RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 ZBTB40Q9NUA8 1239 aa17.57■□□□□ 0.4
ATRIP-208ENST00000639561 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.56■□□□□ 0.4
ATRIP-208ENST00000639561 ITGB4P16144 1822 aa17.56■□□□□ 0.4
ATRIP-208ENST00000639561 TOGARAM1Q9Y4F4 1720 aa17.56■□□□□ 0.4
ATRIP-208ENST00000639561 CHL1O00533 1208 aa17.55■□□□□ 0.4
ATRIP-208ENST00000639561 HMGB2P26583 209 aaKnown RBP17.55■□□□□ 0.4
ATRIP-208ENST00000639561 KRT24Q2M2I5 525 aa17.55■□□□□ 0.4
ATRIP-208ENST00000639561 CYP27B1O15528 508 aa17.54■□□□□ 0.4
ATRIP-208ENST00000639561 ERICH6Q7L0X2 663 aa17.54■□□□□ 0.4
ATRIP-208ENST00000639561 ARHGAP45Q92619 1136 aa17.54■□□□□ 0.4
ATRIP-208ENST00000639561 LRRC4BQ9NT99 713 aa17.54■□□□□ 0.4
ATRIP-208ENST00000639561 PDZRN3Q9UPQ7 1066 aa17.54■□□□□ 0.4
ATRIP-208ENST00000639561 VIRMAQ69YN4 1812 aaKnown RBP17.53■□□□□ 0.4
ATRIP-208ENST00000639561 HDAC1Q13547 482 aaPredicted RBP17.53■□□□□ 0.4
ATRIP-208ENST00000639561 ZBTB7AO95365 584 aa17.52■□□□□ 0.4
ATRIP-208ENST00000639561 NKX1-1Q15270 411 aaPredicted RBP17.52■□□□□ 0.4
ATRIP-208ENST00000639561 MTFR1LQ9H019 292 aa17.52■□□□□ 0.4
ATRIP-208ENST00000639561 TUBGCP6Q96RT7 1819 aa17.52■□□□□ 0.4
ATRIP-208ENST00000639561 ABCC4O15439 1325 aa17.52■□□□□ 0.39
ATRIP-208ENST00000639561 ZNF827Q17R98 1081 aa17.52■□□□□ 0.39
ATRIP-208ENST00000639561 PDGFDQ9GZP0 370 aaPredicted RBP17.52■□□□□ 0.39
ATRIP-208ENST00000639561 CCNL1Q9UK58 526 aaPredicted RBP17.52■□□□□ 0.39
ATRIP-208ENST00000639561 AKT1S1Q96B36 256 aa17.51■□□□□ 0.39
ATRIP-208ENST00000639561 C5P01031 1676 aa17.51■□□□□ 0.39
ATRIP-208ENST00000639561 IFNL2Q8IZJ0 200 aa17.5■□□□□ 0.39
ATRIP-208ENST00000639561 SMARCC1Q92922 1105 aaPredicted RBP17.5■□□□□ 0.39
ATRIP-208ENST00000639561 GAS2L2Q8NHY3 880 aa17.5■□□□□ 0.39
ATRIP-208ENST00000639561 MIS18AQ9NYP9 233 aa17.5■□□□□ 0.39
ATRIP-208ENST00000639561 ZBTB7BO15156 539 aaPredicted RBP17.49■□□□□ 0.39
ATRIP-208ENST00000639561 MPRIPQ6WCQ1 1025 aa17.49■□□□□ 0.39
ATRIP-208ENST00000639561 ZBTB47Q9UFB7 747 aaPredicted RBP17.49■□□□□ 0.39
ATRIP-208ENST00000639561 TAF1LQ8IZX4 1826 aa17.49■□□□□ 0.39
ATRIP-208ENST00000639561 PALLDQ8WX93 1383 aa17.49■□□□□ 0.39
ATRIP-208ENST00000639561 RTF1Q92541 710 aaKnown RBP17.48■□□□□ 0.39
ATRIP-208ENST00000639561 ATF5Q9Y2D1 282 aaPredicted RBP17.48■□□□□ 0.39
ATRIP-208ENST00000639561 SLC16A10Q8TF71 515 aa17.48■□□□□ 0.39
ATRIP-208ENST00000639561 PHKG2P15735 406 aa17.47■□□□□ 0.39
ATRIP-208ENST00000639561 PTGER2P43116 358 aa17.47■□□□□ 0.39
ATRIP-208ENST00000639561 TFCP2L1Q9NZI6 479 aa17.47■□□□□ 0.39
ATRIP-208ENST00000639561 SMC5Q8IY18 1101 aa17.47■□□□□ 0.39
ATRIP-208ENST00000639561 PLEKHO1Q53GL0 409 aaPredicted RBP17.46■□□□□ 0.39
ATRIP-208ENST00000639561 COL24A1Q17RW2 1714 aa17.46■□□□□ 0.39
ATRIP-208ENST00000639561 HSP90AB1P08238 724 aaKnown RBP17.46■□□□□ 0.39
ATRIP-208ENST00000639561 AMOTQ4VCS5 1084 aa17.46■□□□□ 0.39
ATRIP-208ENST00000639561 API5Q9BZZ5 524 aaKnown RBP17.46■□□□□ 0.39
ATRIP-208ENST00000639561 DCAF8L1A6NGE4 600 aa17.45■□□□□ 0.38
ATRIP-208ENST00000639561 KCNQ4P56696 695 aa17.45■□□□□ 0.38
ATRIP-208ENST00000639561 TMOD3Q9NYL9 352 aa17.45■□□□□ 0.38
ATRIP-208ENST00000639561 TSPYL4Q9UJ04 414 aa17.45■□□□□ 0.38
ATRIP-208ENST00000639561 PNPLA7Q6ZV29 1317 aa17.45■□□□□ 0.38
ATRIP-208ENST00000639561 C1orf115Q9H7X2 142 aa17.45■□□□□ 0.38
ATRIP-208ENST00000639561 GNAT3A8MTJ3 354 aa17.44■□□□□ 0.38
ATRIP-208ENST00000639561 PIGBQ92521 554 aa17.44■□□□□ 0.38
ATRIP-208ENST00000639561 HTATSF1O43719 755 aaKnown RBP17.44■□□□□ 0.38
ATRIP-208ENST00000639561 MAP3K5Q99683 1374 aa17.43■□□□□ 0.38
ATRIP-208ENST00000639561 SEC24BO95487 1268 aa17.43■□□□□ 0.38
ATRIP-208ENST00000639561 C4BP0C0L5 1744 aa17.43■□□□□ 0.38
ATRIP-208ENST00000639561 SGIP1Q9BQI5 828 aa17.43■□□□□ 0.38
ATRIP-208ENST00000639561 ZNF530Q6P9A1 599 aaPredicted RBP17.42■□□□□ 0.38
ATRIP-208ENST00000639561 IL17REQ8NFR9 667 aa17.42■□□□□ 0.38
ATRIP-208ENST00000639561 DCAF5Q96JK2 942 aa17.42■□□□□ 0.38
ATRIP-208ENST00000639561 POLD1P28340 1107 aa17.41■□□□□ 0.38
ATRIP-208ENST00000639561 SIRT2Q8IXJ6 389 aa17.41■□□□□ 0.38
ATRIP-208ENST00000639561 FLAD1Q8NFF5 587 aa17.41■□□□□ 0.38
ATRIP-208ENST00000639561 ARXQ96QS3 562 aa17.41■□□□□ 0.38
ATRIP-208ENST00000639561 ERVV-2B6SEH9 535 aa17.4■□□□□ 0.38
ATRIP-208ENST00000639561 C1orf141Q5JVX7 400 aa17.4■□□□□ 0.38
ATRIP-208ENST00000639561 CHMP4BQ9H444 224 aaKnown RBP17.4■□□□□ 0.38
ATRIP-208ENST00000639561 INTS3Q68E01 1043 aaKnown RBP17.4■□□□□ 0.38
ATRIP-208ENST00000639561 ZNF831Q5JPB2 1677 aa17.4■□□□□ 0.38
ATRIP-208ENST00000639561 NUCB1Q02818 461 aa17.39■□□□□ 0.38
ATRIP-208ENST00000639561 SLC4A2P04920 1241 aa17.39■□□□□ 0.37
ATRIP-208ENST00000639561 DDRGK1Q96HY6 314 aa17.39■□□□□ 0.37
ATRIP-208ENST00000639561 UBR3Q6ZT12 1888 aa17.39■□□□□ 0.37
ATRIP-208ENST00000639561 PTPRCP08575 1304 aa17.38■□□□□ 0.37
ATRIP-208ENST00000639561 LOC102724428A0A0B4J2F2 783 aa17.38■□□□□ 0.37
ATRIP-208ENST00000639561 SIK1P57059 783 aa17.38■□□□□ 0.37
ATRIP-208ENST00000639561 AK7Q96M32 723 aa17.38■□□□□ 0.37
ATRIP-208ENST00000639561 FHDC1Q9C0D6 1143 aaPredicted RBP17.38■□□□□ 0.37
ATRIP-208ENST00000639561 SCN11AQ9UI33 1791 aa17.38■□□□□ 0.37
ATRIP-208ENST00000639561 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
ATRIP-208ENST00000639561 G2E3Q7L622 706 aa17.37■□□□□ 0.37
ATRIP-208ENST00000639561 COL23A1Q86Y22 540 aaPredicted RBP17.37■□□□□ 0.37
ATRIP-208ENST00000639561 SYT17Q9BSW7 474 aa17.37■□□□□ 0.37
ATRIP-208ENST00000639561 ASAP1Q9ULH1 1129 aa17.37■□□□□ 0.37
ATRIP-208ENST00000639561 LNPKQ9C0E8 428 aa17.36■□□□□ 0.37
ATRIP-208ENST00000639561 CEMIPQ8WUJ3 1361 aa17.36■□□□□ 0.37
ATRIP-208ENST00000639561 CABP4P57796 275 aa17.36■□□□□ 0.37
ATRIP-208ENST00000639561 ATG3Q9NT62 314 aa17.36■□□□□ 0.37
ATRIP-208ENST00000639561 CHD1LQ86WJ1 897 aa17.35■□□□□ 0.37
ATRIP-208ENST00000639561 TAF7Q15545 349 aaPredicted RBP17.35■□□□□ 0.37
ATRIP-208ENST00000639561 ATP10DQ9P241 1426 aa17.34■□□□□ 0.37
ATRIP-208ENST00000639561 ATP6V1AP38606 617 aa17.34■□□□□ 0.37
ATRIP-208ENST00000639561 GCC1Q96CN9 775 aa17.34■□□□□ 0.37
ATRIP-208ENST00000639561 SLC4A3P48751 1232 aa17.33■□□□□ 0.37
ATRIP-208ENST00000639561 AKAP4Q5JQC9 854 aa17.33■□□□□ 0.36
ATRIP-208ENST00000639561 LINC00116Q8NCU8 138 aa17.33■□□□□ 0.36
ATRIP-208ENST00000639561 BABAM1Q9NWV8 329 aa17.33■□□□□ 0.36
ATRIP-208ENST00000639561 COL5A3P25940 1745 aaPredicted RBP17.33■□□□□ 0.36
ATRIP-208ENST00000639561 SSFA2P28290 1259 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms