RNA–Protein interactions for RNA: ENST00000639548.1

PAX6-258, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-258ENST00000639548 LAMB4A4D0S4 1761 aa15.2■□□□□ 0.02
PAX6-258ENST00000639548 SHANK3Q9BYB0 1731 aa15.2■□□□□ 0.02
PAX6-258ENST00000639548 CHRNA2Q15822 529 aa15.19■□□□□ 0.02
PAX6-258ENST00000639548 MEIS3Q99687 375 aa15.19■□□□□ 0.02
PAX6-258ENST00000639548 C1orf115Q9H7X2 142 aa15.19■□□□□ 0.02
PAX6-258ENST00000639548 DBF4Q9UBU7 674 aaPredicted RBP15.19■□□□□ 0.02
PAX6-258ENST00000639548 C5P01031 1676 aa15.19■□□□□ 0.02
PAX6-258ENST00000639548 PAPPAQ13219 1627 aa15.18■□□□□ 0.02
PAX6-258ENST00000639548 BMP2KLQ5H9B9 411 aa15.18■□□□□ 0.02
PAX6-258ENST00000639548 UBR2Q8IWV8 1755 aa15.18■□□□□ 0.02
PAX6-258ENST00000639548 F6X3S4 739 aa15.17■□□□□ 0.02
PAX6-258ENST00000639548 GNAI2P04899 355 aa15.17■□□□□ 0.02
PAX6-258ENST00000639548 CARD10Q9BWT7 1032 aa15.17■□□□□ 0.02
PAX6-258ENST00000639548 ZBTB47Q9UFB7 747 aaPredicted RBP15.17■□□□□ 0.02
PAX6-258ENST00000639548 PCDH11XQ9BZA7 1347 aa15.17■□□□□ 0.02
PAX6-258ENST00000639548 PCDH11YQ9BZA8 1340 aa15.17■□□□□ 0.02
PAX6-258ENST00000639548 KCNQ3O43525 872 aa15.17■□□□□ 0.02
PAX6-258ENST00000639548 ANKRD45Q5TZF3 282 aa15.17■□□□□ 0.02
PAX6-258ENST00000639548 ZNF790Q6PG37 636 aa15.17■□□□□ 0.02
PAX6-258ENST00000639548 KRT27Q7Z3Y8 459 aa15.17■□□□□ 0.02
PAX6-258ENST00000639548 SPATA31A5Q5VU36 1347 aa15.16■□□□□ 0.02
PAX6-258ENST00000639548 SPATA31A7Q8IWB4 1347 aa15.16■□□□□ 0.02
PAX6-258ENST00000639548 CYP27B1O15528 508 aa15.16■□□□□ 0.02
PAX6-258ENST00000639548 EIF5BO60841 1220 aaKnown RBP15.16■□□□□ 0.02
PAX6-258ENST00000639548 FAM98CQ17RN3 349 aaKnown RBP15.16■□□□□ 0.02
PAX6-258ENST00000639548 SLC4A10Q6U841 1118 aa15.16■□□□□ 0.02
PAX6-258ENST00000639548 ANP32EQ9BTT0 268 aa15.16■□□□□ 0.02
PAX6-258ENST00000639548 LNPKQ9C0E8 428 aa15.16■□□□□ 0.02
PAX6-258ENST00000639548 UPF2Q9HAU5 1272 aaKnown RBP15.16■□□□□ 0.02
PAX6-258ENST00000639548 HYPKQ9NX55 129 aa15.16■□□□□ 0.02
PAX6-258ENST00000639548 CHPF2Q9P2E5 772 aa15.16■□□□□ 0.02
PAX6-258ENST00000639548 NKX1-1Q15270 411 aaPredicted RBP15.15■□□□□ 0.02
PAX6-258ENST00000639548 ERICH6Q7L0X2 663 aa15.15■□□□□ 0.02
PAX6-258ENST00000639548 NPM2Q86SE8 214 aaKnown RBP15.15■□□□□ 0.02
PAX6-258ENST00000639548 DNAAF4Q8WXU2 420 aa15.15■□□□□ 0.02
PAX6-258ENST00000639548 SRCIN1Q9C0H9 1055 aa15.14■□□□□ 0.01
PAX6-258ENST00000639548 PHAXQ9H814 394 aaKnown RBP15.14■□□□□ 0.01
PAX6-258ENST00000639548 DDX21Q9NR30 783 aaKnown RBP eCLIP15.14■□□□□ 0.01
PAX6-258ENST00000639548 ERVV-2B6SEH9 535 aa15.13■□□□□ 0.01
PAX6-258ENST00000639548 ALDH1L1O75891 902 aa15.13■□□□□ 0.01
PAX6-258ENST00000639548 EIF2S2P20042 333 aaKnown RBP15.13■□□□□ 0.01
PAX6-258ENST00000639548 ATP8B2P98198 1209 aa15.13■□□□□ 0.01
PAX6-258ENST00000639548 USP44Q9H0E7 712 aa15.13■□□□□ 0.01
PAX6-258ENST00000639548 WNK3Q9BYP7 1800 aa15.13■□□□□ 0.01
PAX6-258ENST00000639548 ADCY9O60503 1353 aa15.12■□□□□ 0.01
PAX6-258ENST00000639548 A0A0G2JS52 829 aa15.12■□□□□ 0.01
PAX6-258ENST00000639548 IL2RBP14784 551 aa15.12■□□□□ 0.01
PAX6-258ENST00000639548 MYT1Q01538 1121 aa15.12■□□□□ 0.01
PAX6-258ENST00000639548 BEND3Q5T5X7 828 aa15.12■□□□□ 0.01
PAX6-258ENST00000639548 TOM1L2Q6ZVM7 507 aa15.12■□□□□ 0.01
PAX6-258ENST00000639548 DEFB132Q7Z7B7 95 aa15.12■□□□□ 0.01
PAX6-258ENST00000639548 ZCRB1Q8TBF4 217 aaKnown RBP15.12■□□□□ 0.01
PAX6-258ENST00000639548 NECTIN2Q92692 538 aa15.12■□□□□ 0.01
PAX6-258ENST00000639548 TBC1D32Q96NH3 1257 aa15.12■□□□□ 0.01
PAX6-258ENST00000639548 HDAC5Q9UQL6 1122 aa15.12■□□□□ 0.01
PAX6-258ENST00000639548 THSD7AQ9UPZ6 1657 aa15.12■□□□□ 0.01
PAX6-258ENST00000639548 SF3B2Q13435 895 aaKnown RBP15.11■□□□□ 0.01
PAX6-258ENST00000639548 ERBB4Q15303 1308 aa15.11■□□□□ 0.01
PAX6-258ENST00000639548 SEC24BO95487 1268 aa15.1■□□□□ 0.01
PAX6-258ENST00000639548 DDX58O95786 925 aaKnown RBP15.1■□□□□ 0.01
PAX6-258ENST00000639548 UBTFL1P0CB47 393 aaPredicted RBP15.1■□□□□ 0.01
PAX6-258ENST00000639548 KSR2Q6VAB6 950 aa15.1■□□□□ 0.01
PAX6-258ENST00000639548 NFATC2IPQ8NCF5 419 aa15.1■□□□□ 0.01
PAX6-258ENST00000639548 FMNL2Q96PY5 1086 aa15.1■□□□□ 0.01
PAX6-258ENST00000639548 OSBPL3Q9H4L5 887 aa15.1■□□□□ 0.01
PAX6-258ENST00000639548 TUBGCP6Q96RT7 1819 aa15.1■□□□□ 0.01
PAX6-258ENST00000639548 SPATA31A1Q5TZJ5 1347 aa15.1■□□□□ 0.01
PAX6-258ENST00000639548 PI4KAP2A4QPH2 592 aa15.09■□□□□ 0.01
PAX6-258ENST00000639548 SNRPA1P09661 255 aaKnown RBP15.09■□□□□ 0.01
PAX6-258ENST00000639548 PLEKHM2Q8IWE5 1019 aa15.09■□□□□ 0.01
PAX6-258ENST00000639548 PI4KAP1Q8N8J0 262 aa15.09■□□□□ 0.01
PAX6-258ENST00000639548 SSH3Q8TE77 659 aa15.09■□□□□ 0.01
PAX6-258ENST00000639548 MTX1Q13505 466 aa15.09■□□□□ 0.01
PAX6-258ENST00000639548 POLA2Q14181 598 aa15.09■□□□□ 0.01
PAX6-258ENST00000639548 PDIA6Q15084 440 aa15.09■□□□□ 0.01
PAX6-258ENST00000639548 TTC5Q8N0Z6 440 aa15.09■□□□□ 0.01
PAX6-258ENST00000639548 UTYO14607 1347 aa15.08■□□□□ 0.01
PAX6-258ENST00000639548 DISP2A7MBM2 1401 aa15.08■□□□□ 0.01
PAX6-258ENST00000639548 TNS2Q63HR2 1409 aa15.08■□□□□ 0.01
PAX6-258ENST00000639548 CABP4P57796 275 aa15.08■□□□□ 0
PAX6-258ENST00000639548 KCPQ6ZWJ8 1503 aa15.07■□□□□ 0
PAX6-258ENST00000639548 TOGARAM1Q9Y4F4 1720 aa15.07■□□□□ 0
PAX6-258ENST00000639548 TTC22Q5TAA0 569 aa15.07■□□□□ 0
PAX6-258ENST00000639548 LINS1Q8NG48 757 aa15.07■□□□□ 0
PAX6-258ENST00000639548 ZNF496Q96IT1 587 aaPredicted RBP15.07■□□□□ 0
PAX6-258ENST00000639548 STRN4Q9NRL3 753 aa15.07■□□□□ 0
PAX6-258ENST00000639548 LRRFIP2Q9Y608 721 aaKnown RBP15.07■□□□□ 0
PAX6-258ENST00000639548 RAB11FIP3O75154 756 aa15.06■□□□□ 0
PAX6-258ENST00000639548 EVA1CP58658 441 aa15.06■□□□□ 0
PAX6-258ENST00000639548 LARP1Q6PKG0 1096 aaKnown RBP15.06■□□□□ 0
PAX6-258ENST00000639548 SALL3Q9BXA9 1300 aa15.06■□□□□ 0
PAX6-258ENST00000639548 ARFGEF2Q9Y6D5 1785 aa15.06■□□□□ 0
PAX6-258ENST00000639548 COL15A1P39059 1388 aa15.05■□□□□ -0
PAX6-258ENST00000639548 AOX1Q06278 1338 aa15.05■□□□□ -0
PAX6-258ENST00000639548 BAG6P46379 1132 aa15.05■□□□□ -0
PAX6-258ENST00000639548 RBM25P49756 843 aaKnown RBP15.05■□□□□ -0
PAX6-258ENST00000639548 SLC39A6Q13433 755 aa15.05■□□□□ -0
PAX6-258ENST00000639548 PROSER3Q2NL68 480 aa15.05■□□□□ -0
PAX6-258ENST00000639548 FAM182BQ5T319 152 aa15.05■□□□□ -0
PAX6-258ENST00000639548 BARGINQ6ZT62 677 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms