RNA–Protein interactions for RNA: ENST00000638984.1

ELP4-215, Transcript of elongator acetyltransferase complex subunit 4, human

TSL 5

Gene ELP4, Length 1,330 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ELP4-215	ENST00000638984	PHKG2	P15735	406 aa		13.11	□□□□□ -0.31
ELP4-215	ENST00000638984	FAM161A	Q3B820	660 aa		13.11	□□□□□ -0.31
ELP4-215	ENST00000638984	RC3H1	Q5TC82	1133 aa	Known RBP	13.11	□□□□□ -0.31
ELP4-215	ENST00000638984	KDM6A	O15550	1401 aa	Predicted RBP	13.1	□□□□□ -0.31
ELP4-215	ENST00000638984	MIER1	Q8N108	512 aa		13.1	□□□□□ -0.31
ELP4-215	ENST00000638984	PLCD3	Q8N3E9	789 aa		13.1	□□□□□ -0.31
ELP4-215	ENST00000638984	TESK2	Q96S53	571 aa		13.1	□□□□□ -0.31
ELP4-215	ENST00000638984	POTEI	P0CG38	1075 aa		13.09	□□□□□ -0.31
ELP4-215	ENST00000638984	POTEJ	P0CG39	1038 aa		13.09	□□□□□ -0.31
ELP4-215	ENST00000638984	PRKAR2A	P13861	404 aa	Known RBP	13.09	□□□□□ -0.31
ELP4-215	ENST00000638984	COL5A3	P25940	1745 aa	Predicted RBP	13.09	□□□□□ -0.31
ELP4-215	ENST00000638984	NCAPD2	Q15021	1401 aa		13.09	□□□□□ -0.31
ELP4-215	ENST00000638984	CHADL	Q6NUI6	762 aa		13.09	□□□□□ -0.31
ELP4-215	ENST00000638984	CNTNAP4	Q9C0A0	1308 aa		13.08	□□□□□ -0.31
ELP4-215	ENST00000638984	PPM1G	O15355	546 aa	Predicted RBP	13.08	□□□□□ -0.32
ELP4-215	ENST00000638984	LMNB1	P20700	586 aa		13.08	□□□□□ -0.32
ELP4-215	ENST00000638984	IFNL2	Q8IZJ0	200 aa		13.08	□□□□□ -0.32
ELP4-215	ENST00000638984	EYA1	Q99502	592 aa		13.08	□□□□□ -0.32
ELP4-215	ENST00000638984	CCDC88A	Q3V6T2	1871 aa		13.07	□□□□□ -0.32
ELP4-215	ENST00000638984	POLRMT	O00411	1230 aa	Known RBP	13.07	□□□□□ -0.32
ELP4-215	ENST00000638984	PRDM10	Q9NQV6	1147 aa		13.07	□□□□□ -0.32
ELP4-215	ENST00000638984	USP42	Q9H9J4	1324 aa	Known RBP	13.07	□□□□□ -0.32
ELP4-215	ENST00000638984	TONSL	Q96HA7	1378 aa		13.06	□□□□□ -0.32
ELP4-215	ENST00000638984	TIAM2	Q8IVF5	1701 aa		13.06	□□□□□ -0.32
ELP4-215	ENST00000638984	ST20-MTHFS	A0A0A6YYL1	179 aa		13.06	□□□□□ -0.32
ELP4-215	ENST00000638984	TM4SF1	P30408	202 aa		13.06	□□□□□ -0.32
ELP4-215	ENST00000638984	CRKL	P46109	303 aa	Known RBP	13.06	□□□□□ -0.32
ELP4-215	ENST00000638984	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.06	□□□□□ -0.32
ELP4-215	ENST00000638984	NFKBIE	O00221	500 aa		13.05	□□□□□ -0.32
ELP4-215	ENST00000638984	PTCD1	O75127	700 aa	Known RBP	13.05	□□□□□ -0.32
ELP4-215	ENST00000638984	LBX1	P52954	281 aa		13.05	□□□□□ -0.32
ELP4-215	ENST00000638984	ABHD8	Q96I13	439 aa		13.05	□□□□□ -0.32
ELP4-215	ENST00000638984	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.05	□□□□□ -0.32
ELP4-215	ENST00000638984	CTCF	P49711	727 aa	Predicted RBP	13.04	□□□□□ -0.32
ELP4-215	ENST00000638984	ZNF831	Q5JPB2	1677 aa		13.04	□□□□□ -0.32
ELP4-215	ENST00000638984	CNTNAP1	P78357	1384 aa		13.04	□□□□□ -0.32
ELP4-215	ENST00000638984	KIF24	Q5T7B8	1368 aa		13.04	□□□□□ -0.32
ELP4-215	ENST00000638984	VEGFB	P49765	207 aa		13.03	□□□□□ -0.32
ELP4-215	ENST00000638984	USPL1	Q5W0Q7	1092 aa		13.03	□□□□□ -0.32
ELP4-215	ENST00000638984	KIF20B	Q96Q89	1820 aa		13.02	□□□□□ -0.32
ELP4-215	ENST00000638984	ERVV-2	B6SEH9	535 aa		13.02	□□□□□ -0.33
ELP4-215	ENST00000638984	ADAMTS7	Q9UKP4	1686 aa		13.02	□□□□□ -0.33
ELP4-215	ENST00000638984	INTS5	Q6P9B9	1019 aa	Known RBP	13.01	□□□□□ -0.33
ELP4-215	ENST00000638984	TTLL6	Q8N841	843 aa		13.01	□□□□□ -0.33
ELP4-215	ENST00000638984	AIDA	Q96BJ3	306 aa		13.01	□□□□□ -0.33
ELP4-215	ENST00000638984	CARD14	Q9BXL6	1004 aa		13.01	□□□□□ -0.33
ELP4-215	ENST00000638984	WBP1L	Q9NX94	342 aa		13.01	□□□□□ -0.33
ELP4-215	ENST00000638984	PCDH10	Q9P2E7	1040 aa		13.01	□□□□□ -0.33
ELP4-215	ENST00000638984	AFDN	P55196	1824 aa	Known RBP	13.01	□□□□□ -0.33
ELP4-215	ENST00000638984	WASHC2A	Q641Q2	1341 aa		13	□□□□□ -0.33
ELP4-215	ENST00000638984	DDN	O94850	711 aa	Predicted RBP	13	□□□□□ -0.33
ELP4-215	ENST00000638984	NFIX	Q14938	502 aa		13	□□□□□ -0.33
ELP4-215	ENST00000638984	DPY19L2	Q6NUT2	758 aa		13	□□□□□ -0.33
ELP4-215	ENST00000638984	IFNLR1	Q8IU57	520 aa	Predicted RBP	13	□□□□□ -0.33
ELP4-215	ENST00000638984	CARMIL3	Q8ND23	1372 aa		12.99	□□□□□ -0.33
ELP4-215	ENST00000638984	PASK	Q96RG2	1323 aa		12.99	□□□□□ -0.33
ELP4-215	ENST00000638984	HSPA8	P11142	646 aa	Known RBP	12.99	□□□□□ -0.33
ELP4-215	ENST00000638984	MNX1	P50219	401 aa	Predicted RBP	12.99	□□□□□ -0.33
ELP4-215	ENST00000638984	CABP4	P57796	275 aa		12.99	□□□□□ -0.33
ELP4-215	ENST00000638984	C2CD5	Q86YS7	1000 aa		12.99	□□□□□ -0.33
ELP4-215	ENST00000638984	TJP1	Q07157	1748 aa		12.99	□□□□□ -0.33
ELP4-215	ENST00000638984	ERFE	Q4G0M1	354 aa		12.98	□□□□□ -0.33
ELP4-215	ENST00000638984	DLEC1	Q9Y238	1755 aa		12.98	□□□□□ -0.33
ELP4-215	ENST00000638984	VIRMA	Q69YN4	1812 aa	Known RBP	12.97	□□□□□ -0.33
ELP4-215	ENST00000638984	CCDC85C	A6NKD9	419 aa		12.97	□□□□□ -0.33
ELP4-215	ENST00000638984	C21orf2	O43822	256 aa		12.97	□□□□□ -0.33
ELP4-215	ENST00000638984	SLC24A1	O60721	1099 aa		12.97	□□□□□ -0.33
ELP4-215	ENST00000638984	ZPR1	O75312	459 aa		12.97	□□□□□ -0.33
ELP4-215	ENST00000638984	SERPINB2	P05120	415 aa		12.97	□□□□□ -0.33
ELP4-215	ENST00000638984	MLLT1	Q03111	559 aa	Predicted RBP	12.97	□□□□□ -0.33
ELP4-215	ENST00000638984	EIF4A2	Q14240	407 aa	Known RBP	12.97	□□□□□ -0.33
ELP4-215	ENST00000638984	NFATC2IP	Q8NCF5	419 aa		12.97	□□□□□ -0.33
ELP4-215	ENST00000638984	BCL2L12	Q9HB09	334 aa		12.97	□□□□□ -0.33
ELP4-215	ENST00000638984	TNRC18	O15417	2968 aa	Predicted RBP	12.97	□□□□□ -0.33
ELP4-215	ENST00000638984	ANKRD26	Q9UPS8	1709 aa		12.97	□□□□□ -0.33
ELP4-215	ENST00000638984	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.96	□□□□□ -0.33
ELP4-215	ENST00000638984	DNAJC10	Q8IXB1	793 aa		12.96	□□□□□ -0.33
ELP4-215	ENST00000638984	POLK	Q9UBT6	870 aa		12.96	□□□□□ -0.33
ELP4-215	ENST00000638984	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.96	□□□□□ -0.33
ELP4-215	ENST00000638984	NRXN2	Q9P2S2	1712 aa		12.96	□□□□□ -0.33
ELP4-215	ENST00000638984	SOS1	Q07889	1333 aa	Predicted RBP	12.95	□□□□□ -0.34
ELP4-215	ENST00000638984	TMEM88B	A6NKF7	163 aa		12.95	□□□□□ -0.34
ELP4-215	ENST00000638984		H0YIN7	160 aa		12.95	□□□□□ -0.34
ELP4-215	ENST00000638984	ITGBL1	O95965	494 aa	Predicted RBP	12.95	□□□□□ -0.34
ELP4-215	ENST00000638984	CCDC24	Q8N4L8	307 aa		12.95	□□□□□ -0.34
ELP4-215	ENST00000638984	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.95	□□□□□ -0.34
ELP4-215	ENST00000638984	DICER1	Q9UPY3	1922 aa	Known RBP	12.95	□□□□□ -0.34
ELP4-215	ENST00000638984	RGS19	P49795	217 aa		12.94	□□□□□ -0.34
ELP4-215	ENST00000638984	BICDL1	Q6ZP65	573 aa		12.94	□□□□□ -0.34
ELP4-215	ENST00000638984	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.94	□□□□□ -0.34
ELP4-215	ENST00000638984	FER1L6	Q2WGJ9	1857 aa		12.94	□□□□□ -0.34
ELP4-215	ENST00000638984	HSP90AB1	P08238	724 aa	Known RBP	12.93	□□□□□ -0.34
ELP4-215	ENST00000638984	TNNT2	P45379	298 aa	Predicted RBP	12.93	□□□□□ -0.34
ELP4-215	ENST00000638984	MTHFS	P49914	203 aa		12.93	□□□□□ -0.34
ELP4-215	ENST00000638984	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.93	□□□□□ -0.34
ELP4-215	ENST00000638984	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.93	□□□□□ -0.34
ELP4-215	ENST00000638984	NARF	Q9UHQ1	456 aa		12.93	□□□□□ -0.34
ELP4-215	ENST00000638984	LDHD	Q86WU2	507 aa		12.92	□□□□□ -0.34
ELP4-215	ENST00000638984	ANKRD31	Q8N7Z5	1873 aa		12.92	□□□□□ -0.34
ELP4-215	ENST00000638984	CYP19A1	P11511	503 aa	Predicted RBP	12.91	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms