RNA–Protein interactions for RNA: ENST00000640043.1

MCF2L2-214, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 5

Gene MCF2L2, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-214ENST00000640043 AMIGO3Q86WK7 504 aa12.78□□□□□ -0.36
MCF2L2-214ENST00000640043 JMYQ8N9B5 988 aa12.78□□□□□ -0.36
MCF2L2-214ENST00000640043 STK24Q9Y6E0 443 aa12.78□□□□□ -0.36
MCF2L2-214ENST00000640043 C10orf71Q711Q0 1435 aa12.78□□□□□ -0.36
MCF2L2-214ENST00000640043 GNPATO15228 680 aa12.77□□□□□ -0.37
MCF2L2-214ENST00000640043 MMP10P09238 476 aa12.77□□□□□ -0.37
MCF2L2-214ENST00000640043 FBLN1P23142 703 aa12.77□□□□□ -0.37
MCF2L2-214ENST00000640043 LINC00116Q8NCU8 138 aa12.77□□□□□ -0.37
MCF2L2-214ENST00000640043 TMOD3Q9NYL9 352 aa12.77□□□□□ -0.37
MCF2L2-214ENST00000640043 TONSLQ96HA7 1378 aa12.77□□□□□ -0.37
MCF2L2-214ENST00000640043 ANKRD26Q9UPS8 1709 aa12.76□□□□□ -0.37
MCF2L2-214ENST00000640043 ST20-MTHFSA0A0A6YYL1 179 aa12.76□□□□□ -0.37
MCF2L2-214ENST00000640043 TMF1P82094 1093 aa12.76□□□□□ -0.37
MCF2L2-214ENST00000640043 CDCA8Q53HL2 280 aa12.76□□□□□ -0.37
MCF2L2-214ENST00000640043 FOXD4L5Q5VV16 416 aaPredicted RBP12.76□□□□□ -0.37
MCF2L2-214ENST00000640043 FOXD4L4Q8WXT5 416 aaPredicted RBP12.76□□□□□ -0.37
MCF2L2-214ENST00000640043 GZF1Q9H116 711 aaPredicted RBP12.76□□□□□ -0.37
MCF2L2-214ENST00000640043 N4BP2Q86UW6 1770 aaPredicted RBP12.76□□□□□ -0.37
MCF2L2-214ENST00000640043 ATP6V1AP38606 617 aa12.75□□□□□ -0.37
MCF2L2-214ENST00000640043 TRAPPC3LQ5T215 181 aa12.75□□□□□ -0.37
MCF2L2-214ENST00000640043 RC3H1Q5TC82 1133 aaKnown RBP12.75□□□□□ -0.37
MCF2L2-214ENST00000640043 C16orf71Q8IYS4 520 aaPredicted RBP12.75□□□□□ -0.37
MCF2L2-214ENST00000640043 KDM2BQ8NHM5 1336 aa12.75□□□□□ -0.37
MCF2L2-214ENST00000640043 KLRG1Q96E93 195 aa12.75□□□□□ -0.37
MCF2L2-214ENST00000640043 GGNBP2Q9H3C7 697 aa12.75□□□□□ -0.37
MCF2L2-214ENST00000640043 CCDC87Q9NVE4 849 aa12.75□□□□□ -0.37
MCF2L2-214ENST00000640043 RTCBQ9Y3I0 505 aaKnown RBP12.75□□□□□ -0.37
MCF2L2-214ENST00000640043 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
MCF2L2-214ENST00000640043 ZC3H4Q9UPT8 1303 aaKnown RBP12.74□□□□□ -0.37
MCF2L2-214ENST00000640043 IFNL2Q8IZJ0 200 aa12.74□□□□□ -0.37
MCF2L2-214ENST00000640043 KRI1Q8N9T8 703 aaKnown RBP12.74□□□□□ -0.37
MCF2L2-214ENST00000640043 BCS1LQ9Y276 419 aa12.74□□□□□ -0.37
MCF2L2-214ENST00000640043 WASHC2AQ641Q2 1341 aa12.73□□□□□ -0.37
MCF2L2-214ENST00000640043 ITPK1Q13572 414 aa12.73□□□□□ -0.37
MCF2L2-214ENST00000640043 ARHGAP27Q6ZUM4 889 aa12.73□□□□□ -0.37
MCF2L2-214ENST00000640043 TNRC6CQ9HCJ0 1690 aaKnown RBP12.73□□□□□ -0.37
MCF2L2-214ENST00000640043 KDRP35968 1356 aa12.72□□□□□ -0.37
MCF2L2-214ENST00000640043 CNTNAP4Q9C0A0 1308 aa12.72□□□□□ -0.37
MCF2L2-214ENST00000640043 COL5A3P25940 1745 aaPredicted RBP12.72□□□□□ -0.37
MCF2L2-214ENST00000640043 ERVV-2B6SEH9 535 aa12.72□□□□□ -0.37
MCF2L2-214ENST00000640043 E2F4Q16254 413 aa12.72□□□□□ -0.37
MCF2L2-214ENST00000640043 ZNF428Q96B54 188 aa12.72□□□□□ -0.37
MCF2L2-214ENST00000640043 NMRK2Q9NPI5 230 aa12.72□□□□□ -0.37
MCF2L2-214ENST00000640043 ASAP1Q9ULH1 1129 aa12.72□□□□□ -0.37
MCF2L2-214ENST00000640043 PARP3Q9Y6F1 533 aa12.72□□□□□ -0.37
MCF2L2-214ENST00000640043 A0A0G2JLW4 131 aa12.71□□□□□ -0.37
MCF2L2-214ENST00000640043 FCHSD2O94868 740 aa12.71□□□□□ -0.37
MCF2L2-214ENST00000640043 HSP90AB1P08238 724 aaKnown RBP12.71□□□□□ -0.37
MCF2L2-214ENST00000640043 PHKG2P15735 406 aa12.71□□□□□ -0.37
MCF2L2-214ENST00000640043 PIM2Q9P1W9 311 aa12.71□□□□□ -0.37
MCF2L2-214ENST00000640043 WWC3Q9ULE0 1092 aa12.71□□□□□ -0.37
MCF2L2-214ENST00000640043 SBF1O95248 1867 aa12.71□□□□□ -0.37
MCF2L2-214ENST00000640043 ZNF316A6NFI3 1004 aaPredicted RBP12.7□□□□□ -0.38
MCF2L2-214ENST00000640043 RPS6KA4O75676 772 aa12.7□□□□□ -0.38
MCF2L2-214ENST00000640043 DPEP1P16444 411 aa12.7□□□□□ -0.38
MCF2L2-214ENST00000640043 RFC4P35249 363 aa12.7□□□□□ -0.38
MCF2L2-214ENST00000640043 PDE4DQ08499 809 aa12.7□□□□□ -0.38
MCF2L2-214ENST00000640043 C9orf131Q5VYM1 1079 aa12.7□□□□□ -0.38
MCF2L2-214ENST00000640043 DCAF5Q96JK2 942 aa12.7□□□□□ -0.38
MCF2L2-214ENST00000640043 CHMP4AQ9BY43 222 aa12.7□□□□□ -0.38
MCF2L2-214ENST00000640043 ATG3Q9NT62 314 aa12.7□□□□□ -0.38
MCF2L2-214ENST00000640043 MYH14Q7Z406 1995 aaKnown RBP12.69□□□□□ -0.38
MCF2L2-214ENST00000640043 GYS1P13807 737 aa12.69□□□□□ -0.38
MCF2L2-214ENST00000640043 DALRD3Q5D0E6 543 aaKnown RBP12.69□□□□□ -0.38
MCF2L2-214ENST00000640043 SMC1BQ8NDV3 1235 aa12.69□□□□□ -0.38
MCF2L2-214ENST00000640043 PRELPP51888 382 aa12.68□□□□□ -0.38
MCF2L2-214ENST00000640043 SMIM5Q71RC9 77 aa12.68□□□□□ -0.38
MCF2L2-214ENST00000640043 EYA1Q99502 592 aa12.68□□□□□ -0.38
MCF2L2-214ENST00000640043 EMILIN1Q9Y6C2 1016 aa12.68□□□□□ -0.38
MCF2L2-214ENST00000640043 TRIM66O15016 1216 aa12.67□□□□□ -0.38
MCF2L2-214ENST00000640043 KCNA3P22001 575 aa12.67□□□□□ -0.38
MCF2L2-214ENST00000640043 C1QBPQ07021 282 aaKnown RBP12.67□□□□□ -0.38
MCF2L2-214ENST00000640043 COL13A1Q5TAT6 717 aaPredicted RBP12.67□□□□□ -0.38
MCF2L2-214ENST00000640043 SERPINA10Q9UK55 444 aa12.67□□□□□ -0.38
MCF2L2-214ENST00000640043 ZBTB12Q9Y330 459 aaPredicted RBP12.67□□□□□ -0.38
MCF2L2-214ENST00000640043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.66□□□□□ -0.38
MCF2L2-214ENST00000640043 TNS4Q8IZW8 715 aa12.66□□□□□ -0.38
MCF2L2-214ENST00000640043 CLUAP1Q96AJ1 413 aa12.66□□□□□ -0.38
MCF2L2-214ENST00000640043 ZFP91Q96JP5 570 aaPredicted RBP12.66□□□□□ -0.38
MCF2L2-214ENST00000640043 DCAF8Q5TAQ9 597 aa12.65□□□□□ -0.38
MCF2L2-214ENST00000640043 RNF181Q9P0P0 153 aa12.65□□□□□ -0.38
MCF2L2-214ENST00000640043 KCPQ6ZWJ8 1503 aa12.65□□□□□ -0.38
MCF2L2-214ENST00000640043 KDM6AO15550 1401 aaPredicted RBP12.64□□□□□ -0.39
MCF2L2-214ENST00000640043 PPM1GO15355 546 aaPredicted RBP12.64□□□□□ -0.39
MCF2L2-214ENST00000640043 AMOTQ4VCS5 1084 aa12.64□□□□□ -0.39
MCF2L2-214ENST00000640043 SLC4A9Q96Q91 983 aa12.64□□□□□ -0.39
MCF2L2-214ENST00000640043 RBM42Q9BTD8 480 aaKnown RBP12.64□□□□□ -0.39
MCF2L2-214ENST00000640043 CCDC97Q96F63 343 aaPredicted RBP12.63□□□□□ -0.39
MCF2L2-214ENST00000640043 CARD14Q9BXL6 1004 aa12.63□□□□□ -0.39
MCF2L2-214ENST00000640043 FAM117AQ9C073 453 aa12.63□□□□□ -0.39
MCF2L2-214ENST00000640043 USP42Q9H9J4 1324 aaKnown RBP12.62□□□□□ -0.39
MCF2L2-214ENST00000640043 VEGFAP15692 232 aaPredicted RBP12.62□□□□□ -0.39
MCF2L2-214ENST00000640043 PLEKHO1Q53GL0 409 aaPredicted RBP12.62□□□□□ -0.39
MCF2L2-214ENST00000640043 RRAGCQ9HB90 399 aa12.62□□□□□ -0.39
MCF2L2-214ENST00000640043 POLKQ9UBT6 870 aa12.62□□□□□ -0.39
MCF2L2-214ENST00000640043 LMNB1P20700 586 aa12.61□□□□□ -0.39
MCF2L2-214ENST00000640043 CRKLP46109 303 aaKnown RBP12.61□□□□□ -0.39
MCF2L2-214ENST00000640043 CABP4P57796 275 aa12.61□□□□□ -0.39
MCF2L2-214ENST00000640043 DLEC1Q9Y238 1755 aa12.61□□□□□ -0.39
MCF2L2-214ENST00000640043 GLTPD2A6NH11 291 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms