RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	TYRO3	Q06418	890 aa		13.21	□□□□□ -0.3
STRADA-231	ENST00000638708	MAP3K11	Q16584	847 aa		13.21	□□□□□ -0.3
STRADA-231	ENST00000638708	HECW2	Q9P2P5	1572 aa		13.21	□□□□□ -0.3
STRADA-231	ENST00000638708	PIK3C2B	O00750	1634 aa		13.21	□□□□□ -0.3
STRADA-231	ENST00000638708	RBM6	P78332	1123 aa	Known RBP	13.2	□□□□□ -0.3
STRADA-231	ENST00000638708	GGT6	Q6P531	493 aa		13.2	□□□□□ -0.3
STRADA-231	ENST00000638708	TDRD7	Q8NHU6	1098 aa	Known RBP	13.2	□□□□□ -0.3
STRADA-231	ENST00000638708	TERF2IP	Q9NYB0	399 aa		13.2	□□□□□ -0.3
STRADA-231	ENST00000638708	ZNF215	Q9UL58	517 aa	Predicted RBP	13.2	□□□□□ -0.3
STRADA-231	ENST00000638708	RAD50	Q92878	1312 aa		13.2	□□□□□ -0.3
STRADA-231	ENST00000638708	MAP2	P11137	1827 aa	Known RBP	13.2	□□□□□ -0.3
STRADA-231	ENST00000638708	HSPA4	P34932	840 aa		13.2	□□□□□ -0.3
STRADA-231	ENST00000638708	HAP1	P54257	671 aa	Predicted RBP	13.2	□□□□□ -0.3
STRADA-231	ENST00000638708	DRC7	Q8IY82	874 aa		13.2	□□□□□ -0.3
STRADA-231	ENST00000638708	PHACTR3	Q96KR7	559 aa		13.2	□□□□□ -0.3
STRADA-231	ENST00000638708	NOL10	Q9BSC4	688 aa	Known RBP	13.2	□□□□□ -0.3
STRADA-231	ENST00000638708	NUP62CL	Q9H1M0	184 aa		13.2	□□□□□ -0.3
STRADA-231	ENST00000638708	PTPRC	P08575	1304 aa		13.19	□□□□□ -0.3
STRADA-231	ENST00000638708	ERBB3	P21860	1342 aa		13.19	□□□□□ -0.3
STRADA-231	ENST00000638708	NEMF	O60524	1076 aa		13.19	□□□□□ -0.3
STRADA-231	ENST00000638708	LUZP1	Q86V48	1076 aa		13.19	□□□□□ -0.3
STRADA-231	ENST00000638708	AEBP1	Q8IUX7	1158 aa		13.19	□□□□□ -0.3
STRADA-231	ENST00000638708	MEIS3	Q99687	375 aa		13.19	□□□□□ -0.3
STRADA-231	ENST00000638708	CHD2	O14647	1828 aa	Known RBP	13.19	□□□□□ -0.3
STRADA-231	ENST00000638708	TRIM6-TRIM34	B2RNG4	842 aa		13.18	□□□□□ -0.3
STRADA-231	ENST00000638708	TPRN	Q4KMQ1	711 aa		13.18	□□□□□ -0.3
STRADA-231	ENST00000638708	NYAP1	Q6ZVC0	841 aa		13.18	□□□□□ -0.3
STRADA-231	ENST00000638708	TTC14	Q96N46	770 aa		13.18	□□□□□ -0.3
STRADA-231	ENST00000638708	TRIM34	Q9BYJ4	488 aa		13.18	□□□□□ -0.3
STRADA-231	ENST00000638708	CBX8	Q9HC52	389 aa		13.18	□□□□□ -0.3
STRADA-231	ENST00000638708	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.18	□□□□□ -0.3
STRADA-231	ENST00000638708	SMC3	Q9UQE7	1217 aa		13.18	□□□□□ -0.3
STRADA-231	ENST00000638708	BMS1	Q14692	1282 aa	Known RBP	13.18	□□□□□ -0.3
STRADA-231	ENST00000638708	ELF2	Q15723	593 aa		13.18	□□□□□ -0.3
STRADA-231	ENST00000638708	CACTIN	Q8WUQ7	758 aa	Known RBP	13.18	□□□□□ -0.3
STRADA-231	ENST00000638708	NRBP1	Q9UHY1	535 aa		13.18	□□□□□ -0.3
STRADA-231	ENST00000638708	NEXMIF	Q5QGS0	1516 aa		13.17	□□□□□ -0.3
STRADA-231	ENST00000638708	IRX3	P78415	501 aa	Predicted RBP	13.17	□□□□□ -0.3
STRADA-231	ENST00000638708	DNM1	Q05193	864 aa	Known RBP	13.17	□□□□□ -0.3
STRADA-231	ENST00000638708	TRIM5	Q9C035	493 aa		13.17	□□□□□ -0.3
STRADA-231	ENST00000638708	AOX1	Q06278	1338 aa		13.17	□□□□□ -0.3
STRADA-231	ENST00000638708	SLU7	O95391	586 aa	Known RBP	13.17	□□□□□ -0.3
STRADA-231	ENST00000638708	KRT24	Q2M2I5	525 aa		13.17	□□□□□ -0.3
STRADA-231	ENST00000638708	ZNF592	Q92610	1267 aa		13.17	□□□□□ -0.3
STRADA-231	ENST00000638708	ST7	Q9NRC1	585 aa		13.17	□□□□□ -0.3
STRADA-231	ENST00000638708	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.17	□□□□□ -0.3
STRADA-231	ENST00000638708	LIMCH1	Q9UPQ0	1083 aa		13.17	□□□□□ -0.3
STRADA-231	ENST00000638708	MTMR6	Q9Y217	621 aa		13.17	□□□□□ -0.3
STRADA-231	ENST00000638708	ELP1	O95163	1332 aa		13.17	□□□□□ -0.3
STRADA-231	ENST00000638708	CHGA	P10645	457 aa	Known RBP	13.16	□□□□□ -0.3
STRADA-231	ENST00000638708	H2AFX	P16104	143 aa	Predicted RBP	13.16	□□□□□ -0.3
STRADA-231	ENST00000638708	HNRNPH2	P55795	449 aa	Known RBP	13.16	□□□□□ -0.3
STRADA-231	ENST00000638708	PTPN14	Q15678	1187 aa		13.16	□□□□□ -0.3
STRADA-231	ENST00000638708	ANO6	Q4KMQ2	910 aa		13.16	□□□□□ -0.3
STRADA-231	ENST00000638708	RBM43	Q6ZSC3	357 aa	Known RBP	13.16	□□□□□ -0.3
STRADA-231	ENST00000638708	ZNF446	Q9NWS9	450 aa		13.16	□□□□□ -0.3
STRADA-231	ENST00000638708	CLIP2	Q9UDT6	1046 aa		13.16	□□□□□ -0.3
STRADA-231	ENST00000638708	STAP2	Q9UGK3	403 aa		13.16	□□□□□ -0.3
STRADA-231	ENST00000638708	SETD1A	O15047	1707 aa	Known RBP	13.16	□□□□□ -0.3
STRADA-231	ENST00000638708	KIF2A	O00139	706 aa	Predicted RBP	13.15	□□□□□ -0.3
STRADA-231	ENST00000638708	AK2	P54819	239 aa		13.15	□□□□□ -0.3
STRADA-231	ENST00000638708	MUM1L1	Q5H9M0	696 aa		13.15	□□□□□ -0.3
STRADA-231	ENST00000638708	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.15	□□□□□ -0.3
STRADA-231	ENST00000638708	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
STRADA-231	ENST00000638708	RTF1	Q92541	710 aa	Known RBP	13.15	□□□□□ -0.3
STRADA-231	ENST00000638708	KCND1	Q9NSA2	647 aa		13.15	□□□□□ -0.3
STRADA-231	ENST00000638708	ITSN1	Q15811	1721 aa		13.15	□□□□□ -0.3
STRADA-231	ENST00000638708	HTATSF1	O43719	755 aa	Known RBP	13.15	□□□□□ -0.3
STRADA-231	ENST00000638708	RAD51AP2	Q09MP3	1159 aa		13.15	□□□□□ -0.3
STRADA-231	ENST00000638708	RUFY3	Q7L099	469 aa		13.15	□□□□□ -0.3
STRADA-231	ENST00000638708	EFCC1	Q9HA90	598 aa		13.15	□□□□□ -0.3
STRADA-231	ENST00000638708	HMOX1	P09601	288 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	SRPK2	P78362	688 aa	Known RBP	13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	CCDC144B	Q3MJ40	725 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	TSHZ3	Q63HK5	1081 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	CCDC144CP	Q8IYA2	1237 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	RILPL2	Q969X0	211 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	DDX19A	Q9NUU7	478 aa	Known RBP	13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
STRADA-231	ENST00000638708		V9GYY5	206 aa	Predicted RBP	13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	CRYBG1	Q9Y4K1	1723 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	DIP2B	Q9P265	1576 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	PTPRM	P28827	1452 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	ADGRL3	Q9HAR2	1447 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	AATK	Q6ZMQ8	1374 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	CAVIN2	O95810	425 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	SARM1	Q6SZW1	724 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	LRRC8A	Q8IWT6	810 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	LRRCC1	Q9C099	1032 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	TNMD	Q9H2S6	317 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	SNX14	Q9Y5W7	946 aa		13.14	□□□□□ -0.31
STRADA-231	ENST00000638708	NPAT	Q14207	1427 aa		13.13	□□□□□ -0.31
STRADA-231	ENST00000638708	TTC21B	Q7Z4L5	1316 aa		13.13	□□□□□ -0.31
STRADA-231	ENST00000638708	GJB2	P29033	226 aa		13.13	□□□□□ -0.31
STRADA-231	ENST00000638708	KRT85	P78386	507 aa		13.13	□□□□□ -0.31
STRADA-231	ENST00000638708	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.13	□□□□□ -0.31
STRADA-231	ENST00000638708	TXLNB	Q8N3L3	684 aa		13.13	□□□□□ -0.31
STRADA-231	ENST00000638708	POLK	Q9UBT6	870 aa		13.13	□□□□□ -0.31
STRADA-231	ENST00000638708	FHOD1	Q9Y613	1164 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms