RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 MYL6BP14649 208 aa11.07□□□□□ -0.64
NECAP1-217ENST00000639276 RBM25P49756 843 aaKnown RBP11.07□□□□□ -0.64
NECAP1-217ENST00000639276 PDIA6Q15084 440 aa11.07□□□□□ -0.64
NECAP1-217ENST00000639276 ZNF496Q96IT1 587 aaPredicted RBP11.07□□□□□ -0.64
NECAP1-217ENST00000639276 IL1RAPL2Q9NP60 686 aa11.07□□□□□ -0.64
NECAP1-217ENST00000639276 SIPA1L3O60292 1781 aaPredicted RBP11.07□□□□□ -0.64
NECAP1-217ENST00000639276 PDE1AP54750 535 aa11.06□□□□□ -0.64
NECAP1-217ENST00000639276 SOS2Q07890 1332 aaPredicted RBP11.06□□□□□ -0.64
NECAP1-217ENST00000639276 TOM1L2Q6ZVM7 507 aa11.06□□□□□ -0.64
NECAP1-217ENST00000639276 LRRCC1Q9C099 1032 aa11.06□□□□□ -0.64
NECAP1-217ENST00000639276 USP16Q9Y5T5 823 aa11.06□□□□□ -0.64
NECAP1-217ENST00000639276 DEKP35659 375 aaKnown RBP11.05□□□□□ -0.64
NECAP1-217ENST00000639276 ANTXR1Q9H6X2 564 aa11.05□□□□□ -0.64
NECAP1-217ENST00000639276 STRN4Q9NRL3 753 aa11.05□□□□□ -0.64
NECAP1-217ENST00000639276 PXDNLA1KZ92 1463 aa11.05□□□□□ -0.64
NECAP1-217ENST00000639276 CPDO75976 1380 aa11.05□□□□□ -0.64
NECAP1-217ENST00000639276 OVOS2A0A0G2JMS6 1433 aa11.05□□□□□ -0.64
NECAP1-217ENST00000639276 SRGAP3O43295 1099 aa11.05□□□□□ -0.64
NECAP1-217ENST00000639276 CD2BP2O95400 341 aaKnown RBP11.05□□□□□ -0.64
NECAP1-217ENST00000639276 SSH3Q8TE77 659 aa11.05□□□□□ -0.64
NECAP1-217ENST00000639276 IBTKQ9P2D0 1353 aaPredicted RBP11.05□□□□□ -0.64
NECAP1-217ENST00000639276 SURF6O75683 361 aaKnown RBP11.05□□□□□ -0.64
NECAP1-217ENST00000639276 KSR2Q6VAB6 950 aa11.05□□□□□ -0.64
NECAP1-217ENST00000639276 FBXO41Q8TF61 875 aa11.05□□□□□ -0.64
NECAP1-217ENST00000639276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.05□□□□□ -0.64
NECAP1-217ENST00000639276 USP35Q9P2H5 1018 aa11.05□□□□□ -0.64
NECAP1-217ENST00000639276 ADAMTS7Q9UKP4 1686 aa11.04□□□□□ -0.64
NECAP1-217ENST00000639276 SCN11AQ9UI33 1791 aa11.04□□□□□ -0.64
NECAP1-217ENST00000639276 NUTM1Q86Y26 1132 aa11.04□□□□□ -0.64
NECAP1-217ENST00000639276 DCAF5Q96JK2 942 aa11.04□□□□□ -0.64
NECAP1-217ENST00000639276 SALL3Q9BXA9 1300 aa11.04□□□□□ -0.64
NECAP1-217ENST00000639276 LARP1Q6PKG0 1096 aaKnown RBP11.04□□□□□ -0.64
NECAP1-217ENST00000639276 DDX21Q9NR30 783 aaKnown RBP eCLIP11.04□□□□□ -0.64
NECAP1-217ENST00000639276 N4BP2Q86UW6 1770 aaPredicted RBP11.03□□□□□ -0.64
NECAP1-217ENST00000639276 EIF5BO60841 1220 aaKnown RBP11.03□□□□□ -0.64
NECAP1-217ENST00000639276 CABP4P57796 275 aa11.03□□□□□ -0.64
NECAP1-217ENST00000639276 POLA2Q14181 598 aa11.03□□□□□ -0.64
NECAP1-217ENST00000639276 HYPKQ9NX55 129 aa11.03□□□□□ -0.64
NECAP1-217ENST00000639276 C9orf78Q9NZ63 289 aaPredicted RBP11.03□□□□□ -0.64
NECAP1-217ENST00000639276 WDR17Q8IZU2 1322 aa11.03□□□□□ -0.64
NECAP1-217ENST00000639276 MX1P20591 662 aa11.03□□□□□ -0.64
NECAP1-217ENST00000639276 COPS6Q7L5N1 327 aa11.03□□□□□ -0.64
NECAP1-217ENST00000639276 UNC5CLQ8IV45 518 aa11.03□□□□□ -0.64
NECAP1-217ENST00000639276 DDX54Q8TDD1 881 aaKnown RBP11.03□□□□□ -0.64
NECAP1-217ENST00000639276 XAGE3Q8WTP9 111 aa11.03□□□□□ -0.64
NECAP1-217ENST00000639276 JARID2Q92833 1246 aaPredicted RBP11.03□□□□□ -0.64
NECAP1-217ENST00000639276 C5P01031 1676 aa11.03□□□□□ -0.64
NECAP1-217ENST00000639276 TTC5Q8N0Z6 440 aa11.02□□□□□ -0.65
NECAP1-217ENST00000639276 OSBPL3Q9H4L5 887 aa11.02□□□□□ -0.65
NECAP1-217ENST00000639276 PA2G4Q9UQ80 394 aaKnown RBP11.02□□□□□ -0.65
NECAP1-217ENST00000639276 MAP4K4O95819 1239 aaPredicted RBP11.02□□□□□ -0.65
NECAP1-217ENST00000639276 IGKV5-2P06315 115 aa11.02□□□□□ -0.65
NECAP1-217ENST00000639276 RIC3Q7Z5B4 369 aa11.02□□□□□ -0.65
NECAP1-217ENST00000639276 ZCRB1Q8TBF4 217 aaKnown RBP11.02□□□□□ -0.65
NECAP1-217ENST00000639276 USP26Q9BXU7 913 aa11.02□□□□□ -0.65
NECAP1-217ENST00000639276 CHMP4AQ9BY43 222 aa11.02□□□□□ -0.65
NECAP1-217ENST00000639276 RHPN1Q8TCX5 695 aa11.01□□□□□ -0.65
NECAP1-217ENST00000639276 RILPL2Q969X0 211 aa11.01□□□□□ -0.65
NECAP1-217ENST00000639276 KAZALD1Q96I82 304 aa11.01□□□□□ -0.65
NECAP1-217ENST00000639276 HSCBQ8IWL3 235 aa11.01□□□□□ -0.65
NECAP1-217ENST00000639276 SUCLG2Q96I99 432 aa11.01□□□□□ -0.65
NECAP1-217ENST00000639276 FOXD4L1Q9NU39 408 aa11.01□□□□□ -0.65
NECAP1-217ENST00000639276 COL5A2P05997 1499 aaPredicted RBP11□□□□□ -0.65
NECAP1-217ENST00000639276 TRIM6-TRIM34B2RNG4 842 aa11□□□□□ -0.65
NECAP1-217ENST00000639276 SNRPA1P09661 255 aaKnown RBP11□□□□□ -0.65
NECAP1-217ENST00000639276 EVA1CP58658 441 aa11□□□□□ -0.65
NECAP1-217ENST00000639276 LRP10Q7Z4F1 713 aa11□□□□□ -0.65
NECAP1-217ENST00000639276 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11□□□□□ -0.65
NECAP1-217ENST00000639276 LINS1Q8NG48 757 aa11□□□□□ -0.65
NECAP1-217ENST00000639276 MYD88Q99836 296 aa11□□□□□ -0.65
NECAP1-217ENST00000639276 GRM8O00222 908 aa10.99□□□□□ -0.65
NECAP1-217ENST00000639276 PTCD1O75127 700 aaKnown RBP10.99□□□□□ -0.65
NECAP1-217ENST00000639276 ALDH1L1O75891 902 aa10.99□□□□□ -0.65
NECAP1-217ENST00000639276 FMNL2Q96PY5 1086 aa10.99□□□□□ -0.65
NECAP1-217ENST00000639276 BICC1Q9H694 974 aaKnown RBP10.99□□□□□ -0.65
NECAP1-217ENST00000639276 PKD1L3Q7Z443 1732 aa10.99□□□□□ -0.65
NECAP1-217ENST00000639276 DDX58O95786 925 aaKnown RBP10.99□□□□□ -0.65
NECAP1-217ENST00000639276 IL2RBP14784 551 aa10.99□□□□□ -0.65
NECAP1-217ENST00000639276 ATP5J2-PTCD1G3V325 749 aa10.98□□□□□ -0.65
NECAP1-217ENST00000639276 HSP90AB1P08238 724 aaKnown RBP10.98□□□□□ -0.65
NECAP1-217ENST00000639276 KLHDC4Q8TBB5 520 aa10.98□□□□□ -0.65
NECAP1-217ENST00000639276 SNX21Q969T3 373 aa10.98□□□□□ -0.65
NECAP1-217ENST00000639276 IL25Q9H293 177 aa10.98□□□□□ -0.65
NECAP1-217ENST00000639276 STAP2Q9UGK3 403 aa10.98□□□□□ -0.65
NECAP1-217ENST00000639276 OS9Q13438 667 aaPredicted RBP10.98□□□□□ -0.65
NECAP1-217ENST00000639276 EPHA10Q5JZY3 1008 aa10.98□□□□□ -0.65
NECAP1-217ENST00000639276 ANKRD13DQ6ZTN6 518 aa10.98□□□□□ -0.65
NECAP1-217ENST00000639276 PCDH11XQ9BZA7 1347 aa10.97□□□□□ -0.65
NECAP1-217ENST00000639276 PCDH11YQ9BZA8 1340 aa10.97□□□□□ -0.65
NECAP1-217ENST00000639276 ABCC6O95255 1503 aa10.97□□□□□ -0.65
NECAP1-217ENST00000639276 NEURL1BA8MQ27 555 aa10.97□□□□□ -0.65
NECAP1-217ENST00000639276 NBPF26B4DH59 902 aa10.97□□□□□ -0.65
NECAP1-217ENST00000639276 RAB11FIP3O75154 756 aa10.97□□□□□ -0.65
NECAP1-217ENST00000639276 NBPF14Q5TI25 921 aa10.97□□□□□ -0.65
NECAP1-217ENST00000639276 NBPF10Q6P3W6 841 aaKnown RBP10.97□□□□□ -0.65
NECAP1-217ENST00000639276 CASC1Q6TDU7 716 aa10.97□□□□□ -0.65
NECAP1-217ENST00000639276 NBPF15Q8N660 670 aa10.97□□□□□ -0.65
NECAP1-217ENST00000639276 KIF1BPQ96EK5 621 aa10.97□□□□□ -0.65
NECAP1-217ENST00000639276 CARD10Q9BWT7 1032 aa10.97□□□□□ -0.65
NECAP1-217ENST00000639276 BTG4Q9NY30 223 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms