RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 TSPOAP1O95153 1857 aa13.18□□□□□ -0.3
SNIP1-204ENST00000638725 AMPHP49418 695 aa13.18□□□□□ -0.3
SNIP1-204ENST00000638725 HDGFP51858 240 aaKnown RBP13.18□□□□□ -0.3
SNIP1-204ENST00000638725 DYNC1I1O14576 645 aa13.17□□□□□ -0.3
SNIP1-204ENST00000638725 PLEKHG5O94827 1062 aa13.17□□□□□ -0.3
SNIP1-204ENST00000638725 SSH3Q8TE77 659 aa13.17□□□□□ -0.3
SNIP1-204ENST00000638725 ZNF830Q96NB3 372 aaPredicted RBP13.17□□□□□ -0.3
SNIP1-204ENST00000638725 SNX14Q9Y5W7 946 aa13.17□□□□□ -0.3
SNIP1-204ENST00000638725 RAD50Q92878 1312 aa13.17□□□□□ -0.3
SNIP1-204ENST00000638725 SURF6O75683 361 aaKnown RBP13.17□□□□□ -0.3
SNIP1-204ENST00000638725 MAP7D2Q96T17 732 aa13.17□□□□□ -0.3
SNIP1-204ENST00000638725 ARID3AQ99856 593 aa13.17□□□□□ -0.3
SNIP1-204ENST00000638725 ADAMTS13Q76LX8 1427 aa13.17□□□□□ -0.3
SNIP1-204ENST00000638725 SGSM2O43147 1006 aa13.16□□□□□ -0.3
SNIP1-204ENST00000638725 TMEM87AQ8NBN3 555 aa13.16□□□□□ -0.3
SNIP1-204ENST00000638725 PI4K2BQ8TCG2 481 aa13.16□□□□□ -0.3
SNIP1-204ENST00000638725 PHAXQ9H814 394 aaKnown RBP13.16□□□□□ -0.3
SNIP1-204ENST00000638725 LRRC37A3O60309 1634 aa13.16□□□□□ -0.3
SNIP1-204ENST00000638725 GNAT3A8MTJ3 354 aa13.16□□□□□ -0.3
SNIP1-204ENST00000638725 AK2P54819 239 aa13.16□□□□□ -0.3
SNIP1-204ENST00000638725 CCDC183Q5T5S1 534 aa13.16□□□□□ -0.3
SNIP1-204ENST00000638725 PPP1R42Q7Z4L9 355 aa13.16□□□□□ -0.3
SNIP1-204ENST00000638725 RASEFQ8IZ41 740 aa13.16□□□□□ -0.3
SNIP1-204ENST00000638725 TTC14Q96N46 770 aa13.16□□□□□ -0.3
SNIP1-204ENST00000638725 EPB41L2O43491 1005 aaKnown RBP13.15□□□□□ -0.3
SNIP1-204ENST00000638725 DTNBO60941 627 aa13.15□□□□□ -0.3
SNIP1-204ENST00000638725 ZSCAN22P10073 491 aaPredicted RBP13.15□□□□□ -0.3
SNIP1-204ENST00000638725 HCLS1P14317 486 aaPredicted RBP13.15□□□□□ -0.3
SNIP1-204ENST00000638725 FAM184AQ8NB25 1140 aa13.15□□□□□ -0.3
SNIP1-204ENST00000638725 RHPN1Q8TCX5 695 aa13.15□□□□□ -0.3
SNIP1-204ENST00000638725 TMEM2Q9UHN6 1383 aa13.15□□□□□ -0.3
SNIP1-204ENST00000638725 UVSSAQ2YD98 709 aa13.15□□□□□ -0.3
SNIP1-204ENST00000638725 CYB5RLQ6IPT4 315 aa13.15□□□□□ -0.3
SNIP1-204ENST00000638725 IL17REQ8NFR9 667 aa13.15□□□□□ -0.3
SNIP1-204ENST00000638725 LSG1Q9H089 658 aaKnown RBP13.15□□□□□ -0.3
SNIP1-204ENST00000638725 ESF1Q9H501 851 aaKnown RBP13.15□□□□□ -0.3
SNIP1-204ENST00000638725 HTATSF1O43719 755 aaKnown RBP13.15□□□□□ -0.31
SNIP1-204ENST00000638725 CPA1P15085 419 aa13.15□□□□□ -0.31
SNIP1-204ENST00000638725 SYT1P21579 422 aa13.15□□□□□ -0.31
SNIP1-204ENST00000638725 DNTTIP2Q5QJE6 756 aaKnown RBP13.15□□□□□ -0.31
SNIP1-204ENST00000638725 RUFY3Q7L099 469 aa13.15□□□□□ -0.31
SNIP1-204ENST00000638725 TTC21AQ8NDW8 1320 aa13.14□□□□□ -0.31
SNIP1-204ENST00000638725 PXDNLA1KZ92 1463 aa13.14□□□□□ -0.31
SNIP1-204ENST00000638725 FIBPO43427 364 aa13.14□□□□□ -0.31
SNIP1-204ENST00000638725 STX6O43752 255 aa13.14□□□□□ -0.31
SNIP1-204ENST00000638725 ADCY5O95622 1261 aa13.14□□□□□ -0.31
SNIP1-204ENST00000638725 TTC12Q9H892 705 aaPredicted RBP13.14□□□□□ -0.31
SNIP1-204ENST00000638725 RAB11FIP3O75154 756 aa13.14□□□□□ -0.31
SNIP1-204ENST00000638725 LARGE1O95461 756 aa13.14□□□□□ -0.31
SNIP1-204ENST00000638725 POLA2Q14181 598 aa13.14□□□□□ -0.31
SNIP1-204ENST00000638725 HDGFL1Q5TGJ6 251 aa13.14□□□□□ -0.31
SNIP1-204ENST00000638725 CWC27Q6UX04 472 aaKnown RBP13.14□□□□□ -0.31
SNIP1-204ENST00000638725 SPG7Q9UQ90 795 aa13.14□□□□□ -0.31
SNIP1-204ENST00000638725 N4BP2Q86UW6 1770 aaPredicted RBP13.13□□□□□ -0.31
SNIP1-204ENST00000638725 SRGAP3O43295 1099 aa13.13□□□□□ -0.31
SNIP1-204ENST00000638725 C17orf53Q8N3J3 647 aaPredicted RBP13.13□□□□□ -0.31
SNIP1-204ENST00000638725 JARID2Q92833 1246 aaPredicted RBP13.13□□□□□ -0.31
SNIP1-204ENST00000638725 LIMCH1Q9UPQ0 1083 aa13.13□□□□□ -0.31
SNIP1-204ENST00000638725 TNRQ92752 1358 aa13.13□□□□□ -0.31
SNIP1-204ENST00000638725 F13A1P00488 732 aa13.13□□□□□ -0.31
SNIP1-204ENST00000638725 UBE2HP62256 183 aa13.13□□□□□ -0.31
SNIP1-204ENST00000638725 CNTROBQ8N137 903 aa13.13□□□□□ -0.31
SNIP1-204ENST00000638725 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
SNIP1-204ENST00000638725 SMC3Q9UQE7 1217 aa13.13□□□□□ -0.31
SNIP1-204ENST00000638725 NBPF7P0C2Y1 421 aaPredicted RBP13.12□□□□□ -0.31
SNIP1-204ENST00000638725 TAF7Q15545 349 aaPredicted RBP13.12□□□□□ -0.31
SNIP1-204ENST00000638725 NGDNQ8NEJ9 315 aaKnown RBP13.12□□□□□ -0.31
SNIP1-204ENST00000638725 KIF1BPQ96EK5 621 aa13.12□□□□□ -0.31
SNIP1-204ENST00000638725 MAP3K5Q99683 1374 aa13.12□□□□□ -0.31
SNIP1-204ENST00000638725 DIP2BQ9P265 1576 aa13.12□□□□□ -0.31
SNIP1-204ENST00000638725 SLC26A8Q96RN1 970 aa13.12□□□□□ -0.31
SNIP1-204ENST00000638725 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.12□□□□□ -0.31
SNIP1-204ENST00000638725 PTPRUQ92729 1446 aa13.11□□□□□ -0.31
SNIP1-204ENST00000638725 CACNA1FO60840 1977 aa13.11□□□□□ -0.31
SNIP1-204ENST00000638725 CASTP20810 708 aaKnown RBP13.11□□□□□ -0.31
SNIP1-204ENST00000638725 LTKP29376 864 aa13.11□□□□□ -0.31
SNIP1-204ENST00000638725 NOLC1Q14978 699 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNIP1-204ENST00000638725 NUTM2GQ5VZR2 741 aa13.11□□□□□ -0.31
SNIP1-204ENST00000638725 GIMAP6Q6P9H5 292 aa13.11□□□□□ -0.31
SNIP1-204ENST00000638725 CCDC83Q8IWF9 413 aa13.11□□□□□ -0.31
SNIP1-204ENST00000638725 MYRIPQ8NFW9 859 aa13.11□□□□□ -0.31
SNIP1-204ENST00000638725 LTV1Q96GA3 475 aaPredicted RBP13.11□□□□□ -0.31
SNIP1-204ENST00000638725 EIF2S2P20042 333 aaKnown RBP13.11□□□□□ -0.31
SNIP1-204ENST00000638725 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
SNIP1-204ENST00000638725 TSC1Q92574 1164 aa13.11□□□□□ -0.31
SNIP1-204ENST00000638725 UBR1Q8IWV7 1749 aa13.11□□□□□ -0.31
SNIP1-204ENST00000638725 LETM1O95202 739 aaPredicted RBP13.1□□□□□ -0.31
SNIP1-204ENST00000638725 MTERF4Q7Z6M4 381 aaKnown RBP13.1□□□□□ -0.31
SNIP1-204ENST00000638725 GJB2P29033 226 aa13.1□□□□□ -0.31
SNIP1-204ENST00000638725 HOXC9P31274 260 aa13.1□□□□□ -0.31
SNIP1-204ENST00000638725 NLRP6P59044 892 aa13.1□□□□□ -0.31
SNIP1-204ENST00000638725 DNM1Q05193 864 aaKnown RBP13.1□□□□□ -0.31
SNIP1-204ENST00000638725 FUCA2Q9BTY2 467 aa13.1□□□□□ -0.31
SNIP1-204ENST00000638725 KDM4AO75164 1064 aa13.09□□□□□ -0.31
SNIP1-204ENST00000638725 ADCK5Q3MIX3 580 aa13.09□□□□□ -0.31
SNIP1-204ENST00000638725 USHBP1Q8N6Y0 703 aa13.09□□□□□ -0.31
SNIP1-204ENST00000638725 PIK3C2AO00443 1686 aa13.09□□□□□ -0.31
SNIP1-204ENST00000638725 NWD1Q149M9 1564 aa13.09□□□□□ -0.31
SNIP1-204ENST00000638725 PTH1RQ03431 593 aa13.09□□□□□ -0.31
SNIP1-204ENST00000638725 HYPKQ9NX55 129 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms