RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 PWP2Q15269 919 aaKnown RBP8.63□□□□□ -1.03
NECAP1-213ENST00000638883 NGEFQ8N5V2 710 aa8.63□□□□□ -1.03
NECAP1-213ENST00000638883 PDZRN3Q9UPQ7 1066 aa8.63□□□□□ -1.03
NECAP1-213ENST00000638883 SYAP1Q96A49 352 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-213ENST00000638883 FOXD4L5Q5VV16 416 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-213ENST00000638883 FBXO31Q5XUX0 539 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-213ENST00000638883 KRT222Q8N1A0 295 aa8.62□□□□□ -1.03
NECAP1-213ENST00000638883 FOXD4L4Q8WXT5 416 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-213ENST00000638883 GTF2F1P35269 517 aaKnown RBP eCLIP8.62□□□□□ -1.03
NECAP1-213ENST00000638883 CABP2Q9NPB3 220 aa8.62□□□□□ -1.03
NECAP1-213ENST00000638883 GPHNQ9NQX3 736 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-213ENST00000638883 HSP90B1P14625 803 aaKnown RBP8.61□□□□□ -1.03
NECAP1-213ENST00000638883 AMHR2Q16671 573 aa8.61□□□□□ -1.03
NECAP1-213ENST00000638883 TEX35Q5T0J7 233 aa8.61□□□□□ -1.03
NECAP1-213ENST00000638883 ZNF710Q8N1W2 664 aa8.61□□□□□ -1.03
NECAP1-213ENST00000638883 PANK1Q8TE04 598 aa8.61□□□□□ -1.03
NECAP1-213ENST00000638883 ZNF592Q92610 1267 aa8.61□□□□□ -1.03
NECAP1-213ENST00000638883 NPC1L1Q9UHC9 1359 aa8.61□□□□□ -1.03
NECAP1-213ENST00000638883 PDE4DQ08499 809 aa8.61□□□□□ -1.03
NECAP1-213ENST00000638883 AK7Q96M32 723 aa8.61□□□□□ -1.03
NECAP1-213ENST00000638883 BCAR3O75815 825 aa8.61□□□□□ -1.03
NECAP1-213ENST00000638883 BAG4O95429 457 aaKnown RBP8.61□□□□□ -1.03
NECAP1-213ENST00000638883 RAB3GAP1Q15042 981 aa8.61□□□□□ -1.03
NECAP1-213ENST00000638883 LARP6Q9BRS8 491 aaKnown RBP8.61□□□□□ -1.03
NECAP1-213ENST00000638883 RASSF4Q9H2L5 321 aa8.61□□□□□ -1.03
NECAP1-213ENST00000638883 C17orf53Q8N3J3 647 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-213ENST00000638883 NUCB2P80303 420 aa8.6□□□□□ -1.03
NECAP1-213ENST00000638883 DRC7Q8IY82 874 aa8.6□□□□□ -1.03
NECAP1-213ENST00000638883 DDX27Q96GQ7 796 aaKnown RBP8.6□□□□□ -1.03
NECAP1-213ENST00000638883 TTC12Q9H892 705 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-213ENST00000638883 ADAMTS8Q9UP79 889 aa8.6□□□□□ -1.03
NECAP1-213ENST00000638883 ITGB4P16144 1822 aa8.6□□□□□ -1.03
NECAP1-213ENST00000638883 FAM135BQ49AJ0 1406 aa8.6□□□□□ -1.03
NECAP1-213ENST00000638883 NINLQ9Y2I6 1382 aa8.6□□□□□ -1.03
NECAP1-213ENST00000638883 GGT6Q6P531 493 aa8.6□□□□□ -1.03
NECAP1-213ENST00000638883 PDCD7Q8N8D1 485 aaKnown RBP8.6□□□□□ -1.03
NECAP1-213ENST00000638883 MYCBPQ99417 103 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-213ENST00000638883 DEF6Q9H4E7 631 aa8.6□□□□□ -1.03
NECAP1-213ENST00000638883 RBM27Q9P2N5 1060 aaKnown RBP8.6□□□□□ -1.03
NECAP1-213ENST00000638883 SLC20A2Q08357 652 aa8.6□□□□□ -1.03
NECAP1-213ENST00000638883 C10orf67Q8IYJ2 551 aa8.6□□□□□ -1.03
NECAP1-213ENST00000638883 TSPY26PQ9H489 355 aa8.6□□□□□ -1.03
NECAP1-213ENST00000638883 EFCC1Q9HA90 598 aa8.6□□□□□ -1.03
NECAP1-213ENST00000638883 ZNF445P59923 1031 aa8.59□□□□□ -1.03
NECAP1-213ENST00000638883 SRPK2P78362 688 aaKnown RBP8.59□□□□□ -1.03
NECAP1-213ENST00000638883 U2SURPO15042 1029 aaKnown RBP8.59□□□□□ -1.03
NECAP1-213ENST00000638883 HTATSF1O43719 755 aaKnown RBP8.59□□□□□ -1.03
NECAP1-213ENST00000638883 OSBPP22059 807 aa8.59□□□□□ -1.04
NECAP1-213ENST00000638883 GPS2Q13227 327 aa8.59□□□□□ -1.04
NECAP1-213ENST00000638883 NOM1Q5C9Z4 860 aaKnown RBP8.59□□□□□ -1.04
NECAP1-213ENST00000638883 PIBF1Q8WXW3 757 aa8.59□□□□□ -1.04
NECAP1-213ENST00000638883 REPIN1Q9BWE0 567 aaKnown RBP8.59□□□□□ -1.04
NECAP1-213ENST00000638883 PHF14O94880 888 aa8.58□□□□□ -1.04
NECAP1-213ENST00000638883 CTR9Q6PD62 1173 aa8.58□□□□□ -1.04
NECAP1-213ENST00000638883 LAMB2P55268 1798 aa8.58□□□□□ -1.04
NECAP1-213ENST00000638883 FECHP22830 423 aa8.58□□□□□ -1.04
NECAP1-213ENST00000638883 CCDC112Q8NEF3 446 aa8.58□□□□□ -1.04
NECAP1-213ENST00000638883 CWC15Q9P013 229 aaKnown RBP8.58□□□□□ -1.04
NECAP1-213ENST00000638883 CACNA1FO60840 1977 aa8.58□□□□□ -1.04
NECAP1-213ENST00000638883 K7ELQ4 463 aaPredicted RBP8.58□□□□□ -1.04
NECAP1-213ENST00000638883 NPHP1O15259 732 aa8.58□□□□□ -1.04
NECAP1-213ENST00000638883 TERF2Q15554 542 aa8.58□□□□□ -1.04
NECAP1-213ENST00000638883 FNBP4Q8N3X1 1017 aaPredicted RBP8.58□□□□□ -1.04
NECAP1-213ENST00000638883 NOL10Q9BSC4 688 aaKnown RBP8.58□□□□□ -1.04
NECAP1-213ENST00000638883 GEMIN8Q9NWZ8 242 aaKnown RBP8.58□□□□□ -1.04
NECAP1-213ENST00000638883 AHDC1Q5TGY3 1603 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-213ENST00000638883 QSER1Q2KHR3 1735 aa8.57□□□□□ -1.04
NECAP1-213ENST00000638883 ANKRD36CQ5JPF3 1778 aa8.57□□□□□ -1.04
NECAP1-213ENST00000638883 EIF3AQ14152 1382 aaKnown RBP8.57□□□□□ -1.04
NECAP1-213ENST00000638883 PLEKHH1Q9ULM0 1364 aa8.57□□□□□ -1.04
NECAP1-213ENST00000638883 IFT57Q9NWB7 429 aa8.57□□□□□ -1.04
NECAP1-213ENST00000638883 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.57□□□□□ -1.04
NECAP1-213ENST00000638883 NWD2Q9ULI1 1742 aa8.57□□□□□ -1.04
NECAP1-213ENST00000638883 BCORQ6W2J9 1755 aa8.57□□□□□ -1.04
NECAP1-213ENST00000638883 TAF1LQ8IZX4 1826 aa8.57□□□□□ -1.04
NECAP1-213ENST00000638883 CACNB1Q02641 598 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-213ENST00000638883 LRSAM1Q6UWE0 723 aa8.57□□□□□ -1.04
NECAP1-213ENST00000638883 SMC5Q8IY18 1101 aa8.57□□□□□ -1.04
NECAP1-213ENST00000638883 PDLIM2Q96JY6 352 aa8.57□□□□□ -1.04
NECAP1-213ENST00000638883 USP25Q9UHP3 1055 aa8.57□□□□□ -1.04
NECAP1-213ENST00000638883 FOXD4L6Q3SYB3 417 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-213ENST00000638883 FOXD4L3Q6VB84 417 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-213ENST00000638883 WDR70Q9NW82 654 aa8.56□□□□□ -1.04
NECAP1-213ENST00000638883 SMC4Q9NTJ3 1288 aa8.56□□□□□ -1.04
NECAP1-213ENST00000638883 KCNG1Q9UIX4 513 aa8.56□□□□□ -1.04
NECAP1-213ENST00000638883 RGPD3A6NKT7 1758 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-213ENST00000638883 RGPD4Q7Z3J3 1758 aa8.56□□□□□ -1.04
NECAP1-213ENST00000638883 THSD7AQ9UPZ6 1657 aa8.56□□□□□ -1.04
NECAP1-213ENST00000638883 LY75O60449 1722 aa8.56□□□□□ -1.04
NECAP1-213ENST00000638883 DSG2Q14126 1118 aa8.56□□□□□ -1.04
NECAP1-213ENST00000638883 CCDC146Q8IYE0 955 aa8.56□□□□□ -1.04
NECAP1-213ENST00000638883 SPC24Q8NBT2 197 aa8.56□□□□□ -1.04
NECAP1-213ENST00000638883 PXDNQ92626 1479 aa8.56□□□□□ -1.04
NECAP1-213ENST00000638883 MBD3O95983 291 aa8.55□□□□□ -1.04
NECAP1-213ENST00000638883 PPP2R1AP30153 589 aa8.55□□□□□ -1.04
NECAP1-213ENST00000638883 PTGER2P43116 358 aa8.55□□□□□ -1.04
NECAP1-213ENST00000638883 TMF1P82094 1093 aa8.55□□□□□ -1.04
NECAP1-213ENST00000638883 PIP4P2Q8N4L2 257 aa8.55□□□□□ -1.04
NECAP1-213ENST00000638883 KIF16BQ96L93 1317 aa8.55□□□□□ -1.04
NECAP1-213ENST00000638883 SLFN14P0C7P3 912 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms