RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 ERICH6BQ5W0A0 696 aa17.08■□□□□ 0.32
LINC00643-207ENST00000637212 PTF1AQ7RTS3 328 aa17.08■□□□□ 0.32
LINC00643-207ENST00000637212 NECTIN2Q92692 538 aa17.08■□□□□ 0.32
LINC00643-207ENST00000637212 SLC4A9Q96Q91 983 aa17.08■□□□□ 0.32
LINC00643-207ENST00000637212 DNAJC10Q8IXB1 793 aa17.07■□□□□ 0.32
LINC00643-207ENST00000637212 CHPF2Q9P2E5 772 aa17.07■□□□□ 0.32
LINC00643-207ENST00000637212 TRIM37O94972 964 aa17.06■□□□□ 0.32
LINC00643-207ENST00000637212 CYP19A1P11511 503 aaPredicted RBP17.06■□□□□ 0.32
LINC00643-207ENST00000637212 ATP6V1AP38606 617 aa17.06■□□□□ 0.32
LINC00643-207ENST00000637212 DZIP1LQ8IYY4 767 aaKnown RBP17.06■□□□□ 0.32
LINC00643-207ENST00000637212 FLIIQ13045 1269 aa17.05■□□□□ 0.32
LINC00643-207ENST00000637212 A1BGP04217 495 aa17.04■□□□□ 0.32
LINC00643-207ENST00000637212 TRIM27P14373 513 aa17.04■□□□□ 0.32
LINC00643-207ENST00000637212 G2E3Q7L622 706 aa17.04■□□□□ 0.32
LINC00643-207ENST00000637212 PAPPAQ13219 1627 aa17.03■□□□□ 0.32
LINC00643-207ENST00000637212 PLSCR1O15162 318 aa17.03■□□□□ 0.32
LINC00643-207ENST00000637212 SLC27A3Q5K4L6 730 aa17.03■□□□□ 0.32
LINC00643-207ENST00000637212 DOT1LQ8TEK3 1739 aa17.02■□□□□ 0.32
LINC00643-207ENST00000637212 NBPF26B4DH59 902 aa17.02■□□□□ 0.32
LINC00643-207ENST00000637212 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.32
LINC00643-207ENST00000637212 PROSER3Q2NL68 480 aa17.02■□□□□ 0.32
LINC00643-207ENST00000637212 NBPF14Q5TI25 921 aa17.02■□□□□ 0.32
LINC00643-207ENST00000637212 NBPF10Q6P3W6 841 aaKnown RBP17.02■□□□□ 0.32
LINC00643-207ENST00000637212 LRP10Q7Z4F1 713 aa17.02■□□□□ 0.32
LINC00643-207ENST00000637212 FTSJ3Q8IY81 847 aaKnown RBP17.02■□□□□ 0.32
LINC00643-207ENST00000637212 NBPF15Q8N660 670 aa17.02■□□□□ 0.32
LINC00643-207ENST00000637212 PHAXQ9H814 394 aaKnown RBP17.02■□□□□ 0.32
LINC00643-207ENST00000637212 ITGB4P16144 1822 aa17.02■□□□□ 0.31
LINC00643-207ENST00000637212 VIRMAQ69YN4 1812 aaKnown RBP17.01■□□□□ 0.31
LINC00643-207ENST00000637212 MYL6BP14649 208 aa17.01■□□□□ 0.31
LINC00643-207ENST00000637212 FKBP5Q13451 457 aaPredicted RBP17.01■□□□□ 0.31
LINC00643-207ENST00000637212 ITPK1Q13572 414 aa17.01■□□□□ 0.31
LINC00643-207ENST00000637212 AAMPQ13685 434 aa17.01■□□□□ 0.31
LINC00643-207ENST00000637212 FKBP8Q14318 412 aa17.01■□□□□ 0.31
LINC00643-207ENST00000637212 RC3H1Q5TC82 1133 aaKnown RBP17.01■□□□□ 0.31
LINC00643-207ENST00000637212 C20orf194Q5TEA3 1177 aa17.01■□□□□ 0.31
LINC00643-207ENST00000637212 UBR2Q8IWV8 1755 aa17■□□□□ 0.31
LINC00643-207ENST00000637212 INTS5Q6P9B9 1019 aaKnown RBP17■□□□□ 0.31
LINC00643-207ENST00000637212 KSR2Q6VAB6 950 aa17■□□□□ 0.31
LINC00643-207ENST00000637212 COPS6Q7L5N1 327 aa17■□□□□ 0.31
LINC00643-207ENST00000637212 PANK1Q8TE04 598 aa17■□□□□ 0.31
LINC00643-207ENST00000637212 CCDC87Q9NVE4 849 aa17■□□□□ 0.31
LINC00643-207ENST00000637212 CCNL1Q9UK58 526 aaPredicted RBP17■□□□□ 0.31
LINC00643-207ENST00000637212 NHSQ6T4R5 1651 aa17■□□□□ 0.31
LINC00643-207ENST00000637212 ABCC4O15439 1325 aa16.99■□□□□ 0.31
LINC00643-207ENST00000637212 APBA3O96018 575 aa16.99■□□□□ 0.31
LINC00643-207ENST00000637212 ANXA1P04083 346 aa16.99■□□□□ 0.31
LINC00643-207ENST00000637212 IL6STP40189 918 aaPredicted RBP16.99■□□□□ 0.31
LINC00643-207ENST00000637212 INTS3Q68E01 1043 aaKnown RBP16.99■□□□□ 0.31
LINC00643-207ENST00000637212 XAGE3Q8WTP9 111 aa16.99■□□□□ 0.31
LINC00643-207ENST00000637212 CLUAP1Q96AJ1 413 aa16.99■□□□□ 0.31
LINC00643-207ENST00000637212 CHMP4BQ9H444 224 aaKnown RBP16.99■□□□□ 0.31
LINC00643-207ENST00000637212 RLBP1P12271 317 aa16.98■□□□□ 0.31
LINC00643-207ENST00000637212 CRKLP46109 303 aaKnown RBP16.98■□□□□ 0.31
LINC00643-207ENST00000637212 CCT4P50991 539 aaKnown RBP16.98■□□□□ 0.31
LINC00643-207ENST00000637212 MVPQ14764 893 aaKnown RBP16.98■□□□□ 0.31
LINC00643-207ENST00000637212 ANKRD13DQ6ZTN6 518 aa16.98■□□□□ 0.31
LINC00643-207ENST00000637212 GTF3C3Q9Y5Q9 886 aa16.98■□□□□ 0.31
LINC00643-207ENST00000637212 CNTNAP4Q9C0A0 1308 aa16.97■□□□□ 0.31
LINC00643-207ENST00000637212 PI4KAP2A4QPH2 592 aa16.97■□□□□ 0.31
LINC00643-207ENST00000637212 IRX6P78412 446 aaPredicted RBP16.97■□□□□ 0.31
LINC00643-207ENST00000637212 PI4KAP1Q8N8J0 262 aa16.97■□□□□ 0.31
LINC00643-207ENST00000637212 PLBD2Q8NHP8 589 aa16.97■□□□□ 0.31
LINC00643-207ENST00000637212 CRBNQ96SW2 442 aa16.97■□□□□ 0.31
LINC00643-207ENST00000637212 TNNQ9UQP3 1299 aa16.97■□□□□ 0.31
LINC00643-207ENST00000637212 BRWD3Q6RI45 1802 aa16.96■□□□□ 0.31
LINC00643-207ENST00000637212 EIF5P55010 431 aaKnown RBP16.96■□□□□ 0.31
LINC00643-207ENST00000637212 AIMP1Q12904 312 aaKnown RBP16.96■□□□□ 0.31
LINC00643-207ENST00000637212 NPM2Q86SE8 214 aaKnown RBP16.96■□□□□ 0.31
LINC00643-207ENST00000637212 CCDC125Q86Z20 511 aa16.96■□□□□ 0.31
LINC00643-207ENST00000637212 TMEM57Q8N5G2 664 aa16.96■□□□□ 0.31
LINC00643-207ENST00000637212 LINC00116Q8NCU8 138 aa16.96■□□□□ 0.31
LINC00643-207ENST00000637212 DNAAF4Q8WXU2 420 aa16.96■□□□□ 0.31
LINC00643-207ENST00000637212 DDX19BQ9UMR2 479 aa16.96■□□□□ 0.31
LINC00643-207ENST00000637212 COG6Q9Y2V7 657 aa16.96■□□□□ 0.31
LINC00643-207ENST00000637212 A0A087WZG4 1122 aa16.95■□□□□ 0.3
LINC00643-207ENST00000637212 PIP4K2AP48426 406 aaPredicted RBP16.95■□□□□ 0.3
LINC00643-207ENST00000637212 RIC3Q7Z5B4 369 aa16.95■□□□□ 0.3
LINC00643-207ENST00000637212 EXOC6Q8TAG9 804 aa16.95■□□□□ 0.3
LINC00643-207ENST00000637212 ZBTB1Q9Y2K1 713 aa16.95■□□□□ 0.3
LINC00643-207ENST00000637212 EP400Q96L91 3159 aa16.94■□□□□ 0.3
LINC00643-207ENST00000637212 F6X3S4 739 aa16.94■□□□□ 0.3
LINC00643-207ENST00000637212 RPS6KA4O75676 772 aa16.94■□□□□ 0.3
LINC00643-207ENST00000637212 TXNRD1Q16881 649 aa16.94■□□□□ 0.3
LINC00643-207ENST00000637212 PROM2Q8N271 834 aa16.94■□□□□ 0.3
LINC00643-207ENST00000637212 LRRC4BQ9NT99 713 aa16.94■□□□□ 0.3
LINC00643-207ENST00000637212 MAP3K2Q9Y2U5 619 aa16.94■□□□□ 0.3
LINC00643-207ENST00000637212 ZNF831Q5JPB2 1677 aa16.94■□□□□ 0.3
LINC00643-207ENST00000637212 ERVV-1B6SEH8 477 aa16.93■□□□□ 0.3
LINC00643-207ENST00000637212 ZBTB7BO15156 539 aaPredicted RBP16.93■□□□□ 0.3
LINC00643-207ENST00000637212 SF3B2Q13435 895 aaKnown RBP16.93■□□□□ 0.3
LINC00643-207ENST00000637212 SLC4A10Q6U841 1118 aa16.93■□□□□ 0.3
LINC00643-207ENST00000637212 KIF6Q6ZMV9 814 aa16.93■□□□□ 0.3
LINC00643-207ENST00000637212 ITPRIPQ8IWB1 547 aa16.93■□□□□ 0.3
LINC00643-207ENST00000637212 METTL22Q9BUU2 404 aaPredicted RBP16.93■□□□□ 0.3
LINC00643-207ENST00000637212 ADCY9O60503 1353 aa16.92■□□□□ 0.3
LINC00643-207ENST00000637212 RGL2O15211 777 aa16.92■□□□□ 0.3
LINC00643-207ENST00000637212 ALDH1L1O75891 902 aa16.92■□□□□ 0.3
LINC00643-207ENST00000637212 KCNQ4P56696 695 aa16.92■□□□□ 0.3
LINC00643-207ENST00000637212 NEXNQ0ZGT2 675 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms