RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 NGEFQ8N5V2 710 aa10.41□□□□□ -0.74
SCARB2-220ENST00000640076 GDPD2Q9HCC8 539 aa10.41□□□□□ -0.74
SCARB2-220ENST00000640076 POLR3EQ9NVU0 708 aa10.41□□□□□ -0.74
SCARB2-220ENST00000640076 SALL2Q9Y467 1007 aaPredicted RBP10.41□□□□□ -0.74
SCARB2-220ENST00000640076 PLCH1Q4KWH8 1693 aa10.41□□□□□ -0.74
SCARB2-220ENST00000640076 WDR17Q8IZU2 1322 aa10.41□□□□□ -0.74
SCARB2-220ENST00000640076 NEFLP07196 543 aa10.41□□□□□ -0.74
SCARB2-220ENST00000640076 NEFMP07197 916 aa10.41□□□□□ -0.74
SCARB2-220ENST00000640076 NLRP2Q9NX02 1062 aa10.41□□□□□ -0.74
SCARB2-220ENST00000640076 BTG4Q9NY30 223 aa10.41□□□□□ -0.74
SCARB2-220ENST00000640076 OSBPP22059 807 aa10.4□□□□□ -0.74
SCARB2-220ENST00000640076 TMPOP42166 694 aaKnown RBP10.4□□□□□ -0.74
SCARB2-220ENST00000640076 RRP7AQ9Y3A4 280 aaKnown RBP10.4□□□□□ -0.74
SCARB2-220ENST00000640076 LRP6O75581 1613 aa10.4□□□□□ -0.74
SCARB2-220ENST00000640076 POM121CA8CG34 1229 aa10.39□□□□□ -0.75
SCARB2-220ENST00000640076 STRN4Q9NRL3 753 aa10.39□□□□□ -0.75
SCARB2-220ENST00000640076 NWD2Q9ULI1 1742 aa10.39□□□□□ -0.75
SCARB2-220ENST00000640076 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.39□□□□□ -0.75
SCARB2-220ENST00000640076 CLCN1P35523 988 aa10.39□□□□□ -0.75
SCARB2-220ENST00000640076 EVA1CP58658 441 aa10.39□□□□□ -0.75
SCARB2-220ENST00000640076 NFE2L2Q16236 605 aa10.39□□□□□ -0.75
SCARB2-220ENST00000640076 LARP1Q6PKG0 1096 aaKnown RBP10.39□□□□□ -0.75
SCARB2-220ENST00000640076 ZNF521Q96K83 1311 aa10.39□□□□□ -0.75
SCARB2-220ENST00000640076 NRAPQ86VF7 1730 aa10.38□□□□□ -0.75
SCARB2-220ENST00000640076 DLG5Q8TDM6 1919 aa10.38□□□□□ -0.75
SCARB2-220ENST00000640076 CARNS1A5YM72 827 aa10.38□□□□□ -0.75
SCARB2-220ENST00000640076 RFC5P40937 340 aa10.38□□□□□ -0.75
SCARB2-220ENST00000640076 TOM1L2Q6ZVM7 507 aa10.38□□□□□ -0.75
SCARB2-220ENST00000640076 CARD10Q9BWT7 1032 aa10.38□□□□□ -0.75
SCARB2-220ENST00000640076 SLIT2O94813 1529 aa10.38□□□□□ -0.75
SCARB2-220ENST00000640076 CRB1P82279 1406 aa10.37□□□□□ -0.75
SCARB2-220ENST00000640076 CENPBP07199 599 aaPredicted RBP10.37□□□□□ -0.75
SCARB2-220ENST00000640076 SSTR3P32745 418 aaPredicted RBP10.37□□□□□ -0.75
SCARB2-220ENST00000640076 RIPK4P57078 832 aa10.37□□□□□ -0.75
SCARB2-220ENST00000640076 IFNL1Q8IU54 200 aa10.37□□□□□ -0.75
SCARB2-220ENST00000640076 FBXO41Q8TF61 875 aa10.37□□□□□ -0.75
SCARB2-220ENST00000640076 BEGAINQ9BUH8 593 aa10.37□□□□□ -0.75
SCARB2-220ENST00000640076 GPCPD1Q9NPB8 672 aa10.37□□□□□ -0.75
SCARB2-220ENST00000640076 CANXP27824 592 aaKnown RBP10.36□□□□□ -0.75
SCARB2-220ENST00000640076 MTHFSDQ2M296 383 aaKnown RBP10.36□□□□□ -0.75
SCARB2-220ENST00000640076 POTEHQ6S545 545 aa10.36□□□□□ -0.75
SCARB2-220ENST00000640076 RAPGEF4Q8WZA2 1011 aa10.36□□□□□ -0.75
SCARB2-220ENST00000640076 C8orf37Q96NL8 207 aa10.36□□□□□ -0.75
SCARB2-220ENST00000640076 TRIM35Q9UPQ4 493 aa10.36□□□□□ -0.75
SCARB2-220ENST00000640076 MEGF6O75095 1541 aa10.36□□□□□ -0.75
SCARB2-220ENST00000640076 GAS2L2Q8NHY3 880 aa10.35□□□□□ -0.75
SCARB2-220ENST00000640076 NGLY1Q96IV0 654 aa10.35□□□□□ -0.75
SCARB2-220ENST00000640076 PLEKHG2Q9H7P9 1386 aa10.35□□□□□ -0.75
SCARB2-220ENST00000640076 PDE3BQ13370 1112 aa10.35□□□□□ -0.75
SCARB2-220ENST00000640076 TMEM259Q4ZIN3 620 aa10.35□□□□□ -0.75
SCARB2-220ENST00000640076 MTMR14Q8NCE2 650 aa10.35□□□□□ -0.75
SCARB2-220ENST00000640076 KIAA1522Q9P206 1035 aaPredicted RBP10.35□□□□□ -0.75
SCARB2-220ENST00000640076 BCL9LQ86UU0 1499 aa10.35□□□□□ -0.75
SCARB2-220ENST00000640076 TATP17735 454 aaPredicted RBP10.34□□□□□ -0.75
SCARB2-220ENST00000640076 RFX1P22670 979 aa10.34□□□□□ -0.75
SCARB2-220ENST00000640076 AMOTQ4VCS5 1084 aa10.34□□□□□ -0.75
SCARB2-220ENST00000640076 PLEKHO1Q53GL0 409 aaPredicted RBP10.34□□□□□ -0.75
SCARB2-220ENST00000640076 GOLGA2Q08379 1002 aa10.34□□□□□ -0.75
SCARB2-220ENST00000640076 LMOD3Q0VAK6 560 aa10.34□□□□□ -0.75
SCARB2-220ENST00000640076 MEX3CQ5U5Q3 659 aaKnown RBP10.34□□□□□ -0.75
SCARB2-220ENST00000640076 MYSM1Q5VVJ2 828 aa10.34□□□□□ -0.75
SCARB2-220ENST00000640076 UNC5CLQ8IV45 518 aa10.34□□□□□ -0.75
SCARB2-220ENST00000640076 WDR63Q8IWG1 891 aa10.34□□□□□ -0.75
SCARB2-220ENST00000640076 CDCA7LQ96GN5 454 aa10.34□□□□□ -0.75
SCARB2-220ENST00000640076 VRTNQ9H8Y1 702 aa10.34□□□□□ -0.75
SCARB2-220ENST00000640076 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.34□□□□□ -0.75
SCARB2-220ENST00000640076 PARP4Q9UKK3 1724 aaKnown RBP10.34□□□□□ -0.75
SCARB2-220ENST00000640076 OVOS2A0A0G2JMS6 1433 aa10.33□□□□□ -0.76
SCARB2-220ENST00000640076 PKD1L3Q7Z443 1732 aa10.33□□□□□ -0.76
SCARB2-220ENST00000640076 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.33□□□□□ -0.76
SCARB2-220ENST00000640076 PTGDRQ13258 359 aa10.33□□□□□ -0.76
SCARB2-220ENST00000640076 SPATA31A1Q5TZJ5 1347 aa10.32□□□□□ -0.76
SCARB2-220ENST00000640076 IL2RBP14784 551 aa10.32□□□□□ -0.76
SCARB2-220ENST00000640076 ABL2P42684 1182 aa10.32□□□□□ -0.76
SCARB2-220ENST00000640076 MDM2Q00987 491 aaPredicted RBP10.32□□□□□ -0.76
SCARB2-220ENST00000640076 DSG2Q14126 1118 aa10.32□□□□□ -0.76
SCARB2-220ENST00000640076 ZNF530Q6P9A1 599 aaPredicted RBP10.32□□□□□ -0.76
SCARB2-220ENST00000640076 MAP3K5Q99683 1374 aa10.32□□□□□ -0.76
SCARB2-220ENST00000640076 SPATA31A5Q5VU36 1347 aa10.32□□□□□ -0.76
SCARB2-220ENST00000640076 SPATA31A7Q8IWB4 1347 aa10.32□□□□□ -0.76
SCARB2-220ENST00000640076 DISP2A7MBM2 1401 aa10.32□□□□□ -0.76
SCARB2-220ENST00000640076 GNAT3A8MTJ3 354 aa10.32□□□□□ -0.76
SCARB2-220ENST00000640076 THUMPD2Q9BTF0 503 aaKnown RBP10.32□□□□□ -0.76
SCARB2-220ENST00000640076 USP21Q9UK80 565 aa10.32□□□□□ -0.76
SCARB2-220ENST00000640076 GNEQ9Y223 722 aaKnown RBP10.32□□□□□ -0.76
SCARB2-220ENST00000640076 WNK3Q9BYP7 1800 aa10.31□□□□□ -0.76
SCARB2-220ENST00000640076 HTATSF1O43719 755 aaKnown RBP10.31□□□□□ -0.76
SCARB2-220ENST00000640076 CLK2P49760 499 aaKnown RBP10.31□□□□□ -0.76
SCARB2-220ENST00000640076 SLFN5Q08AF3 891 aa10.31□□□□□ -0.76
SCARB2-220ENST00000640076 DCTN1Q14203 1278 aa10.31□□□□□ -0.76
SCARB2-220ENST00000640076 VPS72Q15906 364 aa10.31□□□□□ -0.76
SCARB2-220ENST00000640076 MRRFQ96E11 262 aaKnown RBP10.31□□□□□ -0.76
SCARB2-220ENST00000640076 SPG7Q9UQ90 795 aa10.31□□□□□ -0.76
SCARB2-220ENST00000640076 AFF2P51816 1311 aa10.31□□□□□ -0.76
SCARB2-220ENST00000640076 IL16Q14005 1332 aa10.31□□□□□ -0.76
SCARB2-220ENST00000640076 AKAP4Q5JQC9 854 aa10.3□□□□□ -0.76
SCARB2-220ENST00000640076 MCM10Q7L590 875 aa10.3□□□□□ -0.76
SCARB2-220ENST00000640076 TRMT2AQ8IZ69 625 aaKnown RBP10.3□□□□□ -0.76
SCARB2-220ENST00000640076 RTF1Q92541 710 aaKnown RBP10.3□□□□□ -0.76
SCARB2-220ENST00000640076 THRAP3Q9Y2W1 955 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms