RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 ADCY9O60503 1353 aa11.47□□□□□ -0.57
NECAP1-225ENST00000640209 LMO7Q8WWI1 1683 aa11.47□□□□□ -0.57
NECAP1-225ENST00000640209 TRIM6-TRIM34B2RNG4 842 aa11.47□□□□□ -0.57
NECAP1-225ENST00000640209 NPHP4O75161 1426 aaPredicted RBP11.47□□□□□ -0.57
NECAP1-225ENST00000640209 BAG4O95429 457 aaKnown RBP11.47□□□□□ -0.57
NECAP1-225ENST00000640209 MAP4K4O95819 1239 aaPredicted RBP11.47□□□□□ -0.57
NECAP1-225ENST00000640209 TEFQ10587 303 aa11.47□□□□□ -0.57
NECAP1-225ENST00000640209 ANKRD24Q8TF21 1146 aa11.47□□□□□ -0.57
NECAP1-225ENST00000640209 SURF6O75683 361 aaKnown RBP11.47□□□□□ -0.57
NECAP1-225ENST00000640209 CYP2E1P05181 493 aaPredicted RBP11.47□□□□□ -0.57
NECAP1-225ENST00000640209 PLEKHO1Q53GL0 409 aaPredicted RBP11.47□□□□□ -0.57
NECAP1-225ENST00000640209 DNAAF4Q8WXU2 420 aa11.47□□□□□ -0.57
NECAP1-225ENST00000640209 CHAMP1Q96JM3 812 aa11.47□□□□□ -0.57
NECAP1-225ENST00000640209 FBXO3Q9UK99 471 aa11.47□□□□□ -0.57
NECAP1-225ENST00000640209 PHRF1Q9P1Y6 1649 aaKnown RBP11.46□□□□□ -0.57
NECAP1-225ENST00000640209 CLEC17AQ6ZS10 378 aa11.46□□□□□ -0.57
NECAP1-225ENST00000640209 SRGAP3O43295 1099 aa11.46□□□□□ -0.58
NECAP1-225ENST00000640209 ZDHHC9Q9Y397 364 aa11.46□□□□□ -0.58
NECAP1-225ENST00000640209 SLIT3O75094 1523 aa11.46□□□□□ -0.58
NECAP1-225ENST00000640209 NCAPD2Q15021 1401 aa11.45□□□□□ -0.58
NECAP1-225ENST00000640209 HOXB7P09629 217 aa11.45□□□□□ -0.58
NECAP1-225ENST00000640209 RHPN1Q8TCX5 695 aa11.45□□□□□ -0.58
NECAP1-225ENST00000640209 ADAMTSL3P82987 1691 aa11.45□□□□□ -0.58
NECAP1-225ENST00000640209 ST18O60284 1047 aa11.45□□□□□ -0.58
NECAP1-225ENST00000640209 NEK4P51957 841 aa11.45□□□□□ -0.58
NECAP1-225ENST00000640209 KRT28Q7Z3Y7 464 aa11.45□□□□□ -0.58
NECAP1-225ENST00000640209 PI4K2BQ8TCG2 481 aa11.45□□□□□ -0.58
NECAP1-225ENST00000640209 GIGYF1O75420 1035 aaPredicted RBP11.44□□□□□ -0.58
NECAP1-225ENST00000640209 DDX17Q92841 729 aaKnown RBP11.44□□□□□ -0.58
NECAP1-225ENST00000640209 ANO2Q9NQ90 1003 aa11.44□□□□□ -0.58
NECAP1-225ENST00000640209 RRAGDQ9NQL2 400 aaPredicted RBP11.44□□□□□ -0.58
NECAP1-225ENST00000640209 C1orf141Q5JVX7 400 aa11.44□□□□□ -0.58
NECAP1-225ENST00000640209 GRPEL1Q9HAV7 217 aa11.44□□□□□ -0.58
NECAP1-225ENST00000640209 MAP3K2Q9Y2U5 619 aa11.44□□□□□ -0.58
NECAP1-225ENST00000640209 TRPM3Q9HCF6 1732 aaPredicted RBP11.43□□□□□ -0.58
NECAP1-225ENST00000640209 ZC3H6P61129 1189 aaKnown RBP11.43□□□□□ -0.58
NECAP1-225ENST00000640209 CWF19L2Q2TBE0 894 aaKnown RBP11.43□□□□□ -0.58
NECAP1-225ENST00000640209 AMOTQ4VCS5 1084 aa11.43□□□□□ -0.58
NECAP1-225ENST00000640209 MCTP1Q6DN14 999 aa11.43□□□□□ -0.58
NECAP1-225ENST00000640209 NOL8Q76FK4 1167 aaKnown RBP11.43□□□□□ -0.58
NECAP1-225ENST00000640209 TMX3Q96JJ7 454 aa11.43□□□□□ -0.58
NECAP1-225ENST00000640209 RGPD5Q99666 1765 aa11.43□□□□□ -0.58
NECAP1-225ENST00000640209 HEG1Q9ULI3 1381 aa11.43□□□□□ -0.58
NECAP1-225ENST00000640209 RAB11FIP3O75154 756 aa11.43□□□□□ -0.58
NECAP1-225ENST00000640209 PROSER2Q86WR7 435 aaPredicted RBP11.43□□□□□ -0.58
NECAP1-225ENST00000640209 FAM43AQ8N2R8 423 aa11.43□□□□□ -0.58
NECAP1-225ENST00000640209 AOX1Q06278 1338 aa11.42□□□□□ -0.58
NECAP1-225ENST00000640209 MRE11P49959 708 aa11.42□□□□□ -0.58
NECAP1-225ENST00000640209 DBF4Q9UBU7 674 aaPredicted RBP11.42□□□□□ -0.58
NECAP1-225ENST00000640209 PA2G4Q9UQ80 394 aaKnown RBP11.42□□□□□ -0.58
NECAP1-225ENST00000640209 NUCB2P80303 420 aa11.42□□□□□ -0.58
NECAP1-225ENST00000640209 SKOR2Q2VWA4 1001 aaPredicted RBP11.42□□□□□ -0.58
NECAP1-225ENST00000640209 FOXD4L5Q5VV16 416 aaPredicted RBP11.42□□□□□ -0.58
NECAP1-225ENST00000640209 FOXD4L4Q8WXT5 416 aaPredicted RBP11.42□□□□□ -0.58
NECAP1-225ENST00000640209 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.42□□□□□ -0.58
NECAP1-225ENST00000640209 C1orf167Q5SNV9 1468 aa11.41□□□□□ -0.58
NECAP1-225ENST00000640209 SLC39A6Q13433 755 aa11.41□□□□□ -0.58
NECAP1-225ENST00000640209 TMEM132AQ24JP5 1023 aa11.41□□□□□ -0.58
NECAP1-225ENST00000640209 KIF1BPQ96EK5 621 aa11.41□□□□□ -0.58
NECAP1-225ENST00000640209 UPF3BQ9BZI7 483 aaKnown RBP11.41□□□□□ -0.58
NECAP1-225ENST00000640209 CWC22Q9HCG8 908 aaKnown RBP11.41□□□□□ -0.58
NECAP1-225ENST00000640209 LMBRD1Q9NUN5 540 aa11.41□□□□□ -0.58
NECAP1-225ENST00000640209 PDIA6Q15084 440 aa11.41□□□□□ -0.58
NECAP1-225ENST00000640209 DDX49Q9Y6V7 483 aaKnown RBP11.41□□□□□ -0.58
NECAP1-225ENST00000640209 CAMTA1Q9Y6Y1 1673 aa11.4□□□□□ -0.58
NECAP1-225ENST00000640209 KSR2Q6VAB6 950 aa11.4□□□□□ -0.58
NECAP1-225ENST00000640209 KAZALD1Q96I82 304 aa11.4□□□□□ -0.58
NECAP1-225ENST00000640209 SIPA1L3O60292 1781 aaPredicted RBP11.4□□□□□ -0.58
NECAP1-225ENST00000640209 ERBB3P21860 1342 aa11.4□□□□□ -0.59
NECAP1-225ENST00000640209 PDIA4P13667 645 aaKnown RBP11.4□□□□□ -0.59
NECAP1-225ENST00000640209 AIMP1Q12904 312 aaKnown RBP11.4□□□□□ -0.59
NECAP1-225ENST00000640209 KLHL40Q2TBA0 621 aa11.4□□□□□ -0.59
NECAP1-225ENST00000640209 OVOS2A0A0G2JMS6 1433 aa11.38□□□□□ -0.59
NECAP1-225ENST00000640209 GOLGA6L22H0YM25 854 aa11.38□□□□□ -0.59
NECAP1-225ENST00000640209 SGSM2O43147 1006 aa11.38□□□□□ -0.59
NECAP1-225ENST00000640209 MCCP23508 829 aa11.38□□□□□ -0.59
NECAP1-225ENST00000640209 HSPA4P34932 840 aa11.38□□□□□ -0.59
NECAP1-225ENST00000640209 MTX1Q13505 466 aa11.38□□□□□ -0.59
NECAP1-225ENST00000640209 CUL4AQ13619 759 aa11.38□□□□□ -0.59
NECAP1-225ENST00000640209 CABLES1Q8TDN4 633 aa11.38□□□□□ -0.59
NECAP1-225ENST00000640209 IL17RAQ96F46 866 aa11.38□□□□□ -0.59
NECAP1-225ENST00000640209 SUCLG2Q96I99 432 aa11.38□□□□□ -0.59
NECAP1-225ENST00000640209 ANO8Q9HCE9 1232 aaPredicted RBP11.38□□□□□ -0.59
NECAP1-225ENST00000640209 C9orf78Q9NZ63 289 aaPredicted RBP11.38□□□□□ -0.59
NECAP1-225ENST00000640209 KDM6AO15550 1401 aaPredicted RBP11.38□□□□□ -0.59
NECAP1-225ENST00000640209 PTMSP20962 102 aa11.38□□□□□ -0.59
NECAP1-225ENST00000640209 ANAPC15P60006 121 aa11.38□□□□□ -0.59
NECAP1-225ENST00000640209 OS9Q13438 667 aaPredicted RBP11.38□□□□□ -0.59
NECAP1-225ENST00000640209 RASEFQ8IZ41 740 aa11.38□□□□□ -0.59
NECAP1-225ENST00000640209 LSG1Q9H089 658 aaKnown RBP11.38□□□□□ -0.59
NECAP1-225ENST00000640209 PRPF40AO75400 957 aaKnown RBP11.37□□□□□ -0.59
NECAP1-225ENST00000640209 ALDH1L1O75891 902 aa11.37□□□□□ -0.59
NECAP1-225ENST00000640209 GPT2Q8TD30 523 aa11.37□□□□□ -0.59
NECAP1-225ENST00000640209 C19orf44Q9H6X5 657 aa11.37□□□□□ -0.59
NECAP1-225ENST00000640209 NLRP2Q9NX02 1062 aa11.37□□□□□ -0.59
NECAP1-225ENST00000640209 RBM27Q9P2N5 1060 aaKnown RBP11.37□□□□□ -0.59
NECAP1-225ENST00000640209 NSFL1CQ9UNZ2 370 aaKnown RBP11.37□□□□□ -0.59
NECAP1-225ENST00000640209 ADAMTS7Q9UKP4 1686 aa11.37□□□□□ -0.59
NECAP1-225ENST00000640209 USP42Q9H9J4 1324 aaKnown RBP11.37□□□□□ -0.59
NECAP1-225ENST00000640209 NCLP19338 710 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms