.17□□□□□ -0.62
HLA-B-258ENST00000640615 HYPKQ9NX55 129 aa11.17□□□□□ -0.62
HLA-B-258ENST00000640615 TNNQ9UQP3 1299 aa11.17□□□□□ -0.62
HLA-B-258ENST00000640615 KAT6BQ8WYB5 2073 aa11.16□□□□□ -0.62
HLA-B-258ENST00000640615 UBR2Q8IWV8 1755 aa11.16□□□□□ -0.62
HLA-B-258ENST00000640615 PTPRCP08575 1304 aa11.16□□□□□ -0.62
HLA-B-258ENST00000640615 ERBB4Q15303 1308 aa11.16□□□□□ -0.62
HLA-B-258ENST00000640615 TRIM27P14373 513 aa11.16□□□□□ -0.62
HLA-B-258ENST00000640615 KCNQ4P56696 695 aa11.16□□□□□ -0.62
HLA-B-258ENST00000640615 FKBP5Q13451 457 aaPredicted RBP11.16□□□□□ -0.62
HLA-B-258ENST00000640615 PDE3AQ14432 1141 aa11.16□□□□□ -0.62
HLA-B-258ENST00000640615 DZIP1LQ8IYY4 767 aaKnown RBP11.16□□□□□ -0.62
HLA-B-258ENST00000640615 PANK1Q8TE04 598 aa11.16□□□□□ -0.62
HLA-B-258ENST00000640615 CCNL1Q9UK58 526 aaPredicted RBP11.16□□□□□ -0.62
HLA-B-258ENST00000640615 NBPF26B4DH59 902 aa11.15□□□□□ -0.62
HLA-B-258ENST00000640615 PLSCR1O15162 318 aa11.15□□□□□ -0.62
HLA-B-258ENST00000640615 AIMP1Q12904 312 aaKnown RBP11.15□□□□□ -0.62
HLA-B-258ENST00000640615 NBPF14Q5TI25 921 aa11.15□□□□□ -0.62
HLA-B-258ENST00000640615 NBPF10Q6P3W6 841 aaKnown RBP11.15□□□□□ -0.62
HLA-B-258ENST00000640615 NBPF15Q8N660 670 aa11.15□□□□□ -0.62
HLA-B-258ENST00000640615 C5P01031 1676 aa11.14□□□□□ -0.63
HLA-B-258ENST00000640615 CASZ1Q86V15 1759 aa11.14□□□□□ -0.63
HLA-B-258ENST00000640615 RLBP1P12271 317 aa11.14□□□□□ -0.63
HLA-B-258ENST00000640615 COPS6Q7L5N1 327 aa11.14□□□□□ -0.63
HLA-B-258ENST00000640615 LINC00116Q8NCU8 138 aa11.14□□□□□ -0.63
HLA-B-258ENST00000640615 XAGE3Q8WTP9 111 aa11.14□□□□□ -0.63
HLA-B-258ENST00000640615 CRBNQ96SW2 442 aa11.14□□□□□ -0.63
HLA-B-258ENST00000640615 CCDC87Q9NVE4 849 aa11.14□□□□□ -0.63
HLA-B-258ENST00000640615 ZNF330Q9Y3S2 320 aaPredicted RBP11.14□□□□□ -0.63
HLA-B-258ENST00000640615 GTF3C3Q9Y5Q9 886 aa11.14□□□□□ -0.63
HLA-B-258ENST00000640615 F6X3S4 739 aa11.13□□□□□ -0.63
HLA-B-258ENST00000640615 DDX58O95786 925 aaKnown RBP11.13□□□□□ -0.63
HLA-B-258ENST00000640615 CRKLP46109 303 aaKnown RBP11.13□□□□□ -0.63
HLA-B-258ENST00000640615 INTS5Q6P9B9 1019 aaKnown RBP11.13□□□□□ -0.63
HLA-B-258ENST00000640615 SLC4A10Q6U841 1118 aa11.13□□□□□ -0.63
HLA-B-258ENST00000640615 NPM2Q86SE8 214 aaKnown RBP11.13□□□□□ -0.63
HLA-B-258ENST00000640615 ARXQ96QS3 562 aa11.13□□□□□ -0.63
HLA-B-258ENST00000640615 ZBTB1Q9Y2K1 713 aa11.13□□□□□ -0.63
HLA-B-258ENST00000640615 COG6Q9Y2V7 657 aa11.13□□□□□ -0.63
HLA-B-258ENST00000640615 BTAF1O14981 1849 aa11.13□□□□□ -0.63
HLA-B-258ENST00000640615 PI4KAP2A4QPH2 592 aa11.12□□□□□ -0.63
HLA-B-258ENST00000640615 TXNRD1Q16881 649 aa11.12□□□□□ -0.63
HLA-B-258ENST00000640615 SLC27A3Q5K4L6 730 aa11.12□□□□□ -0.63
HLA-B-258ENST00000640615 LRP10Q7Z4F1 713 aa11.12□□□□□ -0.63
HLA-B-258ENST00000640615 RIC3Q7Z5B4 369 aa11.12□□□□□ -0.63
HLA-B-258ENST00000640615 ITPRIPQ8IWB1 547 aa11.12□□□□□ -0.63
HLA-B-258ENST00000640615 TMEM57Q8N5G2 664 aa11.12□□□□□ -0.63
HLA-B-258ENST00000640615 PI4KAP1Q8N8J0 262 aa11.12□□□□□ -0.63
HLA-B-258ENST00000640615 EXOC6Q8TAG9 804 aa11.12□□□□□ -0.63
HLA-B-258ENST00000640615 ABCC4O15439 1325 aa11.11□□□□□ -0.63
HLA-B-258ENST00000640615 IL6STP40189 918 aaPredicted RBP11.11□□□□□ -0.63
HLA-B-258ENST00000640615 KSR2Q6VAB6 950 aa11.11□□□□□ -0.63
HLA-B-258ENST00000640615 TTLL7Q6ZT98 887 aa11.11□□□□□ -0.63
HLA-B-258ENST00000640615 ANKRD13DQ6ZTN6 518 aa11.11□□□□□ -0.63
HLA-B-258ENST00000640615 DNAAF4Q8WXU2 420 aa11.11□□□□□ -0.63
HLA-B-258ENST00000640615 LRRC4BQ9NT99 713 aa11.11□□□□□ -0.63
HLA-B-258ENST00000640615 MAP3K2Q9Y2U5 619 aa11.11□□□□□ -0.63
HLA-B-258ENST00000640615 LAMB4A4D0S4 1761 aa11.11□□□□□ -0.63
HLA-B-258ENST00000640615 CNTNAP4Q9C0A0 1308 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms