RNA–Protein interactions for RNA: ENST00000638878.1

PAX6-242, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-242ENST00000638878 SSFA2P28290 1259 aa12.79□□□□□ -0.36
PAX6-242ENST00000638878 DEKP35659 375 aaKnown RBP12.79□□□□□ -0.36
PAX6-242ENST00000638878 KCNQ4P56696 695 aa12.79□□□□□ -0.36
PAX6-242ENST00000638878 ITPK1Q13572 414 aa12.79□□□□□ -0.36
PAX6-242ENST00000638878 MCM10Q7L590 875 aa12.79□□□□□ -0.36
PAX6-242ENST00000638878 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
PAX6-242ENST00000638878 CNTNAP4Q9C0A0 1308 aa12.79□□□□□ -0.36
PAX6-242ENST00000638878 QSER1Q2KHR3 1735 aa12.78□□□□□ -0.36
PAX6-242ENST00000638878 TCERG1O14776 1098 aaKnown RBP12.78□□□□□ -0.36
PAX6-242ENST00000638878 MS4A1P11836 297 aa12.78□□□□□ -0.36
PAX6-242ENST00000638878 TTC5Q8N0Z6 440 aa12.78□□□□□ -0.36
PAX6-242ENST00000638878 MTFR1LQ9H019 292 aa12.78□□□□□ -0.36
PAX6-242ENST00000638878 SPON1Q9HCB6 807 aa12.78□□□□□ -0.36
PAX6-242ENST00000638878 ZBTB47Q9UFB7 747 aaPredicted RBP12.78□□□□□ -0.36
PAX6-242ENST00000638878 SIPA1L3O60292 1781 aaPredicted RBP12.77□□□□□ -0.37
PAX6-242ENST00000638878 RPS6KA4O75676 772 aa12.77□□□□□ -0.37
PAX6-242ENST00000638878 C5P01031 1676 aa12.77□□□□□ -0.37
PAX6-242ENST00000638878 SLC39A6Q13433 755 aa12.77□□□□□ -0.37
PAX6-242ENST00000638878 PNPLA7Q6ZV29 1317 aa12.77□□□□□ -0.37
PAX6-242ENST00000638878 TAF1LQ8IZX4 1826 aa12.77□□□□□ -0.37
PAX6-242ENST00000638878 NGEFQ8N5V2 710 aa12.77□□□□□ -0.37
PAX6-242ENST00000638878 LINC00116Q8NCU8 138 aa12.77□□□□□ -0.37
PAX6-242ENST00000638878 FMNL2Q96PY5 1086 aa12.77□□□□□ -0.37
PAX6-242ENST00000638878 CYP19A1P11511 503 aaPredicted RBP12.76□□□□□ -0.37
PAX6-242ENST00000638878 CCDC27Q2M243 656 aa12.76□□□□□ -0.37
PAX6-242ENST00000638878 ZNF496Q96IT1 587 aaPredicted RBP12.76□□□□□ -0.37
PAX6-242ENST00000638878 AK7Q96M32 723 aa12.76□□□□□ -0.37
PAX6-242ENST00000638878 TRIM35Q9UPQ4 493 aa12.76□□□□□ -0.37
PAX6-242ENST00000638878 C4BP0C0L5 1744 aa12.75□□□□□ -0.37
PAX6-242ENST00000638878 KCPQ6ZWJ8 1503 aa12.75□□□□□ -0.37
PAX6-242ENST00000638878 HEG1Q9ULI3 1381 aa12.75□□□□□ -0.37
PAX6-242ENST00000638878 STARD3NLO95772 234 aa12.75□□□□□ -0.37
PAX6-242ENST00000638878 YY1P25490 414 aa12.75□□□□□ -0.37
PAX6-242ENST00000638878 DCTN1Q14203 1278 aa12.75□□□□□ -0.37
PAX6-242ENST00000638878 COL23A1Q86Y22 540 aaPredicted RBP12.75□□□□□ -0.37
PAX6-242ENST00000638878 RTCBQ9Y3I0 505 aaKnown RBP12.75□□□□□ -0.37
PAX6-242ENST00000638878 VIRMAQ69YN4 1812 aaKnown RBP12.75□□□□□ -0.37
PAX6-242ENST00000638878 CASZ1Q86V15 1759 aa12.75□□□□□ -0.37
PAX6-242ENST00000638878 UBR2Q8IWV8 1755 aa12.74□□□□□ -0.37
PAX6-242ENST00000638878 CRKLP46109 303 aaKnown RBP12.74□□□□□ -0.37
PAX6-242ENST00000638878 CALD1Q05682 793 aaKnown RBP12.74□□□□□ -0.37
PAX6-242ENST00000638878 TRAPPC3LQ5T215 181 aa12.74□□□□□ -0.37
PAX6-242ENST00000638878 INTS5Q6P9B9 1019 aaKnown RBP12.74□□□□□ -0.37
PAX6-242ENST00000638878 SGIP1Q9BQI5 828 aa12.74□□□□□ -0.37
PAX6-242ENST00000638878 PDGFDQ9GZP0 370 aaPredicted RBP12.74□□□□□ -0.37
PAX6-242ENST00000638878 CHL1O00533 1208 aa12.73□□□□□ -0.37
PAX6-242ENST00000638878 APAF1O14727 1248 aa12.73□□□□□ -0.37
PAX6-242ENST00000638878 SNRPA1P09661 255 aaKnown RBP12.73□□□□□ -0.37
PAX6-242ENST00000638878 CCDC146Q8IYE0 955 aa12.73□□□□□ -0.37
PAX6-242ENST00000638878 DLG5Q8TDM6 1919 aa12.73□□□□□ -0.37
PAX6-242ENST00000638878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.72□□□□□ -0.37
PAX6-242ENST00000638878 GNPATO15228 680 aa12.72□□□□□ -0.37
PAX6-242ENST00000638878 PTGER2P43116 358 aa12.72□□□□□ -0.37
PAX6-242ENST00000638878 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
PAX6-242ENST00000638878 NBR1Q14596 966 aa12.72□□□□□ -0.37
PAX6-242ENST00000638878 RTL5Q5HYW3 569 aaPredicted RBP12.72□□□□□ -0.37
PAX6-242ENST00000638878 DNAJC10Q8IXB1 793 aa12.72□□□□□ -0.37
PAX6-242ENST00000638878 CCDC87Q9NVE4 849 aa12.72□□□□□ -0.37
PAX6-242ENST00000638878 COL5A3P25940 1745 aaPredicted RBP12.72□□□□□ -0.37
PAX6-242ENST00000638878 EIF4A1P60842 406 aaKnown RBP12.71□□□□□ -0.37
PAX6-242ENST00000638878 ARHGEF1Q92888 912 aaKnown RBP12.71□□□□□ -0.37
PAX6-242ENST00000638878 COL24A1Q17RW2 1714 aa12.71□□□□□ -0.38
PAX6-242ENST00000638878 KCNQ3O43525 872 aa12.7□□□□□ -0.38
PAX6-242ENST00000638878 GIGYF1O75420 1035 aaPredicted RBP12.7□□□□□ -0.38
PAX6-242ENST00000638878 ZNF853P0CG23 659 aa12.7□□□□□ -0.38
PAX6-242ENST00000638878 NLGN1Q8N2Q7 840 aa12.7□□□□□ -0.38
PAX6-242ENST00000638878 UBR3Q6ZT12 1888 aa12.7□□□□□ -0.38
PAX6-242ENST00000638878 RGL2O15211 777 aa12.69□□□□□ -0.38
PAX6-242ENST00000638878 ZBTB7AO95365 584 aa12.69□□□□□ -0.38
PAX6-242ENST00000638878 IL6STP40189 918 aaPredicted RBP12.69□□□□□ -0.38
PAX6-242ENST00000638878 EIF5P55010 431 aaKnown RBP12.69□□□□□ -0.38
PAX6-242ENST00000638878 NEUROD2Q15784 382 aa12.69□□□□□ -0.38
PAX6-242ENST00000638878 AMIGO3Q86WK7 504 aa12.69□□□□□ -0.38
PAX6-242ENST00000638878 THUMPD2Q9BTF0 503 aaKnown RBP12.69□□□□□ -0.38
PAX6-242ENST00000638878 RRP7AQ9Y3A4 280 aaKnown RBP12.69□□□□□ -0.38
PAX6-242ENST00000638878 TJP1Q07157 1748 aa12.69□□□□□ -0.38
PAX6-242ENST00000638878 RFC4P35249 363 aa12.69□□□□□ -0.38
PAX6-242ENST00000638878 MIS18AQ9NYP9 233 aa12.69□□□□□ -0.38
PAX6-242ENST00000638878 TSPYL4Q9UJ04 414 aa12.69□□□□□ -0.38
PAX6-242ENST00000638878 RCAN3Q9UKA8 241 aa12.69□□□□□ -0.38
PAX6-242ENST00000638878 USP16Q9Y5T5 823 aa12.69□□□□□ -0.38
PAX6-242ENST00000638878 SOS1Q07889 1333 aaPredicted RBP12.68□□□□□ -0.38
PAX6-242ENST00000638878 IL16Q14005 1332 aa12.68□□□□□ -0.38
PAX6-242ENST00000638878 A0A087WZG4 1122 aa12.68□□□□□ -0.38
PAX6-242ENST00000638878 POLD1P28340 1107 aa12.68□□□□□ -0.38
PAX6-242ENST00000638878 WWC1Q8IX03 1113 aa12.68□□□□□ -0.38
PAX6-242ENST00000638878 CHMP4AQ9BY43 222 aa12.68□□□□□ -0.38
PAX6-242ENST00000638878 IFT57Q9NWB7 429 aa12.68□□□□□ -0.38
PAX6-242ENST00000638878 ERBB4Q15303 1308 aa12.67□□□□□ -0.38
PAX6-242ENST00000638878 MYH14Q7Z406 1995 aaKnown RBP12.67□□□□□ -0.38
PAX6-242ENST00000638878 HOXB7P09629 217 aa12.67□□□□□ -0.38
PAX6-242ENST00000638878 GNAI1P63096 354 aa12.67□□□□□ -0.38
PAX6-242ENST00000638878 WDR63Q8IWG1 891 aa12.67□□□□□ -0.38
PAX6-242ENST00000638878 SPRYD3Q8NCJ5 442 aa12.67□□□□□ -0.38
PAX6-242ENST00000638878 TUBGCP6Q96RT7 1819 aa12.66□□□□□ -0.38
PAX6-242ENST00000638878 DCAF8L1A6NGE4 600 aa12.66□□□□□ -0.38
PAX6-242ENST00000638878 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
PAX6-242ENST00000638878 PHF14O94880 888 aa12.66□□□□□ -0.38
PAX6-242ENST00000638878 GYS1P13807 737 aa12.66□□□□□ -0.38
PAX6-242ENST00000638878 DDRGK1Q96HY6 314 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms