RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 ERBB3P21860 1342 aa12.37□□□□□ -0.43
HNRNPU-224ENST00000640056 SOX12O15370 315 aa12.36□□□□□ -0.43
HNRNPU-224ENST00000640056 VAMP4O75379 141 aa12.36□□□□□ -0.43
HNRNPU-224ENST00000640056 APBA3O96018 575 aa12.36□□□□□ -0.43
HNRNPU-224ENST00000640056 SSFA2P28290 1259 aa12.36□□□□□ -0.43
HNRNPU-224ENST00000640056 GAS2L2Q8NHY3 880 aa12.36□□□□□ -0.43
HNRNPU-224ENST00000640056 ANP32BQ92688 251 aaKnown RBP12.36□□□□□ -0.43
HNRNPU-224ENST00000640056 COG3Q96JB2 828 aa12.36□□□□□ -0.43
HNRNPU-224ENST00000640056 CFAP44Q96MT7 982 aa12.36□□□□□ -0.43
HNRNPU-224ENST00000640056 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
HNRNPU-224ENST00000640056 CDC45O75419 566 aa12.35□□□□□ -0.43
HNRNPU-224ENST00000640056 BAG4O95429 457 aaKnown RBP12.35□□□□□ -0.43
HNRNPU-224ENST00000640056 NASPP49321 788 aaPredicted RBP12.35□□□□□ -0.43
HNRNPU-224ENST00000640056 SIRT2Q8IXJ6 389 aa12.35□□□□□ -0.43
HNRNPU-224ENST00000640056 DDX49Q9Y6V7 483 aaKnown RBP12.35□□□□□ -0.43
HNRNPU-224ENST00000640056 EXOC5O00471 708 aa12.34□□□□□ -0.43
HNRNPU-224ENST00000640056 CALD1Q05682 793 aaKnown RBP12.34□□□□□ -0.43
HNRNPU-224ENST00000640056 IP6K1Q92551 441 aa12.34□□□□□ -0.43
HNRNPU-224ENST00000640056 SPON1Q9HCB6 807 aa12.34□□□□□ -0.43
HNRNPU-224ENST00000640056 RABEP1Q15276 862 aa12.33□□□□□ -0.43
HNRNPU-224ENST00000640056 EZH2Q15910 746 aaKnown RBP12.33□□□□□ -0.43
HNRNPU-224ENST00000640056 ZSCAN30Q86W11 494 aa12.33□□□□□ -0.43
HNRNPU-224ENST00000640056 C1orf115Q9H7X2 142 aa12.33□□□□□ -0.43
HNRNPU-224ENST00000640056 TNS1Q9HBL0 1735 aaKnown RBP12.33□□□□□ -0.44
HNRNPU-224ENST00000640056 ABCC4O15439 1325 aa12.33□□□□□ -0.44
HNRNPU-224ENST00000640056 PLSCR1O15162 318 aa12.33□□□□□ -0.44
HNRNPU-224ENST00000640056 NUCB2P80303 420 aa12.33□□□□□ -0.44
HNRNPU-224ENST00000640056 BCL11BQ9C0K0 894 aaPredicted RBP12.33□□□□□ -0.44
HNRNPU-224ENST00000640056 LRRC37A3O60309 1634 aa12.33□□□□□ -0.44
HNRNPU-224ENST00000640056 RTL1A6NKG5 1358 aa12.32□□□□□ -0.44
HNRNPU-224ENST00000640056 PRKAR2BP31323 418 aa12.32□□□□□ -0.44
HNRNPU-224ENST00000640056 ZNF445P59923 1031 aa12.32□□□□□ -0.44
HNRNPU-224ENST00000640056 ANKRD24Q8TF21 1146 aa12.32□□□□□ -0.44
HNRNPU-224ENST00000640056 TNS2Q63HR2 1409 aa12.32□□□□□ -0.44
HNRNPU-224ENST00000640056 IL2RBP14784 551 aa12.32□□□□□ -0.44
HNRNPU-224ENST00000640056 GNAI1P63096 354 aa12.32□□□□□ -0.44
HNRNPU-224ENST00000640056 NFE2L2Q16236 605 aa12.32□□□□□ -0.44
HNRNPU-224ENST00000640056 NBPF14Q5TI25 921 aa12.32□□□□□ -0.44
HNRNPU-224ENST00000640056 IFT57Q9NWB7 429 aa12.32□□□□□ -0.44
HNRNPU-224ENST00000640056 NLRP2Q9NX02 1062 aa12.32□□□□□ -0.44
HNRNPU-224ENST00000640056 KIF24Q5T7B8 1368 aa12.31□□□□□ -0.44
HNRNPU-224ENST00000640056 HS1BP3Q53T59 392 aa12.31□□□□□ -0.44
HNRNPU-224ENST00000640056 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
HNRNPU-224ENST00000640056 MARCH10Q8NA82 808 aaPredicted RBP12.31□□□□□ -0.44
HNRNPU-224ENST00000640056 ANKRD26Q9UPS8 1709 aa12.31□□□□□ -0.44
HNRNPU-224ENST00000640056 PEAK1Q9H792 1746 aa12.3□□□□□ -0.44
HNRNPU-224ENST00000640056 OFD1O75665 1012 aa12.3□□□□□ -0.44
HNRNPU-224ENST00000640056 CYP2E1P05181 493 aaPredicted RBP12.3□□□□□ -0.44
HNRNPU-224ENST00000640056 ZNF853P0CG23 659 aa12.3□□□□□ -0.44
HNRNPU-224ENST00000640056 GSPT1P15170 499 aaKnown RBP12.3□□□□□ -0.44
HNRNPU-224ENST00000640056 PLEKHM2Q8IWE5 1019 aa12.3□□□□□ -0.44
HNRNPU-224ENST00000640056 TSPYL6Q8N831 410 aa12.3□□□□□ -0.44
HNRNPU-224ENST00000640056 TERF1P54274 439 aa12.3□□□□□ -0.44
HNRNPU-224ENST00000640056 KIAA1211Q6ZU35 1233 aa12.3□□□□□ -0.44
HNRNPU-224ENST00000640056 USP26Q9BXU7 913 aa12.3□□□□□ -0.44
HNRNPU-224ENST00000640056 API5Q9BZZ5 524 aaKnown RBP12.3□□□□□ -0.44
HNRNPU-224ENST00000640056 PDCL3Q9H2J4 239 aa12.3□□□□□ -0.44
HNRNPU-224ENST00000640056 DCTPP1Q9H773 170 aa12.3□□□□□ -0.44
HNRNPU-224ENST00000640056 CWC22Q9HCG8 908 aaKnown RBP12.3□□□□□ -0.44
HNRNPU-224ENST00000640056 MSNP26038 577 aaKnown RBP12.29□□□□□ -0.44
HNRNPU-224ENST00000640056 MCTP1Q6DN14 999 aa12.29□□□□□ -0.44
HNRNPU-224ENST00000640056 PHACTR3Q96KR7 559 aa12.29□□□□□ -0.44
HNRNPU-224ENST00000640056 LMBRD1Q9NUN5 540 aa12.29□□□□□ -0.44
HNRNPU-224ENST00000640056 MAP3K19Q56UN5 1328 aa12.29□□□□□ -0.44
HNRNPU-224ENST00000640056 KCNQ2O43526 872 aa12.28□□□□□ -0.44
HNRNPU-224ENST00000640056 HOXC9P31274 260 aa12.28□□□□□ -0.44
HNRNPU-224ENST00000640056 AMPHP49418 695 aa12.28□□□□□ -0.44
HNRNPU-224ENST00000640056 ZMYND15Q9H091 742 aa12.28□□□□□ -0.44
HNRNPU-224ENST00000640056 MBIPQ9NS73 344 aa12.28□□□□□ -0.44
HNRNPU-224ENST00000640056 POLKQ9UBT6 870 aa12.28□□□□□ -0.44
HNRNPU-224ENST00000640056 TWISTNBQ3B726 338 aaPredicted RBP12.28□□□□□ -0.44
HNRNPU-224ENST00000640056 ZSCAN23Q3MJ62 389 aa12.28□□□□□ -0.44
HNRNPU-224ENST00000640056 TTC22Q5TAA0 569 aa12.28□□□□□ -0.44
HNRNPU-224ENST00000640056 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.28□□□□□ -0.44
HNRNPU-224ENST00000640056 WNK3Q9BYP7 1800 aa12.28□□□□□ -0.44
HNRNPU-224ENST00000640056 INTS3Q68E01 1043 aaKnown RBP12.27□□□□□ -0.44
HNRNPU-224ENST00000640056 PKNOX2Q96KN3 472 aa12.27□□□□□ -0.44
HNRNPU-224ENST00000640056 THUMPD2Q9BTF0 503 aaKnown RBP12.27□□□□□ -0.44
HNRNPU-224ENST00000640056 RGPD3A6NKT7 1758 aaPredicted RBP12.27□□□□□ -0.45
HNRNPU-224ENST00000640056 RGPD4Q7Z3J3 1758 aa12.27□□□□□ -0.45
HNRNPU-224ENST00000640056 ELL2O00472 640 aaPredicted RBP12.27□□□□□ -0.45
HNRNPU-224ENST00000640056 CAVIN1Q6NZI2 390 aaKnown RBP12.27□□□□□ -0.45
HNRNPU-224ENST00000640056 RREB1Q92766 1687 aa12.26□□□□□ -0.45
HNRNPU-224ENST00000640056 FAM208AQ9UK61 1670 aaKnown RBP12.26□□□□□ -0.45
HNRNPU-224ENST00000640056 NCLP19338 710 aaKnown RBP12.26□□□□□ -0.45
HNRNPU-224ENST00000640056 PDLIM2Q96JY6 352 aa12.26□□□□□ -0.45
HNRNPU-224ENST00000640056 NOL7Q9UMY1 257 aaKnown RBP12.26□□□□□ -0.45
HNRNPU-224ENST00000640056 ST18O60284 1047 aa12.25□□□□□ -0.45
HNRNPU-224ENST00000640056 HMOX1P09601 288 aa12.25□□□□□ -0.45
HNRNPU-224ENST00000640056 LMOD3Q0VAK6 560 aa12.25□□□□□ -0.45
HNRNPU-224ENST00000640056 LTN1O94822 1766 aa12.25□□□□□ -0.45
HNRNPU-224ENST00000640056 ZNF500O60304 480 aaPredicted RBP12.25□□□□□ -0.45
HNRNPU-224ENST00000640056 CASC1Q6TDU7 716 aa12.25□□□□□ -0.45
HNRNPU-224ENST00000640056 C8orf58Q8NAV2 365 aa12.25□□□□□ -0.45
HNRNPU-224ENST00000640056 RBSNQ9H1K0 784 aa12.25□□□□□ -0.45
HNRNPU-224ENST00000640056 FLT4P35916 1363 aa12.24□□□□□ -0.45
HNRNPU-224ENST00000640056 IL13P35225 146 aa12.24□□□□□ -0.45
HNRNPU-224ENST00000640056 RPAP2Q8IXW5 612 aaPredicted RBP12.24□□□□□ -0.45
HNRNPU-224ENST00000640056 C16orf71Q8IYS4 520 aaPredicted RBP12.24□□□□□ -0.45
HNRNPU-224ENST00000640056 ANKRD44Q8N8A2 993 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms