RNA–Protein interactions for RNA: ENST00000640303.1

PRICKLE2-209, Transcript of prickle planar cell polarity protein 2, humanhuman

TSL 5

Gene PRICKLE2, Length 3,704 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE2-209ENST00000640303 MAP3K5Q99683 1374 aa12.11□□□□□ -0.47
PRICKLE2-209ENST00000640303 MCM2P49736 904 aa12.11□□□□□ -0.47
PRICKLE2-209ENST00000640303 CCDC8Q9H0W5 538 aaPredicted RBP12.11□□□□□ -0.47
PRICKLE2-209ENST00000640303 RGS12O14924 1447 aa12.11□□□□□ -0.47
PRICKLE2-209ENST00000640303 IGSF1Q8N6C5 1336 aa12.1□□□□□ -0.47
PRICKLE2-209ENST00000640303 PRPF40BQ6NWY9 871 aaKnown RBP12.1□□□□□ -0.47
PRICKLE2-209ENST00000640303 AACSQ86V21 672 aa12.1□□□□□ -0.47
PRICKLE2-209ENST00000640303 SYAP1Q96A49 352 aaPredicted RBP12.1□□□□□ -0.47
PRICKLE2-209ENST00000640303 MAP3K2Q9Y2U5 619 aa12.1□□□□□ -0.47
PRICKLE2-209ENST00000640303 SOS1Q07889 1333 aaPredicted RBP12.1□□□□□ -0.47
PRICKLE2-209ENST00000640303 RBM10P98175 930 aaKnown RBP12.1□□□□□ -0.47
PRICKLE2-209ENST00000640303 ZSCAN30Q86W11 494 aa12.1□□□□□ -0.47
PRICKLE2-209ENST00000640303 CCDC83Q8IWF9 413 aa12.1□□□□□ -0.47
PRICKLE2-209ENST00000640303 JAKMIP1Q96N16 626 aaKnown RBP12.1□□□□□ -0.47
PRICKLE2-209ENST00000640303 ARHGEF10O15013 1369 aa12.1□□□□□ -0.47
PRICKLE2-209ENST00000640303 DLC1Q96QB1 1528 aa12.1□□□□□ -0.47
PRICKLE2-209ENST00000640303 FGD1P98174 961 aa12.1□□□□□ -0.47
PRICKLE2-209ENST00000640303 ANKRD26Q9UPS8 1709 aa12.09□□□□□ -0.47
PRICKLE2-209ENST00000640303 RIC3Q7Z5B4 369 aa12.09□□□□□ -0.47
PRICKLE2-209ENST00000640303 GPATCH3Q96I76 525 aa12.09□□□□□ -0.47
PRICKLE2-209ENST00000640303 PRAMEF22A3QJZ6 481 aa12.09□□□□□ -0.47
PRICKLE2-209ENST00000640303 GADD45BO75293 160 aaPredicted RBP12.09□□□□□ -0.47
PRICKLE2-209ENST00000640303 FERMT3Q86UX7 667 aa12.09□□□□□ -0.47
PRICKLE2-209ENST00000640303 ZNF330Q9Y3S2 320 aaPredicted RBP12.09□□□□□ -0.47
PRICKLE2-209ENST00000640303 MBD3O95983 291 aa12.09□□□□□ -0.47
PRICKLE2-209ENST00000640303 STK3Q13188 491 aa12.09□□□□□ -0.47
PRICKLE2-209ENST00000640303 SLC39A6Q13433 755 aa12.09□□□□□ -0.47
PRICKLE2-209ENST00000640303 G3BP1Q13283 466 aaKnown RBP eCLIP12.08□□□□□ -0.48
PRICKLE2-209ENST00000640303 NLRP2Q9NX02 1062 aa12.08□□□□□ -0.48
PRICKLE2-209ENST00000640303 OVOS2A0A0J9YW53 1432 aa12.08□□□□□ -0.48
PRICKLE2-209ENST00000640303 OVOS2Q6IE36 1432 aa12.08□□□□□ -0.48
PRICKLE2-209ENST00000640303 PLEKHO1Q53GL0 409 aaPredicted RBP12.08□□□□□ -0.48
PRICKLE2-209ENST00000640303 KLHDC4Q8TBB5 520 aa12.08□□□□□ -0.48
PRICKLE2-209ENST00000640303 BOLA2Q9H3K6 86 aa12.08□□□□□ -0.48
PRICKLE2-209ENST00000640303 CNPY2Q9Y2B0 182 aa12.08□□□□□ -0.48
PRICKLE2-209ENST00000640303 IBTKQ9P2D0 1353 aaPredicted RBP12.08□□□□□ -0.48
PRICKLE2-209ENST00000640303 FOSBP53539 338 aa12.08□□□□□ -0.48
PRICKLE2-209ENST00000640303 USP48Q86UV5 1035 aa12.08□□□□□ -0.48
PRICKLE2-209ENST00000640303 OSBPL3Q9H4L5 887 aa12.08□□□□□ -0.48
PRICKLE2-209ENST00000640303 FAM13BQ9NYF5 915 aa12.08□□□□□ -0.48
PRICKLE2-209ENST00000640303 TBX22Q9Y458 520 aa12.08□□□□□ -0.48
PRICKLE2-209ENST00000640303 ADAMTS13Q76LX8 1427 aa12.07□□□□□ -0.48
PRICKLE2-209ENST00000640303 NECAB1Q8N987 351 aa12.07□□□□□ -0.48
PRICKLE2-209ENST00000640303 TSPY26PQ9H489 355 aa12.07□□□□□ -0.48
PRICKLE2-209ENST00000640303 DLG5Q8TDM6 1919 aa12.07□□□□□ -0.48
PRICKLE2-209ENST00000640303 ZKSCAN1P17029 563 aaPredicted RBP12.07□□□□□ -0.48
PRICKLE2-209ENST00000640303 AK2P54819 239 aa12.07□□□□□ -0.48
PRICKLE2-209ENST00000640303 FSD1Q9BTV5 496 aa12.07□□□□□ -0.48
PRICKLE2-209ENST00000640303 WDR33Q9C0J8 1336 aaKnown RBP12.07□□□□□ -0.48
PRICKLE2-209ENST00000640303 GOLGA6L4A6NEF3 574 aa12.07□□□□□ -0.48
PRICKLE2-209ENST00000640303 PROSER3Q2NL68 480 aa12.07□□□□□ -0.48
PRICKLE2-209ENST00000640303 RASEFQ8IZ41 740 aa12.07□□□□□ -0.48
PRICKLE2-209ENST00000640303 RUFY2Q8WXA3 655 aa12.07□□□□□ -0.48
PRICKLE2-209ENST00000640303 HSP90AB4PQ58FF6 505 aa12.06□□□□□ -0.48
PRICKLE2-209ENST00000640303 LRSAM1Q6UWE0 723 aa12.06□□□□□ -0.48
PRICKLE2-209ENST00000640303 RAB11FIP3O75154 756 aa12.06□□□□□ -0.48
PRICKLE2-209ENST00000640303 ZNF830Q96NB3 372 aaPredicted RBP12.06□□□□□ -0.48
PRICKLE2-209ENST00000640303 EIF4A1P60842 406 aaKnown RBP12.06□□□□□ -0.48
PRICKLE2-209ENST00000640303 ORAI2Q96SN7 254 aa12.06□□□□□ -0.48
PRICKLE2-209ENST00000640303 DBF4Q9UBU7 674 aaPredicted RBP12.06□□□□□ -0.48
PRICKLE2-209ENST00000640303 PTPRUQ92729 1446 aa12.05□□□□□ -0.48
PRICKLE2-209ENST00000640303 CEP170BQ9Y4F5 1589 aaPredicted RBP12.05□□□□□ -0.48
PRICKLE2-209ENST00000640303 HTATSF1O43719 755 aaKnown RBP12.05□□□□□ -0.48
PRICKLE2-209ENST00000640303 PPFIA3O75145 1194 aa12.05□□□□□ -0.48
PRICKLE2-209ENST00000640303 ZNF445P59923 1031 aa12.05□□□□□ -0.48
PRICKLE2-209ENST00000640303 PDRG1Q9NUG6 133 aa12.05□□□□□ -0.48
PRICKLE2-209ENST00000640303 PLEKHG1Q9ULL1 1385 aa12.05□□□□□ -0.48
PRICKLE2-209ENST00000640303 SPATA31D1Q6ZQQ2 1576 aa12.05□□□□□ -0.48
PRICKLE2-209ENST00000640303 GLRX3O76003 335 aaKnown RBP12.05□□□□□ -0.48
PRICKLE2-209ENST00000640303 GLIPR1L2Q4G1C9 344 aa12.05□□□□□ -0.48
PRICKLE2-209ENST00000640303 SSH3Q8TE77 659 aa12.05□□□□□ -0.48
PRICKLE2-209ENST00000640303 USP25Q9UHP3 1055 aa12.05□□□□□ -0.48
PRICKLE2-209ENST00000640303 SNX14Q9Y5W7 946 aa12.05□□□□□ -0.48
PRICKLE2-209ENST00000640303 NDUFB9Q9Y6M9 179 aa12.05□□□□□ -0.48
PRICKLE2-209ENST00000640303 PHF14O94880 888 aa12.04□□□□□ -0.48
PRICKLE2-209ENST00000640303 CYP2E1P05181 493 aaPredicted RBP12.04□□□□□ -0.48
PRICKLE2-209ENST00000640303 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.04□□□□□ -0.48
PRICKLE2-209ENST00000640303 BRD1O95696 1058 aa12.04□□□□□ -0.48
PRICKLE2-209ENST00000640303 HSP90B1P14625 803 aaKnown RBP12.04□□□□□ -0.48
PRICKLE2-209ENST00000640303 DNAJC2Q99543 621 aaKnown RBP12.04□□□□□ -0.48
PRICKLE2-209ENST00000640303 HCLS1P14317 486 aaPredicted RBP12.04□□□□□ -0.48
PRICKLE2-209ENST00000640303 NEXNQ0ZGT2 675 aa12.04□□□□□ -0.48
PRICKLE2-209ENST00000640303 LIMCH1Q9UPQ0 1083 aa12.04□□□□□ -0.48
PRICKLE2-209ENST00000640303 CYP46A1Q9Y6A2 500 aa12.04□□□□□ -0.48
PRICKLE2-209ENST00000640303 KNDC1Q76NI1 1749 aa12.04□□□□□ -0.48
PRICKLE2-209ENST00000640303 RIMS1Q86UR5 1692 aaKnown RBP12.04□□□□□ -0.48
PRICKLE2-209ENST00000640303 SGSM2O43147 1006 aa12.03□□□□□ -0.48
PRICKLE2-209ENST00000640303 STX6O43752 255 aa12.03□□□□□ -0.48
PRICKLE2-209ENST00000640303 ANAPC15P60006 121 aa12.03□□□□□ -0.48
PRICKLE2-209ENST00000640303 ECHDC1Q9NTX5 307 aa12.03□□□□□ -0.48
PRICKLE2-209ENST00000640303 USP31Q70CQ4 1352 aa12.03□□□□□ -0.48
PRICKLE2-209ENST00000640303 DDX58O95786 925 aaKnown RBP12.03□□□□□ -0.48
PRICKLE2-209ENST00000640303 GJB2P29033 226 aa12.03□□□□□ -0.48
PRICKLE2-209ENST00000640303 FAM173BQ6P4H8 233 aa12.03□□□□□ -0.48
PRICKLE2-209ENST00000640303 ANKRD24Q8TF21 1146 aa12.03□□□□□ -0.48
PRICKLE2-209ENST00000640303 RAPGEF4Q8WZA2 1011 aa12.03□□□□□ -0.48
PRICKLE2-209ENST00000640303 IP6K1Q92551 441 aa12.03□□□□□ -0.48
PRICKLE2-209ENST00000640303 HSPA4P34932 840 aa12.03□□□□□ -0.48
PRICKLE2-209ENST00000640303 PTH1RQ03431 593 aa12.03□□□□□ -0.48
PRICKLE2-209ENST00000640303 BEND3Q5T5X7 828 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms