RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 CCDC196A0A1B0GTZ2 297 aa17.15■□□□□ 0.34
HNRNPU-226ENST00000640218 PHF8Q9UPP1 1060 aa17.15■□□□□ 0.34
HNRNPU-226ENST00000640218 CTCFLQ8NI51 663 aaPredicted RBP17.15■□□□□ 0.34
HNRNPU-226ENST00000640218 PPP1R12BO60237 982 aaPredicted RBP17.15■□□□□ 0.34
HNRNPU-226ENST00000640218 PLCD4Q9BRC7 762 aa17.15■□□□□ 0.34
HNRNPU-226ENST00000640218 HYPKQ9NX55 129 aa17.15■□□□□ 0.34
HNRNPU-226ENST00000640218 AMOTL2Q9Y2J4 779 aa17.15■□□□□ 0.34
HNRNPU-226ENST00000640218 SLC12A7Q9Y666 1083 aa17.15■□□□□ 0.34
HNRNPU-226ENST00000640218 CAMSAP2Q08AD1 1489 aa17.14■□□□□ 0.33
HNRNPU-226ENST00000640218 NEBLO76041 1014 aa17.14■□□□□ 0.33
HNRNPU-226ENST00000640218 CCDC96Q2M329 555 aa17.14■□□□□ 0.33
HNRNPU-226ENST00000640218 MAGI1Q96QZ7 1491 aaPredicted RBP17.14■□□□□ 0.33
HNRNPU-226ENST00000640218 A0A087WZG4 1122 aa17.14■□□□□ 0.33
HNRNPU-226ENST00000640218 JAKMIP3Q5VZ66 844 aa17.14■□□□□ 0.33
HNRNPU-226ENST00000640218 ANKRD18BA2A2Z9 1011 aa17.14■□□□□ 0.33
HNRNPU-226ENST00000640218 LARP6Q9BRS8 491 aaKnown RBP17.14■□□□□ 0.33
HNRNPU-226ENST00000640218 GPTP24298 496 aa17.13■□□□□ 0.33
HNRNPU-226ENST00000640218 IQCA1Q86XH1 822 aa17.13■□□□□ 0.33
HNRNPU-226ENST00000640218 CD109Q6YHK3 1445 aa17.13■□□□□ 0.33
HNRNPU-226ENST00000640218 HSP90AB3PQ58FF7 597 aa17.13■□□□□ 0.33
HNRNPU-226ENST00000640218 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
HNRNPU-226ENST00000640218 ZNF622Q969S3 477 aaKnown RBP eCLIP17.13■□□□□ 0.332e-18■■□□□ 13.2
HNRNPU-226ENST00000640218 UBA5Q9GZZ9 404 aa17.13■□□□□ 0.33
HNRNPU-226ENST00000640218 SH2B1Q9NRF2 756 aaPredicted RBP17.13■□□□□ 0.33
HNRNPU-226ENST00000640218 WASLO00401 505 aaPredicted RBP17.13■□□□□ 0.33
HNRNPU-226ENST00000640218 HMGB1P09429 215 aaKnown RBP17.13■□□□□ 0.33
HNRNPU-226ENST00000640218 CCDC148Q8NFR7 591 aa17.13■□□□□ 0.33
HNRNPU-226ENST00000640218 CALRP27797 417 aaKnown RBP17.13■□□□□ 0.33
HNRNPU-226ENST00000640218 DBF4Q9UBU7 674 aaPredicted RBP17.13■□□□□ 0.33
HNRNPU-226ENST00000640218 CCDC102AQ96A19 550 aa17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 RPGRQ92834 1020 aaKnown RBP17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 ANO10Q9NW15 660 aa17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 PTPN23Q9H3S7 1636 aa17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 CCT2P78371 535 aaKnown RBP17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 GBP2P32456 591 aaPredicted RBP17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 SSRP1Q08945 709 aaKnown RBP17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 DNMBPQ6XZF7 1577 aa17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 SCAND2PQ9GZW5 306 aaPredicted RBP17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 FAM135AQ9P2D6 1515 aa17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 C11orf95C9JLR9 678 aaPredicted RBP17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 IFIT3O14879 490 aaKnown RBP17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 CCDC183Q5T5S1 534 aa17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 TSG101Q99816 390 aa17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 ZBTB3Q9H5J0 574 aa17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 ADGRF5Q8IZF2 1346 aa17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 ESPNB1AK53 854 aa17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 TAF3Q5VWG9 929 aa17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 VTI1AQ96AJ9 217 aa17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 MAP3K2Q9Y2U5 619 aa17.12■□□□□ 0.33
HNRNPU-226ENST00000640218 POTEJP0CG39 1038 aa17.11■□□□□ 0.33
HNRNPU-226ENST00000640218 CEBPAP49715 358 aaPredicted RBP17.11■□□□□ 0.33
HNRNPU-226ENST00000640218 SPA17Q15506 151 aa17.11■□□□□ 0.33
HNRNPU-226ENST00000640218 KAT6BQ8WYB5 2073 aa17.11■□□□□ 0.33
HNRNPU-226ENST00000640218 FBXO31Q5XUX0 539 aaPredicted RBP17.11■□□□□ 0.33
HNRNPU-226ENST00000640218 DHX37Q8IY37 1157 aaKnown RBP17.11■□□□□ 0.33
HNRNPU-226ENST00000640218 IQGAP2Q13576 1575 aa17.11■□□□□ 0.33
HNRNPU-226ENST00000640218 PCF11O94913 1555 aaKnown RBP17.11■□□□□ 0.33
HNRNPU-226ENST00000640218 TOM1O60784 492 aa17.11■□□□□ 0.33
HNRNPU-226ENST00000640218 FKBP15Q5T1M5 1219 aa17.11■□□□□ 0.33
HNRNPU-226ENST00000640218 GOLGA8BA8MQT2 603 aa17.1■□□□□ 0.33
HNRNPU-226ENST00000640218 HMGB2P26583 209 aaKnown RBP17.1■□□□□ 0.33
HNRNPU-226ENST00000640218 KIAA0586Q9BVV6 1533 aa17.1■□□□□ 0.33
HNRNPU-226ENST00000640218 GOLGA8AA7E2F4 631 aa17.1■□□□□ 0.33
HNRNPU-226ENST00000640218 SFPQP23246 707 aaKnown RBP eCLIP17.1■□□□□ 0.33
HNRNPU-226ENST00000640218 NLRP5P59047 1200 aa17.1■□□□□ 0.33
HNRNPU-226ENST00000640218 FLIIQ13045 1269 aa17.1■□□□□ 0.33
HNRNPU-226ENST00000640218 SCLT1Q96NL6 688 aa17.1■□□□□ 0.33
HNRNPU-226ENST00000640218 KIF14Q15058 1648 aa17.1■□□□□ 0.33
HNRNPU-226ENST00000640218 CACNA2D4Q7Z3S7 1137 aa17.1■□□□□ 0.33
HNRNPU-226ENST00000640218 LIMCH1Q9UPQ0 1083 aa17.1■□□□□ 0.33
HNRNPU-226ENST00000640218 PTPRCP08575 1304 aa17.1■□□□□ 0.33
HNRNPU-226ENST00000640218 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.1■□□□□ 0.332e-10■■■□□ 16.6
HNRNPU-226ENST00000640218 UBXN4Q92575 508 aa17.1■□□□□ 0.33
HNRNPU-226ENST00000640218 TRIM27P14373 513 aa17.09■□□□□ 0.33
HNRNPU-226ENST00000640218 PHAXQ9H814 394 aaKnown RBP17.09■□□□□ 0.33
HNRNPU-226ENST00000640218 GOLGA6L7A0A1B0GV03 622 aa17.09■□□□□ 0.33
HNRNPU-226ENST00000640218 RNF41Q9H4P4 317 aaPredicted RBP17.09■□□□□ 0.33
HNRNPU-226ENST00000640218 CUL5Q93034 780 aa17.08■□□□□ 0.33
HNRNPU-226ENST00000640218 ADGRL1O94910 1474 aa17.08■□□□□ 0.33
HNRNPU-226ENST00000640218 GOLIM4O00461 696 aa17.08■□□□□ 0.33
HNRNPU-226ENST00000640218 TRIM21P19474 475 aaKnown RBP17.08■□□□□ 0.32
HNRNPU-226ENST00000640218 CATIPQ7Z7H3 387 aa17.08■□□□□ 0.32
HNRNPU-226ENST00000640218 CCDC144CPQ8IYA2 1237 aa17.08■□□□□ 0.32
HNRNPU-226ENST00000640218 EVI5LQ96CN4 794 aa17.08■□□□□ 0.32
HNRNPU-226ENST00000640218 ATP5J2-PTCD1G3V325 749 aa17.08■□□□□ 0.32
HNRNPU-226ENST00000640218 EXOC5O00471 708 aa17.08■□□□□ 0.32
HNRNPU-226ENST00000640218 TMEM266Q2M3C6 531 aa17.08■□□□□ 0.32
HNRNPU-226ENST00000640218 PPP4R3AQ6IN85 833 aa17.08■□□□□ 0.32
HNRNPU-226ENST00000640218 TOP1P11387 765 aaKnown RBP17.08■□□□□ 0.32
HNRNPU-226ENST00000640218 SSFA2P28290 1259 aa17.08■□□□□ 0.32
HNRNPU-226ENST00000640218 RAB34Q9BZG1 259 aa17.08■□□□□ 0.32
HNRNPU-226ENST00000640218 BIN2Q9UBW5 565 aaPredicted RBP17.08■□□□□ 0.32
HNRNPU-226ENST00000640218 PTPN14Q15678 1187 aa17.07■□□□□ 0.32
HNRNPU-226ENST00000640218 CNNM3Q8NE01 707 aa17.07■□□□□ 0.32
HNRNPU-226ENST00000640218 CCDC194A0A1B0GVG4 234 aa17.07■□□□□ 0.32
HNRNPU-226ENST00000640218 PLEKHH1Q9ULM0 1364 aa17.07■□□□□ 0.32
HNRNPU-226ENST00000640218 EZRP15311 586 aaKnown RBP17.07■□□□□ 0.32
HNRNPU-226ENST00000640218 CKAP2LQ8IYA6 745 aa17.07■□□□□ 0.32
HNRNPU-226ENST00000640218 KRT28Q7Z3Y7 464 aa17.07■□□□□ 0.32
HNRNPU-226ENST00000640218 CETN2P41208 172 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms